| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006189
Identifier: 150006189
GI number: 150006189
Start: 4570536
End: 4572872
Strand: Reverse
Name: 150006189
Synonym: BVU_3700
Alternate gene names: NA
Gene position: 4572872-4570536 (Counterclockwise)
Preceding gene: 150006190
Following gene: 150006188
Centisome position: 88.57
GC content: 56.18
Gene sequence:
>2337_bases ATGACATTTCATGCATATCTCCAGTATGTGTGCCTGCTTGTTGTCTGCCTATGTACCCTCCCTTCTCCCATGGAAGCACG GGTACAGGCTGACCGGCAATCGACGGGTACACGCGATACTCTGCTGGTCATTGACCAGGAAAGCGGGCTTCCCATTGAAG GGGCCTATATCCTGACCAGGGAACGGTTACTTGTCAGCTCCCCCCGTGGAATGATTGTTTTCGGTCATGGAACGTGTTTC ATGGATACGGTCCTCGTGCAGTGCCTGGGTTACGGTTCCCGGCGTGTGCCTTTGAACGAGGTATTCAAAGAAAGCAGCAT ACATACCGTATGTCTCTCCCCGGACATACAAAAACTCGGGGAAGTGGTCGTGACCGGTGAACGTGCCGGGGCGTCACCCA ACGTGGTGAGCCGGCGCCTTTCATCTCCCGAGATCAGGAACGCGCTGGGAACCTCGCTTGCCACCCTGCTCGAACGTGTC AGCGGGGTAAGTTCCATCAGCACGGGAACCACTGTATCCAAACCCGTTATCCAAGGAATGTACGGGAACCGGATACTGAT TATCCATAACGGTGCCCGCCAGACCGGGCAGCAATGGGGGGCCGACCACACTCCCGAAGTGGACATGAACGGCAGCTCCT CTGTTTCGGTAATCAAGGGCTCCGATGCGGTAAGATACGGTTCGGATGCCCTTGGAGGGATTATCGTCATGGAGCAGTCT CCGCTTCCTTTCAGAAAACGCTCCCTTCAAGGGGGAATCTCCGCACTTTACGGAAGTAACGGGCGTCGCTACGTGGCTAC CGGACAGCTCGAAGGTGCTTTTCCCGGTGATTTCGCCTGGCGTCTGCAGGGAACCTGGTCAAATTCCGGGGACCGTTCCA CTGCGCACTATCTTCTGAACAACACGGGAACCAGAGAGTATCACGCTTCCGCCTCTCTGGGCTATGACCGCGGACGTCTG AGAGTGGAAGGTTTCTACAGCCGCTTCTACAGCCGGACAGGGGTGATGCTCAGCGCCCAGATGGGTAGCGAGGACCTGCT GGCGGAACGTATCCGGCTTGGTCGCCCCCTGCACACGGATCCCTTCTCCCGTGGTATCAGGGCTCCCTGCCAGGAGGTCA CCCATCAGATCACATTCGGCAGGATGCGGCTCGGCATGAAGAAGGGGGGAAGTATTCACTGGCAAAGTACCTGGCAGAAG GACGATAGGCAGGAAAACCGTGTCCGGCGGCTGGATTCTAACATTCCGGCGGTTTCCCTGCACCTGAATTCATTCCAGCA TCTTCTGCGTTGGAAGCGGGATTACCGCTCCTGGCAAGTCGAGGCGGGAGGTCAGGTCATGTTCATCGAGAACCACAGCC GCGCGGGTACCGGATTCGTGCCCGTTATCCCGAACTACACGGAGACACAGGCAGGGATATACGGAATCGGGAAATATCAC CTGGCCAGGGGAGGCGTTGAAGCAGGCCTCCGCCTGGATATGCAGGAAACCCGTGCCAGTGGTTATGACTGGACGGGAAG CCCCTATGGCGGGACAAGAAAGTTTAACAACGTGTCCTACAGCCTGGGAGGACACTATCAACTTTCCAGACGCTGGAGGC TCACCTCCAACTTCGGTCTGGCTTGGCGTGCCCCTCACGTGTATGAACTGTACAGCAACGGGAACGAGCTCGGGTCTGGG ATGTTTGTCAGGGGAGACTCTGCGATGCACTCGGAAAGAAGCTACAAATGGATATCTTCCCTCCGTTACGGCGACGGGAT GTTCAGCGTCTGTCTGGACGGTTACCTGCAATGGGTGGACGGCTATATCTATGACGGGCCGGAGAAAGAGACAGTCACCG TGATTTCGGGAGCATACCCGGTCTTCCAGTACAGGCAGACCCCGGCTTTCTTCCGCGGTATGGACTTTGACCTGCGTTTC ACTCCGGGCGGTTCATGGGACTACCATGCCGTCGTCTCCTTTATACGGGCAAACGAACGGACAAAGGGTAATTATCTTCC TTATATTCCCTCCTTCCGTTTCAGCCATGAACTTGCGTGGATACACGAGACGAAATCGCATCTCAGGCTGCGTCTGAACA TCAGGCACCGTTTCACCGCAAAACAGAGGCGGTTTGATCCGGACACGGATCTTATCCCGTATACTCCCCCGGCGTACCAT CTCCTCGGGTTCGACGCTGCTCTTGAACTTCCCGTGAAACGGGGACACCAGGTCCGGTTCATGCTGTCGGCAGACAACCT CCTGAATCGTGAGTACAAGGAATACACCAACCGCTCGCGTTACTATGCGCATGATATGGGACGTGATGTGCGTTGCGGTG TAAACTGGATTTTTTAA
Upstream 100 bases:
>100_bases TAACTCCCTTGAGGGATTCGCATGCCATCACTGTGATTGCGTGCAGGGGCTTTTCATGTCCTGTCTTAACAGATTATAAC CCGTTTATATTTTTTCAAGT
Downstream 100 bases:
>100_bases TTTATAACAACTATAATCAACACTAATAAATAAAAAGAAAAATGAGAACAATTGCATGTAAAACCGTGTGGGCACTTCTG ATAGGAGTGTCCCTTGTCCT
Product: putative outer membrane protein
Products: NA
Alternate protein names: NB Dependent Receptor; Nb-Dependent Receptor Plug; NB-Dependent Receptor-Like Protein; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor; Hemin Receptor; Outer Membrane Hemin Receptor; Outer Membrane Receptor Protein; NB-Dependent Outer Membrane Hemin Receptor; NB Dependent/Ligand-Gated Channel; NB-Dependent Heme Receptor; NB-Linked Outer Membrane Receptor; Outer Membrane Receptor nB Dependent; NB-Dependent Outer Membrane Hemin Receptor PhuR; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 778; Mature: 777
Protein sequence:
>778_residues MTFHAYLQYVCLLVVCLCTLPSPMEARVQADRQSTGTRDTLLVIDQESGLPIEGAYILTRERLLVSSPRGMIVFGHGTCF MDTVLVQCLGYGSRRVPLNEVFKESSIHTVCLSPDIQKLGEVVVTGERAGASPNVVSRRLSSPEIRNALGTSLATLLERV SGVSSISTGTTVSKPVIQGMYGNRILIIHNGARQTGQQWGADHTPEVDMNGSSSVSVIKGSDAVRYGSDALGGIIVMEQS PLPFRKRSLQGGISALYGSNGRRYVATGQLEGAFPGDFAWRLQGTWSNSGDRSTAHYLLNNTGTREYHASASLGYDRGRL RVEGFYSRFYSRTGVMLSAQMGSEDLLAERIRLGRPLHTDPFSRGIRAPCQEVTHQITFGRMRLGMKKGGSIHWQSTWQK DDRQENRVRRLDSNIPAVSLHLNSFQHLLRWKRDYRSWQVEAGGQVMFIENHSRAGTGFVPVIPNYTETQAGIYGIGKYH LARGGVEAGLRLDMQETRASGYDWTGSPYGGTRKFNNVSYSLGGHYQLSRRWRLTSNFGLAWRAPHVYELYSNGNELGSG MFVRGDSAMHSERSYKWISSLRYGDGMFSVCLDGYLQWVDGYIYDGPEKETVTVISGAYPVFQYRQTPAFFRGMDFDLRF TPGGSWDYHAVVSFIRANERTKGNYLPYIPSFRFSHELAWIHETKSHLRLRLNIRHRFTAKQRRFDPDTDLIPYTPPAYH LLGFDAALELPVKRGHQVRFMLSADNLLNREYKEYTNRSRYYAHDMGRDVRCGVNWIF
Sequences:
>Translated_778_residues MTFHAYLQYVCLLVVCLCTLPSPMEARVQADRQSTGTRDTLLVIDQESGLPIEGAYILTRERLLVSSPRGMIVFGHGTCF MDTVLVQCLGYGSRRVPLNEVFKESSIHTVCLSPDIQKLGEVVVTGERAGASPNVVSRRLSSPEIRNALGTSLATLLERV SGVSSISTGTTVSKPVIQGMYGNRILIIHNGARQTGQQWGADHTPEVDMNGSSSVSVIKGSDAVRYGSDALGGIIVMEQS PLPFRKRSLQGGISALYGSNGRRYVATGQLEGAFPGDFAWRLQGTWSNSGDRSTAHYLLNNTGTREYHASASLGYDRGRL RVEGFYSRFYSRTGVMLSAQMGSEDLLAERIRLGRPLHTDPFSRGIRAPCQEVTHQITFGRMRLGMKKGGSIHWQSTWQK DDRQENRVRRLDSNIPAVSLHLNSFQHLLRWKRDYRSWQVEAGGQVMFIENHSRAGTGFVPVIPNYTETQAGIYGIGKYH LARGGVEAGLRLDMQETRASGYDWTGSPYGGTRKFNNVSYSLGGHYQLSRRWRLTSNFGLAWRAPHVYELYSNGNELGSG MFVRGDSAMHSERSYKWISSLRYGDGMFSVCLDGYLQWVDGYIYDGPEKETVTVISGAYPVFQYRQTPAFFRGMDFDLRF TPGGSWDYHAVVSFIRANERTKGNYLPYIPSFRFSHELAWIHETKSHLRLRLNIRHRFTAKQRRFDPDTDLIPYTPPAYH LLGFDAALELPVKRGHQVRFMLSADNLLNREYKEYTNRSRYYAHDMGRDVRCGVNWIF >Mature_777_residues TFHAYLQYVCLLVVCLCTLPSPMEARVQADRQSTGTRDTLLVIDQESGLPIEGAYILTRERLLVSSPRGMIVFGHGTCFM DTVLVQCLGYGSRRVPLNEVFKESSIHTVCLSPDIQKLGEVVVTGERAGASPNVVSRRLSSPEIRNALGTSLATLLERVS GVSSISTGTTVSKPVIQGMYGNRILIIHNGARQTGQQWGADHTPEVDMNGSSSVSVIKGSDAVRYGSDALGGIIVMEQSP LPFRKRSLQGGISALYGSNGRRYVATGQLEGAFPGDFAWRLQGTWSNSGDRSTAHYLLNNTGTREYHASASLGYDRGRLR VEGFYSRFYSRTGVMLSAQMGSEDLLAERIRLGRPLHTDPFSRGIRAPCQEVTHQITFGRMRLGMKKGGSIHWQSTWQKD DRQENRVRRLDSNIPAVSLHLNSFQHLLRWKRDYRSWQVEAGGQVMFIENHSRAGTGFVPVIPNYTETQAGIYGIGKYHL ARGGVEAGLRLDMQETRASGYDWTGSPYGGTRKFNNVSYSLGGHYQLSRRWRLTSNFGLAWRAPHVYELYSNGNELGSGM FVRGDSAMHSERSYKWISSLRYGDGMFSVCLDGYLQWVDGYIYDGPEKETVTVISGAYPVFQYRQTPAFFRGMDFDLRFT PGGSWDYHAVVSFIRANERTKGNYLPYIPSFRFSHELAWIHETKSHLRLRLNIRHRFTAKQRRFDPDTDLIPYTPPAYHL LGFDAALELPVKRGHQVRFMLSADNLLNREYKEYTNRSRYYAHDMGRDVRCGVNWIF
Specific function: Unknown
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87706; Mature: 87575
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFHAYLQYVCLLVVCLCTLPSPMEARVQADRQSTGTRDTLLVIDQESGLPIEGAYILTR CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEE ERLLVSSPRGMIVFGHGTCFMDTVLVQCLGYGSRRVPLNEVFKESSIHTVCLSPDIQKLG CCCEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCCHHHCC EVVVTGERAGASPNVVSRRLSSPEIRNALGTSLATLLERVSGVSSISTGTTVSKPVIQGM CEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC YGNRILIIHNGARQTGQQWGADHTPEVDMNGSSSVSVIKGSDAVRYGSDALGGIIVMEQS CCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCEEEEECC PLPFRKRSLQGGISALYGSNGRRYVATGQLEGAFPGDFAWRLQGTWSNSGDRSTAHYLLN CCCHHHHHHHCCHHEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEC NTGTREYHASASLGYDRGRLRVEGFYSRFYSRTGVMLSAQMGSEDLLAERIRLGRPLHTD CCCCCEEECCCCCCCCCCCEEEHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCC PFSRGIRAPCQEVTHQITFGRMRLGMKKGGSIHWQSTWQKDDRQENRVRRLDSNIPAVSL HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEE HLNSFQHLLRWKRDYRSWQVEAGGQVMFIENHSRAGTGFVPVIPNYTETQAGIYGIGKYH EHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCCCCEEECCCCCCCCCCCEEECCHHH LARGGVEAGLRLDMQETRASGYDWTGSPYGGTRKFNNVSYSLGGHYQLSRRWRLTSNFGL HCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCE AWRAPHVYELYSNGNELGSGMFVRGDSAMHSERSYKWISSLRYGDGMFSVCLDGYLQWVD EECCCEEEEECCCCCCCCCCEEEECCCHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHC GYIYDGPEKETVTVISGAYPVFQYRQTPAFFRGMDFDLRFTPGGSWDYHAVVSFIRANER CEEECCCCCCEEEEEECCCCEEEECCCCHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCC TKGNYLPYIPSFRFSHELAWIHETKSHLRLRLNIRHRFTAKQRRFDPDTDLIPYTPPAYH CCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCE LLGFDAALELPVKRGHQVRFMLSADNLLNREYKEYTNRSRYYAHDMGRDVRCGVNWIF EEECCCEEECCCCCCCEEEEEEECCHHHHHHHHHHCCCCCEEHHHCCCCEECCCEECC >Mature Secondary Structure TFHAYLQYVCLLVVCLCTLPSPMEARVQADRQSTGTRDTLLVIDQESGLPIEGAYILTR CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEE ERLLVSSPRGMIVFGHGTCFMDTVLVQCLGYGSRRVPLNEVFKESSIHTVCLSPDIQKLG CCCEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEECCCHHHCC EVVVTGERAGASPNVVSRRLSSPEIRNALGTSLATLLERVSGVSSISTGTTVSKPVIQGM CEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCC YGNRILIIHNGARQTGQQWGADHTPEVDMNGSSSVSVIKGSDAVRYGSDALGGIIVMEQS CCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCEEEEECC PLPFRKRSLQGGISALYGSNGRRYVATGQLEGAFPGDFAWRLQGTWSNSGDRSTAHYLLN CCCHHHHHHHCCHHEEECCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEC NTGTREYHASASLGYDRGRLRVEGFYSRFYSRTGVMLSAQMGSEDLLAERIRLGRPLHTD CCCCCEEECCCCCCCCCCCEEEHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCC PFSRGIRAPCQEVTHQITFGRMRLGMKKGGSIHWQSTWQKDDRQENRVRRLDSNIPAVSL HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEE HLNSFQHLLRWKRDYRSWQVEAGGQVMFIENHSRAGTGFVPVIPNYTETQAGIYGIGKYH EHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCCCCCEEECCCCCCCCCCCEEECCHHH LARGGVEAGLRLDMQETRASGYDWTGSPYGGTRKFNNVSYSLGGHYQLSRRWRLTSNFGL HCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCCE AWRAPHVYELYSNGNELGSGMFVRGDSAMHSERSYKWISSLRYGDGMFSVCLDGYLQWVD EECCCEEEEECCCCCCCCCCEEEECCCHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHC GYIYDGPEKETVTVISGAYPVFQYRQTPAFFRGMDFDLRFTPGGSWDYHAVVSFIRANER CEEECCCCCCEEEEEECCCCEEEECCCCHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCC TKGNYLPYIPSFRFSHELAWIHETKSHLRLRLNIRHRFTAKQRRFDPDTDLIPYTPPAYH CCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCE LLGFDAALELPVKRGHQVRFMLSADNLLNREYKEYTNRSRYYAHDMGRDVRCGVNWIF EEECCCEEECCCCCCCEEEEEEECCHHHHHHHHHHCCCCCEEHHHCCCCEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA