| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is hipA [C]
Identifier: 150006182
GI number: 150006182
Start: 4565620
End: 4566549
Strand: Reverse
Name: hipA [C]
Synonym: BVU_3693
Alternate gene names: 150006182
Gene position: 4566549-4565620 (Counterclockwise)
Preceding gene: 150006183
Following gene: 150006178
Centisome position: 88.44
GC content: 41.51
Gene sequence:
>930_bases ATGTGTAATTGCTTATATTGTTATCGTCCGCTCTTAAAGGGGGAAAAGGACATGCACACGGCTTGCATAAAAAAGTTTTT CGGAACAACGACATTGCCTGTTCTTGATTATACGACAGAACAACTTGATCAGCTTGCTCTGCAAATCATTCAAGAACAAA CCTCTTTGACCGGTGTTCAGCCGAAATTATCCTTGCATTTGAAGGAACATGAGGGCTGTAAAAGATTGACTATTGTCGGG CTATGGGGCGGTTATATTTGTAAACCACAGACCTCGCAATATGAAATGATGCCTGAGGTTGAGGATTTAACCATGCACCT TGCTGAGGTGGCACGTATTGAGGTTGTTCCTCATACGCTGATGCGGATGGCAGATGATACGCTATGCTATCTTACCCGCC GGATAGACAGGACTTCTACCGGAGAGAAGATTGCGATGGAAGATATGTGCCAACTGACGGAAAGGCAAACAGAGCACAAA TACAAGAGCAGTTATGAACGTGTCGGCAAGGTCGTTTTGAAATACTCGTCTTTACCAAAGATGGATGTTACCAATTTCTT TGAGTTGGTGCTTTTCTCTTGGTTGACAGGGAATAACGACATGCACTTGAAAAACTTCTCTTTGTATGAGGTGGCGGATA AGATACGTTTAACCCCTGCTTATGATTTGCTAAATGCGGCTATCATCAATCCCAAGGATGACGAAGAGTTGGCATTGACT TTGAATGGTCGGAAGAAAAAGCTTCAAAGAGAGGATTTTATTCGATCAGCTTCCATGCTAGGTATAGAGAATGTGATTGT AGAACGACTGATAAATAAATATATCAAACTATTGCCCAAGTTTGAGACTATCATTCAAAACTCTTTCCTAAGTGCTGAAT TAAAAGAAAAGTATGGCGAATTATTGAAAGGACGGCTTGCGAGGCTTTAA
Upstream 100 bases:
>100_bases GACATCAGTATTCTTGACCGGATGTCGTTGTTGCTGACATGCTGCAAGGATTGTATCGGAGCAGTAAGCGTTATTCCATT GGAAGAAAAGGAGGGAAGCC
Downstream 100 bases:
>100_bases CAAAGACTATAAAACGGTAAAATACACAATGCTTAGAATATTCTTCCTTGTAGCTTTTATGGTACATCGGAGGGACAGTT ATTCGAAAATTTCGAATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MCNCLYCYRPLLKGEKDMHTACIKKFFGTTTLPVLDYTTEQLDQLALQIIQEQTSLTGVQPKLSLHLKEHEGCKRLTIVG LWGGYICKPQTSQYEMMPEVEDLTMHLAEVARIEVVPHTLMRMADDTLCYLTRRIDRTSTGEKIAMEDMCQLTERQTEHK YKSSYERVGKVVLKYSSLPKMDVTNFFELVLFSWLTGNNDMHLKNFSLYEVADKIRLTPAYDLLNAAIINPKDDEELALT LNGRKKKLQREDFIRSASMLGIENVIVERLINKYIKLLPKFETIIQNSFLSAELKEKYGELLKGRLARL
Sequences:
>Translated_309_residues MCNCLYCYRPLLKGEKDMHTACIKKFFGTTTLPVLDYTTEQLDQLALQIIQEQTSLTGVQPKLSLHLKEHEGCKRLTIVG LWGGYICKPQTSQYEMMPEVEDLTMHLAEVARIEVVPHTLMRMADDTLCYLTRRIDRTSTGEKIAMEDMCQLTERQTEHK YKSSYERVGKVVLKYSSLPKMDVTNFFELVLFSWLTGNNDMHLKNFSLYEVADKIRLTPAYDLLNAAIINPKDDEELALT LNGRKKKLQREDFIRSASMLGIENVIVERLINKYIKLLPKFETIIQNSFLSAELKEKYGELLKGRLARL >Mature_309_residues MCNCLYCYRPLLKGEKDMHTACIKKFFGTTTLPVLDYTTEQLDQLALQIIQEQTSLTGVQPKLSLHLKEHEGCKRLTIVG LWGGYICKPQTSQYEMMPEVEDLTMHLAEVARIEVVPHTLMRMADDTLCYLTRRIDRTSTGEKIAMEDMCQLTERQTEHK YKSSYERVGKVVLKYSSLPKMDVTNFFELVLFSWLTGNNDMHLKNFSLYEVADKIRLTPAYDLLNAAIINPKDDEELALT LNGRKKKLQREDFIRSASMLGIENVIVERLINKYIKLLPKFETIIQNSFLSAELKEKYGELLKGRLARL
Specific function: Unbalanced Or Excessive Expression Of Hipa Is Toxic To The Cell. [C]
COG id: COG3550
COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli hipA [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012893 - InterPro: IPR012894 [H]
Pfam domain/function: PF07804 HipA_C; PF07805 HipA_N [H]
EC number: NA
Molecular weight: Translated: 35716; Mature: 35716
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNCLYCYRPLLKGEKDMHTACIKKFFGTTTLPVLDYTTEQLDQLALQIIQEQTSLTGVQ CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCC PKLSLHLKEHEGCKRLTIVGLWGGYICKPQTSQYEMMPEVEDLTMHLAEVARIEVVPHTL CHHEEEECCCCCCCEEEEEEECCCEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHH MRMADDTLCYLTRRIDRTSTGEKIAMEDMCQLTERQTEHKYKSSYERVGKVVLKYSSLPK HHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC MDVTNFFELVLFSWLTGNNDMHLKNFSLYEVADKIRLTPAYDLLNAAIINPKDDEELALT CCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEE LNGRKKKLQREDFIRSASMLGIENVIVERLINKYIKLLPKFETIIQNSFLSAELKEKYGE ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKGRLARL HHHHHHHCC >Mature Secondary Structure MCNCLYCYRPLLKGEKDMHTACIKKFFGTTTLPVLDYTTEQLDQLALQIIQEQTSLTGVQ CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCC PKLSLHLKEHEGCKRLTIVGLWGGYICKPQTSQYEMMPEVEDLTMHLAEVARIEVVPHTL CHHEEEECCCCCCCEEEEEEECCCEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHH MRMADDTLCYLTRRIDRTSTGEKIAMEDMCQLTERQTEHKYKSSYERVGKVVLKYSSLPK HHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC MDVTNFFELVLFSWLTGNNDMHLKNFSLYEVADKIRLTPAYDLLNAAIINPKDDEELALT CCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEE LNGRKKKLQREDFIRSASMLGIENVIVERLINKYIKLLPKFETIIQNSFLSAELKEKYGE ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKGRLARL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]