| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is nupG [H]
Identifier: 150006104
GI number: 150006104
Start: 4478912
End: 4480189
Strand: Reverse
Name: nupG [H]
Synonym: BVU_3613
Alternate gene names: 150006104
Gene position: 4480189-4478912 (Counterclockwise)
Preceding gene: 150006105
Following gene: 150006103
Centisome position: 86.77
GC content: 43.97
Gene sequence:
>1278_bases ATGAAAAACGAAATTACCGGAATGAGACTCAGACTGATAGTCATGAACTTCTTGCAGTTTGCCGTATGGGGGGCTTATCT TACTTCCATGGGGACGTATTTGTTTAATATTGGCTTGGGGGCCAAGATAGGTCTGTTTTACGCCATGCAGGGGATTGTTT CCTTGTTTATGCCTGCCATAATGGGAATTATTGCCGACAGGTGGGTGCCTGCTCAAAAATTATATGGTTTCTGTCATTTT ATGGCTGCCGTGTTTATGGTGGCTGCCGGGTGGTATGGCTATGTGGATGGTGAAGCGGTTAATTTCGGTACTTTGTTTAC ATTTTATTCTCTTAGTGTAGCTTTTTATATGCCAACATTGGCTTTGACAAATTCGGTAGCCTATACCGCACTGGATAAAG TAAAACTGGACCCTGTCATCGCTTTTCCTCCCATCCGTATTTTCGGAACGATTGGTTTCATCTGCTCCATGTTGCTGACG GATATCTTGGGATTCCAAAATAATTATATGCAGTTTTTTTCTTGTGCTTGCTTTGGAGTGATACTGGCGGTTTATGCGCT TACTTTGCCTGAGTGTCCTGTAAGTCGTGGTGGAGAACAGAAATCGTTGGTAGATGCTATGGGATTACGGGCGTTTACAC TGTTCAAACAGAAAAAGATGGCTATTTTCTTTATATTTTCTATGTTGTTGGGGGTTTCTTTACAGATAACCAACGGTTTT GCCAATCCGTTTCTCAGCAGTTTCAAGGGAGTTCCGGAGTATGCCGATACGTTTGGAGTGAATCATGCCAATGCATTGAT ATCTTTGTCGCAGGTGTCGGAAACATTGTGTATCTTATTAATACCGTTTGTGTTGAAGCATTTCGGAATCAAGCGTGTTA TGCTGATAGCCATGTTGGCATGGGTACTTCGTTTCGGATTGTTCGGACTGGGGAATCCTGGGCCGGGTGTCTGGATGTTT GTACTGTCCATGATTGTGTATGGGGTGGCTTTCGACTTCTTCAACATTTCTGGTTCGTTGTTTGTTAACAATGAAACTGA TTTATCCATCCGTTCCAGTGCTCAGGGATTGTTCGTGATTATGACAAATGGTATTGGCGCTACGGTGGGAACGTTGGGAG CTCAGGCAGTGGTAAATCGTTTTGTTGATATGAACAGCAGTGCTCCGCAGATGGAGGGATGGAGCATGACATGGTTTGTC TTTGCGGGATATGCCTTGGCGGTTGCGGTATTGTTTGCTGTCATATTCAAGTATAAGCATCGTCCCGGGCAAGTTTGA
Upstream 100 bases:
>100_bases CTGCCGGAAAGGCTTTGTTTTTTAAGATGAATCTCCATGAAAAATCGAATTGTTTTATATCTTTGCAAGTAATATAAAAA ACACACATTAAAGAAGAAAG
Downstream 100 bases:
>100_bases TAAATTATTTTTTGACCGTTTCCGATGTAGACGGGAATGGTGGAAGGAAAGTTAAATTATGGATGAAATAGAATTGAAGG TACATGATATGTCCTCTACA
Product: xanthosine permease
Products: NA
Alternate protein names: Nucleoside-transport system protein nupG [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKNEITGMRLRLIVMNFLQFAVWGAYLTSMGTYLFNIGLGAKIGLFYAMQGIVSLFMPAIMGIIADRWVPAQKLYGFCHF MAAVFMVAAGWYGYVDGEAVNFGTLFTFYSLSVAFYMPTLALTNSVAYTALDKVKLDPVIAFPPIRIFGTIGFICSMLLT DILGFQNNYMQFFSCACFGVILAVYALTLPECPVSRGGEQKSLVDAMGLRAFTLFKQKKMAIFFIFSMLLGVSLQITNGF ANPFLSSFKGVPEYADTFGVNHANALISLSQVSETLCILLIPFVLKHFGIKRVMLIAMLAWVLRFGLFGLGNPGPGVWMF VLSMIVYGVAFDFFNISGSLFVNNETDLSIRSSAQGLFVIMTNGIGATVGTLGAQAVVNRFVDMNSSAPQMEGWSMTWFV FAGYALAVAVLFAVIFKYKHRPGQV
Sequences:
>Translated_425_residues MKNEITGMRLRLIVMNFLQFAVWGAYLTSMGTYLFNIGLGAKIGLFYAMQGIVSLFMPAIMGIIADRWVPAQKLYGFCHF MAAVFMVAAGWYGYVDGEAVNFGTLFTFYSLSVAFYMPTLALTNSVAYTALDKVKLDPVIAFPPIRIFGTIGFICSMLLT DILGFQNNYMQFFSCACFGVILAVYALTLPECPVSRGGEQKSLVDAMGLRAFTLFKQKKMAIFFIFSMLLGVSLQITNGF ANPFLSSFKGVPEYADTFGVNHANALISLSQVSETLCILLIPFVLKHFGIKRVMLIAMLAWVLRFGLFGLGNPGPGVWMF VLSMIVYGVAFDFFNISGSLFVNNETDLSIRSSAQGLFVIMTNGIGATVGTLGAQAVVNRFVDMNSSAPQMEGWSMTWFV FAGYALAVAVLFAVIFKYKHRPGQV >Mature_425_residues MKNEITGMRLRLIVMNFLQFAVWGAYLTSMGTYLFNIGLGAKIGLFYAMQGIVSLFMPAIMGIIADRWVPAQKLYGFCHF MAAVFMVAAGWYGYVDGEAVNFGTLFTFYSLSVAFYMPTLALTNSVAYTALDKVKLDPVIAFPPIRIFGTIGFICSMLLT DILGFQNNYMQFFSCACFGVILAVYALTLPECPVSRGGEQKSLVDAMGLRAFTLFKQKKMAIFFIFSMLLGVSLQITNGF ANPFLSSFKGVPEYADTFGVNHANALISLSQVSETLCILLIPFVLKHFGIKRVMLIAMLAWVLRFGLFGLGNPGPGVWMF VLSMIVYGVAFDFFNISGSLFVNNETDLSIRSSAQGLFVIMTNGIGATVGTLGAQAVVNRFVDMNSSAPQMEGWSMTWFV FAGYALAVAVLFAVIFKYKHRPGQV
Specific function: Transports nucleosides with a high affinity. Driven by a proton motive force [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli xapB and yegT [H]
Homologues:
Organism=Escherichia coli, GI87082192, Length=417, Percent_Identity=45.5635491606715, Blast_Score=352, Evalue=2e-98, Organism=Escherichia coli, GI1788745, Length=419, Percent_Identity=47.255369928401, Blast_Score=346, Evalue=1e-96, Organism=Escherichia coli, GI1788415, Length=421, Percent_Identity=30.166270783848, Blast_Score=163, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR004740 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46734; Mature: 46734
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNEITGMRLRLIVMNFLQFAVWGAYLTSMGTYLFNIGLGAKIGLFYAMQGIVSLFMPAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH MGIIADRWVPAQKLYGFCHFMAAVFMVAAGWYGYVDGEAVNFGTLFTFYSLSVAFYMPTL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHH ALTNSVAYTALDKVKLDPVIAFPPIRIFGTIGFICSMLLTDILGFQNNYMQFFSCACFGV HHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ILAVYALTLPECPVSRGGEQKSLVDAMGLRAFTLFKQKKMAIFFIFSMLLGVSLQITNGF HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC ANPFLSSFKGVPEYADTFGVNHANALISLSQVSETLCILLIPFVLKHFGIKRVMLIAMLA CHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH WVLRFGLFGLGNPGPGVWMFVLSMIVYGVAFDFFNISGSLFVNNETDLSIRSSAQGLFVI HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCEEEEE MTNGIGATVGTLGAQAVVNRFVDMNSSAPQMEGWSMTWFVFAGYALAVAVLFAVIFKYKH EECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC RPGQV CCCCC >Mature Secondary Structure MKNEITGMRLRLIVMNFLQFAVWGAYLTSMGTYLFNIGLGAKIGLFYAMQGIVSLFMPAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH MGIIADRWVPAQKLYGFCHFMAAVFMVAAGWYGYVDGEAVNFGTLFTFYSLSVAFYMPTL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHH ALTNSVAYTALDKVKLDPVIAFPPIRIFGTIGFICSMLLTDILGFQNNYMQFFSCACFGV HHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ILAVYALTLPECPVSRGGEQKSLVDAMGLRAFTLFKQKKMAIFFIFSMLLGVSLQITNGF HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC ANPFLSSFKGVPEYADTFGVNHANALISLSQVSETLCILLIPFVLKHFGIKRVMLIAMLA CHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH WVLRFGLFGLGNPGPGVWMFVLSMIVYGVAFDFFNISGSLFVNNETDLSIRSSAQGLFVI HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCEEEEE MTNGIGATVGTLGAQAVVNRFVDMNSSAPQMEGWSMTWFVFAGYALAVAVLFAVIFKYKH EECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC RPGQV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3311747; 9278503 [H]