| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yhhJ [C]
Identifier: 150006066
GI number: 150006066
Start: 4434877
End: 4436049
Strand: Reverse
Name: yhhJ [C]
Synonym: BVU_3575
Alternate gene names: 150006066
Gene position: 4436049-4434877 (Counterclockwise)
Preceding gene: 150006067
Following gene: 150006065
Centisome position: 85.92
GC content: 43.22
Gene sequence:
>1173_bases ATGAAAGAATCTCCTTTTATAGCGGTATTGAAACGTGAACTGGACCGTATGGTTTCCCGGCGCATTTATTTTGCATCGTG TATCGTCTTGCCTTTGTTTTCTATCTTCTTTATGGCTACAATTTTTGGTAACGGACAGATGGAGAATCTGCCTGTGGGTG TTGTGGATGGTGATAATACAGCCACTTCTCGTGAGATAATTCGTATGACCGAGGCTGTTCCCACTTTCCGCATCACTCGG CATTATGCCGATGAAGCGGAGGCCAGGGCAGATGTGCAGCGGAAAAGTATTTATGGATACCTCAGTATTCCGTCTGGTTT TGAAGCAAAGGTGATGGATGGTAAGGAAACAGCTCTGACTTATTATTACCATTATGCATTGATGAGTGTGGGAAGTGAGA TTCACGGAGCATTTCAAAGTTTGTTGAAAAGCATCTCGGTAGTTCCCATTGTCACTCATGCTGTGGCATTGGGTATAAAT CAGGAAGAGATAGAATCTTTTCTGTTACCGGTCACCACACAGAATCATCCGTTATTTAATCCTGATATGGATTATTCGGT CTATCTTACACAGCCATTCTTCTTTGTTTTTCTGCAAGTTATCTTGTTGTTGGTCACTACATACTCCATTGGCAGTGAAG GGAAATTCCATACTTCAGCCAATTGGCTGGCAGTGGCAGATGGGAATATCTGGGTGGCGGTCACTGCCAAGTTACTTCCA TACAGTTTTATCTTCATCGTTATGAGTATTCTGGCAAACTATGTCTTTTTTGGTGCCATGCATATACCGATGGATTGTGG TTTTTGGGCGTTGAATCTTACTTCGGCACTATTGGTCATTGCTACGCAGGCGCTGGCGGTTTTTCTGTTCTCTCTTTTTC CTGCGTTGAGTATTATTATCAGTATCGTTTCCATGGTAGGATCGTTAGGTGCTACCCTTGGCGGGGTTACCTTTCCGGTG CTTCACATGTTTGCACCGGTGTACTATGCCTCTTATCTTTTCCCCGTCCGTCACTTTGTCGAGATTGGACAGAATCTGCT TTATGGCAACTATGGTTATGCGTATATGTGGGGCAATGTAGCCTGTCTGCTGTTGTTCCTTATTCCTCCTTTATTGTTGT TACCTCATTTGAAACGCTCTTTAATCAGTCGGAAATATGACGATATTGAATAA
Upstream 100 bases:
>100_bases GGGTATGTCCGTCTTGGTAAATCTGGATGAATTGAAATGATAGAAGGATAGCTATGTTATTCTGATTGCAGTGAATGGTA AATATAAATGAACTACTTGA
Downstream 100 bases:
>100_bases TATATTAGCTGTATCTTGGCACGAGTTTCGTGTGATGTGTACCCGCTATTCCATTTTATTGGTACTCAGCGGTGGCATCT TTGTGTATGGATTACTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKESPFIAVLKRELDRMVSRRIYFASCIVLPLFSIFFMATIFGNGQMENLPVGVVDGDNTATSREIIRMTEAVPTFRITR HYADEAEARADVQRKSIYGYLSIPSGFEAKVMDGKETALTYYYHYALMSVGSEIHGAFQSLLKSISVVPIVTHAVALGIN QEEIESFLLPVTTQNHPLFNPDMDYSVYLTQPFFFVFLQVILLLVTTYSIGSEGKFHTSANWLAVADGNIWVAVTAKLLP YSFIFIVMSILANYVFFGAMHIPMDCGFWALNLTSALLVIATQALAVFLFSLFPALSIIISIVSMVGSLGATLGGVTFPV LHMFAPVYYASYLFPVRHFVEIGQNLLYGNYGYAYMWGNVACLLLFLIPPLLLLPHLKRSLISRKYDDIE
Sequences:
>Translated_390_residues MKESPFIAVLKRELDRMVSRRIYFASCIVLPLFSIFFMATIFGNGQMENLPVGVVDGDNTATSREIIRMTEAVPTFRITR HYADEAEARADVQRKSIYGYLSIPSGFEAKVMDGKETALTYYYHYALMSVGSEIHGAFQSLLKSISVVPIVTHAVALGIN QEEIESFLLPVTTQNHPLFNPDMDYSVYLTQPFFFVFLQVILLLVTTYSIGSEGKFHTSANWLAVADGNIWVAVTAKLLP YSFIFIVMSILANYVFFGAMHIPMDCGFWALNLTSALLVIATQALAVFLFSLFPALSIIISIVSMVGSLGATLGGVTFPV LHMFAPVYYASYLFPVRHFVEIGQNLLYGNYGYAYMWGNVACLLLFLIPPLLLLPHLKRSLISRKYDDIE >Mature_390_residues MKESPFIAVLKRELDRMVSRRIYFASCIVLPLFSIFFMATIFGNGQMENLPVGVVDGDNTATSREIIRMTEAVPTFRITR HYADEAEARADVQRKSIYGYLSIPSGFEAKVMDGKETALTYYYHYALMSVGSEIHGAFQSLLKSISVVPIVTHAVALGIN QEEIESFLLPVTTQNHPLFNPDMDYSVYLTQPFFFVFLQVILLLVTTYSIGSEGKFHTSANWLAVADGNIWVAVTAKLLP YSFIFIVMSILANYVFFGAMHIPMDCGFWALNLTSALLVIATQALAVFLFSLFPALSIIISIVSMVGSLGATLGGVTFPV LHMFAPVYYASYLFPVRHFVEIGQNLLYGNYGYAYMWGNVACLLLFLIPPLLLLPHLKRSLISRKYDDIE
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43619; Mature: 43619
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKESPFIAVLKRELDRMVSRRIYFASCIVLPLFSIFFMATIFGNGQMENLPVGVVDGDNT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC ATSREIIRMTEAVPTFRITRHYADEAEARADVQRKSIYGYLSIPSGFEAKVMDGKETALT HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCCHHHHH YYYHYALMSVGSEIHGAFQSLLKSISVVPIVTHAVALGINQEEIESFLLPVTTQNHPLFN HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCEECCCCCCCC PDMDYSVYLTQPFFFVFLQVILLLVTTYSIGSEGKFHTSANWLAVADGNIWVAVTAKLLP CCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCEEEEEHHHHHH YSFIFIVMSILANYVFFGAMHIPMDCGFWALNLTSALLVIATQALAVFLFSLFPALSIII HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIVSMVGSLGATLGGVTFPVLHMFAPVYYASYLFPVRHFVEIGQNLLYGNYGYAYMWGNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEHHHH ACLLLFLIPPLLLLPHLKRSLISRKYDDIE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKESPFIAVLKRELDRMVSRRIYFASCIVLPLFSIFFMATIFGNGQMENLPVGVVDGDNT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC ATSREIIRMTEAVPTFRITRHYADEAEARADVQRKSIYGYLSIPSGFEAKVMDGKETALT HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEECCCHHHHH YYYHYALMSVGSEIHGAFQSLLKSISVVPIVTHAVALGINQEEIESFLLPVTTQNHPLFN HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCEECCCCCCCC PDMDYSVYLTQPFFFVFLQVILLLVTTYSIGSEGKFHTSANWLAVADGNIWVAVTAKLLP CCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCEEEEEHHHHHH YSFIFIVMSILANYVFFGAMHIPMDCGFWALNLTSALLVIATQALAVFLFSLFPALSIII HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIVSMVGSLGATLGGVTFPVLHMFAPVYYASYLFPVRHFVEIGQNLLYGNYGYAYMWGNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEHHHH ACLLLFLIPPLLLLPHLKRSLISRKYDDIE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA