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The map label for this gene is atpD1 [H]

Identifier: 150006059

GI number: 150006059

Start: 4421505

End: 4422110

Strand: Reverse

Name: atpD1 [H]

Synonym: BVU_3563

Alternate gene names: 150006059

Gene position: 4422110-4421505 (Counterclockwise)

Preceding gene: 150006060

Following gene: 150006058

Centisome position: 85.65

GC content: 42.08

Gene sequence:

>606_bases
ATGGCAATAAAGTTTCAATATAACAAGACCTCGCTACAACAGCTTGAGAAGCAGCTCAAGGTCCGTGTGCGTACGCTTCC
TATTATTAAAAATAAGGAAAGCGCTCTCCGCATGGAAGTAAAGAGATGCAAGACAGAAGCTGCCGGGTTGGAGGAAAGGC
TTGAAAAACAGATTCAGGCATACGAGGCCATGTTCGCACTTTGGAATGAATTTGATGCTTCATTAATAAAAGTGAGTGAT
GTTCATTTGGGTATAAAGAAGATTGCCGGTGTACGAGTTCCCTTGTTGGAAAACGTAGACTTTGACATCCGTCCCTACAG
TCTGTTCAACAGCCCGAAGTGGTATTCCGATGGAATATATTTGTTGAAAGGATTGGCACAGACTGCTATTGAAAGGGAAT
TTATGCTTGCCAAACTGAACCTGCTGGAACATGCGCGTAAAAAGACCACTCAAAAAGTGAATCTTTTTGAGAAAGTGCAG
ATACCCGGATATCAGGATGCTCTGCGAAAGATAAAACGATTTATGGAGGATGAAGAGAATTTGTCCAAATCATCGCAGAA
GATTCTGAAATCTATTCAAGAGAAAAGAAAGGAGGCGGAGGCATGA

Upstream 100 bases:

>100_bases
CATGGGGATTGTTCAGCAAATACTTTAAGCCGGAAGAAGTCAATATAAAGAAAGAATTGGTTGACCAGCATTGGAAAAAA
CAATAAATTAACGAAGAAAC

Downstream 100 bases:

>100_bases
TTACAAAAATGAAGAAGTTGACTTTCCTTATTTATCATAAGGACTATGAATGTTTCCTGCAAAATATCCGTGATTTGGGC
GTAGTCCACGTGGCGGAAAA

Product: V-type ATP synthase subunit D

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit D 1 [H]

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAIKFQYNKTSLQQLEKQLKVRVRTLPIIKNKESALRMEVKRCKTEAAGLEERLEKQIQAYEAMFALWNEFDASLIKVSD
VHLGIKKIAGVRVPLLENVDFDIRPYSLFNSPKWYSDGIYLLKGLAQTAIEREFMLAKLNLLEHARKKTTQKVNLFEKVQ
IPGYQDALRKIKRFMEDEENLSKSSQKILKSIQEKRKEAEA

Sequences:

>Translated_201_residues
MAIKFQYNKTSLQQLEKQLKVRVRTLPIIKNKESALRMEVKRCKTEAAGLEERLEKQIQAYEAMFALWNEFDASLIKVSD
VHLGIKKIAGVRVPLLENVDFDIRPYSLFNSPKWYSDGIYLLKGLAQTAIEREFMLAKLNLLEHARKKTTQKVNLFEKVQ
IPGYQDALRKIKRFMEDEENLSKSSQKILKSIQEKRKEAEA
>Mature_200_residues
AIKFQYNKTSLQQLEKQLKVRVRTLPIIKNKESALRMEVKRCKTEAAGLEERLEKQIQAYEAMFALWNEFDASLIKVSDV
HLGIKKIAGVRVPLLENVDFDIRPYSLFNSPKWYSDGIYLLKGLAQTAIEREFMLAKLNLLEHARKKTTQKVNLFEKVQI
PGYQDALRKIKRFMEDEENLSKSSQKILKSIQEKRKEAEA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG1394

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase D subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002699 [H]

Pfam domain/function: PF01813 ATP-synt_D [H]

EC number: 3.6.3.14

Molecular weight: Translated: 23447; Mature: 23316

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKFQYNKTSLQQLEKQLKVRVRTLPIIKNKESALRMEVKRCKTEAAGLEERLEKQIQA
CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YEAMFALWNEFDASLIKVSDVHLGIKKIAGVRVPLLENVDFDIRPYSLFNSPKWYSDGIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHCCCCCCCCCHHH
LLKGLAQTAIEREFMLAKLNLLEHARKKTTQKVNLFEKVQIPGYQDALRKIKRFMEDEEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LSKSSQKILKSIQEKRKEAEA
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIKFQYNKTSLQQLEKQLKVRVRTLPIIKNKESALRMEVKRCKTEAAGLEERLEKQIQA
EEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YEAMFALWNEFDASLIKVSDVHLGIKKIAGVRVPLLENVDFDIRPYSLFNSPKWYSDGIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHCCCCCCCCCHHH
LLKGLAQTAIEREFMLAKLNLLEHARKKTTQKVNLFEKVQIPGYQDALRKIKRFMEDEEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LSKSSQKILKSIQEKRKEAEA
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]