| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yhcX [H]
Identifier: 150006031
GI number: 150006031
Start: 4386033
End: 4387565
Strand: Reverse
Name: yhcX [H]
Synonym: BVU_3529
Alternate gene names: 150006031
Gene position: 4387565-4386033 (Counterclockwise)
Preceding gene: 150006033
Following gene: 150006028
Centisome position: 84.98
GC content: 42.27
Gene sequence:
>1533_bases ATGGAACCGATGCATAAAATTAATAAAGTAGAGGTCCGGAATTTACAGATCGAAGATTACATCCAATTATCACAATCATT CAAGCGGGTGTATGCGGATAAGGATGTGTTTTGGACACACGAGCAAATAGAAACGCTTATCCGGATTTTTCCGGAAGGGC AAGTAGTAACGGTGGTAGACGATAAGATAGTGGGATGTGCTCTTTCTATTATTGTAGACTATGATATGGTAAAGGGAGAT CATACCTATGCCAAAGTAACTGGTAATGAAACTTTCTGTACGCATAATCCGGAAGGGAATATTTTGTATGGTATCGAGGT GTTTATCCATCCGGATTATCGCGGTTTGCGTCTGGCACGCCGTATGTATGAGTACCGGAAAGAATTATGCGAGAAACTGA ATCTGAAAGCGATCATGTTCGGTGGTCGTATTCCTAATTATTATAAGTATGCGGATACGATGCGTCCTAAGGAATATTTG GATAAGGTGCGTTCCCGTGAGATTTATGATCCGGTATTGACATTTCAGCTTTCCAATGATTTTCATGTGCGTCGTGTCAT GAAGAATTATCTTCCCAATGACGAAGAATCCAAGCATTGTGCCACTTTGTTGCAATGGGATAATATTTATTATCAGGAGC CTACGCAGGATTATGTGGATAAGAAAACCACTGTACGTGTAGGGTTAGTGCAATGGCAGATGCGCCCTTATAAAACATTG GATGATGTATTTGAGCAGGTTGAGTTTTTCGTAGATGCCGTTTCCGATTATAAGAGTGATTTTGTTCTTTTTCCGGAATA TTTCAATGCGCCGTTGATGGCCAAGTTCAATCATTTGGGAGAAGCCCAGAGCATTCGTGGTTTGGCACAATATACCGAAG AGGTTCGCGACCGTTTTATCAATTTGGCTATCAGTTATAATATTAATATCATTACGGGTAGTATGCCATACGTAAAAGAG GACGGAGGGCTTTATAATGTTGGTTTTTTAGTACGGCGTGACGGCTCATACGAAATGTATGAAAAGGTACATGTCACTCC CGATGAGATAAAGAGTTGGGGCCTCTCGGGCGGTAAGATGGTGCAGACTTTTGATACGGATTGTGCTAAAATTGGTATCT TGATTTGTTATGATGTGGAATTTCCCGAGCTCTCTCGTATCATGGCCGATCAGGGAATGCAGATTCTGTTTGTTCCATTC CTCACCGATACTCAGAACGGTTATTCCCGTGTACGTGTTTGTGCTCAGGCACGGGCAATCGAGAATGAATGTTTTGTCGT TATAGCCGGTAGTGTGGGAAATTTGCCGCGTGTGCACAATATGGATATTCAGTATGCACAGTCTGGAGTGTTTACTCCGT GTGATTTCGCTTTCCCAACTGATGGCAAACGGGCCGAGGCGACTCCGAATACCGAAATGATTTTAGTTTCGGATGTTGAT CTGAATCTGTTGAATGAATTGCATACGTATGGCAGTGTGCGCAATTTGCGTGACCGCAGGCATGACCTTTATGAACTGAA GATAAAGAAATAA
Upstream 100 bases:
>100_bases GAGTGATATTCTCTTTATCTTTTTCTGTTTGGGAGAACATCGTTTTATAATTTGTCCTACCTTTGCACCGCTGTTTTAAA ATATAAATAAGAGAATCATT
Downstream 100 bases:
>100_bases AAAAATGTTTCATTACGGATTACTCAGGTTAACGCTGGTTTATAGATAAGTGGTTATTATTTTATATTTCCGCCTTACTT TTAAGAATAACCTGTGTTAA
Product: putative carbon-nitrogen hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MEPMHKINKVEVRNLQIEDYIQLSQSFKRVYADKDVFWTHEQIETLIRIFPEGQVVTVVDDKIVGCALSIIVDYDMVKGD HTYAKVTGNETFCTHNPEGNILYGIEVFIHPDYRGLRLARRMYEYRKELCEKLNLKAIMFGGRIPNYYKYADTMRPKEYL DKVRSREIYDPVLTFQLSNDFHVRRVMKNYLPNDEESKHCATLLQWDNIYYQEPTQDYVDKKTTVRVGLVQWQMRPYKTL DDVFEQVEFFVDAVSDYKSDFVLFPEYFNAPLMAKFNHLGEAQSIRGLAQYTEEVRDRFINLAISYNINIITGSMPYVKE DGGLYNVGFLVRRDGSYEMYEKVHVTPDEIKSWGLSGGKMVQTFDTDCAKIGILICYDVEFPELSRIMADQGMQILFVPF LTDTQNGYSRVRVCAQARAIENECFVVIAGSVGNLPRVHNMDIQYAQSGVFTPCDFAFPTDGKRAEATPNTEMILVSDVD LNLLNELHTYGSVRNLRDRRHDLYELKIKK
Sequences:
>Translated_510_residues MEPMHKINKVEVRNLQIEDYIQLSQSFKRVYADKDVFWTHEQIETLIRIFPEGQVVTVVDDKIVGCALSIIVDYDMVKGD HTYAKVTGNETFCTHNPEGNILYGIEVFIHPDYRGLRLARRMYEYRKELCEKLNLKAIMFGGRIPNYYKYADTMRPKEYL DKVRSREIYDPVLTFQLSNDFHVRRVMKNYLPNDEESKHCATLLQWDNIYYQEPTQDYVDKKTTVRVGLVQWQMRPYKTL DDVFEQVEFFVDAVSDYKSDFVLFPEYFNAPLMAKFNHLGEAQSIRGLAQYTEEVRDRFINLAISYNINIITGSMPYVKE DGGLYNVGFLVRRDGSYEMYEKVHVTPDEIKSWGLSGGKMVQTFDTDCAKIGILICYDVEFPELSRIMADQGMQILFVPF LTDTQNGYSRVRVCAQARAIENECFVVIAGSVGNLPRVHNMDIQYAQSGVFTPCDFAFPTDGKRAEATPNTEMILVSDVD LNLLNELHTYGSVRNLRDRRHDLYELKIKK >Mature_510_residues MEPMHKINKVEVRNLQIEDYIQLSQSFKRVYADKDVFWTHEQIETLIRIFPEGQVVTVVDDKIVGCALSIIVDYDMVKGD HTYAKVTGNETFCTHNPEGNILYGIEVFIHPDYRGLRLARRMYEYRKELCEKLNLKAIMFGGRIPNYYKYADTMRPKEYL DKVRSREIYDPVLTFQLSNDFHVRRVMKNYLPNDEESKHCATLLQWDNIYYQEPTQDYVDKKTTVRVGLVQWQMRPYKTL DDVFEQVEFFVDAVSDYKSDFVLFPEYFNAPLMAKFNHLGEAQSIRGLAQYTEEVRDRFINLAISYNINIITGSMPYVKE DGGLYNVGFLVRRDGSYEMYEKVHVTPDEIKSWGLSGGKMVQTFDTDCAKIGILICYDVEFPELSRIMADQGMQILFVPF LTDTQNGYSRVRVCAQARAIENECFVVIAGSVGNLPRVHNMDIQYAQSGVFTPCDFAFPTDGKRAEATPNTEMILVSDVD LNLLNELHTYGSVRNLRDRRHDLYELKIKK
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=297, Percent_Identity=29.6296296296296, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI297632348, Length=276, Percent_Identity=27.8985507246377, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI5031947, Length=276, Percent_Identity=27.8985507246377, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI297632350, Length=276, Percent_Identity=27.8985507246377, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17556280, Length=291, Percent_Identity=27.1477663230241, Blast_Score=89, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6323383, Length=298, Percent_Identity=24.496644295302, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322335, Length=286, Percent_Identity=24.1258741258741, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI21355835, Length=298, Percent_Identity=24.8322147651007, Blast_Score=83, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR003010 - InterPro: IPR001110 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF00795 CN_hydrolase [H]
EC number: NA
Molecular weight: Translated: 59322; Mature: 59322
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPMHKINKVEVRNLQIEDYIQLSQSFKRVYADKDVFWTHEQIETLIRIFPEGQVVTVVD CCCHHHCCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCEEEEEC DKIVGCALSIIVDYDMVKGDHTYAKVTGNETFCTHNPEGNILYGIEVFIHPDYRGLRLAR CCHHHHHEEHEEEHHHCCCCCEEEEEECCCEEEEECCCCCEEEEEEEEECCCCHHHHHHH RMYEYRKELCEKLNLKAIMFGGRIPNYYKYADTMRPKEYLDKVRSREIYDPVLTFQLSND HHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCC FHVRRVMKNYLPNDEESKHCATLLQWDNIYYQEPTQDYVDKKTTVRVGLVQWQMRPYKTL HHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECCCCHHHHCCCCEEEEEEEEECCCCCHHH DDVFEQVEFFVDAVSDYKSDFVLFPEYFNAPLMAKFNHLGEAQSIRGLAQYTEEVRDRFI HHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHE NLAISYNINIITGSMPYVKEDGGLYNVGFLVRRDGSYEMYEKVHVTPDEIKSWGLSGGKM EEEEEEEEEEEECCCCCEECCCCEEEEEEEEEECCCHHHHHEECCCHHHHHHCCCCCCCE VQTFDTDCAKIGILICYDVEFPELSRIMADQGMQILFVPFLTDTQNGYSRVRVCAQARAI EEEECCCCCEEEEEEEEECCCHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHC ENECFVVIAGSVGNLPRVHNMDIQYAQSGVFTPCDFAFPTDGKRAEATPNTEMILVSDVD CCCEEEEEECCCCCCCCEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC LNLLNELHTYGSVRNLRDRRHDLYELKIKK HHHHHHHHHHHHHHHHHHHCCCEEEEEECC >Mature Secondary Structure MEPMHKINKVEVRNLQIEDYIQLSQSFKRVYADKDVFWTHEQIETLIRIFPEGQVVTVVD CCCHHHCCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCEEEEEC DKIVGCALSIIVDYDMVKGDHTYAKVTGNETFCTHNPEGNILYGIEVFIHPDYRGLRLAR CCHHHHHEEHEEEHHHCCCCCEEEEEECCCEEEEECCCCCEEEEEEEEECCCCHHHHHHH RMYEYRKELCEKLNLKAIMFGGRIPNYYKYADTMRPKEYLDKVRSREIYDPVLTFQLSND HHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCC FHVRRVMKNYLPNDEESKHCATLLQWDNIYYQEPTQDYVDKKTTVRVGLVQWQMRPYKTL HHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECCCCHHHHCCCCEEEEEEEEECCCCCHHH DDVFEQVEFFVDAVSDYKSDFVLFPEYFNAPLMAKFNHLGEAQSIRGLAQYTEEVRDRFI HHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHE NLAISYNINIITGSMPYVKEDGGLYNVGFLVRRDGSYEMYEKVHVTPDEIKSWGLSGGKM EEEEEEEEEEEECCCCCEECCCCEEEEEEEEEECCCHHHHHEECCCHHHHHHCCCCCCCE VQTFDTDCAKIGILICYDVEFPELSRIMADQGMQILFVPFLTDTQNGYSRVRVCAQARAI EEEECCCCCEEEEEEEEECCCHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHC ENECFVVIAGSVGNLPRVHNMDIQYAQSGVFTPCDFAFPTDGKRAEATPNTEMILVSDVD CCCEEEEEECCCCCCCCEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC LNLLNELHTYGSVRNLRDRRHDLYELKIKK HHHHHHHHHHHHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]