| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is ybjZ [C]
Identifier: 150006025
GI number: 150006025
Start: 4377208
End: 4379631
Strand: Reverse
Name: ybjZ [C]
Synonym: BVU_3523
Alternate gene names: 150006025
Gene position: 4379631-4377208 (Counterclockwise)
Preceding gene: 150006026
Following gene: 150006023
Centisome position: 84.82
GC content: 42.45
Gene sequence:
>2424_bases ATGATTATACAAAATTATTGGAATAGCGTTTGGCGTAATCTGATGAAGAGGAAAGGTTTCAGCTTCATCAATATCTTTGG CTTGGCTGTAGGCATGGCATCAGCTTTATTGATATTTACTTACGTTGCTTTTGAATTTAGTTTTGACAAAATGCATAGTA AGAGTGAACGGATTTATCGTGTGCAAAGTACTTTTCATGAGGGGGAAGTTCTGACGGATGATTGGGCGACCAGTTCATTC GGATATGGTTCGGCCATGCAGGAAAATCTGGCGGGAATTGAGGATTATACTCGTGTAGGATGTATTATCCAACCGGAGCA ATTGGTAAAATATGGCGAATTATGTCTGCGCGAGAATGGGATAGCATACGCTGATCCTGGCTTTTTCCGTTTGTTTGATT TTGAATTGTTGAAAGGTGACCGCGCTTCTTGTCTTTCCATGCCATGTCAGGTAGTGATTACGGAACGGATTGCCCGCAAA TATTTCAGAGATGAAGACCCTGTCGGGAAGATACTTATTTTTAACAGCAATATGGGGAAGGTGTCTTGTGAGGTAACTGG AGTCATGAAAGAAATGCCTTCTAATTCGCATATACATTATAATTTTCTTTTATCATATGCCACCTTACCTAAATGGGTAC AGGAGTATTGGTACAAACATGAAGCCTATACATATGTATTGCTGGATTCGCCCGAGCGCAAAGAAGAGATAGAACGTGCT TTTCCTCAATTGGCCGAGAAGTATAAAACTGAAGAGGCATTGAAAAACAAGACTTGGGGGGTGCGGTTGGAGCCATTGGA GAAGATTCATCTCAATCCTCAATTAGGTTATGAGGCCGAGTTGAAAGGAAACCATTCGGCCATCATCGCGTTGATTTTCG GAGCTATTGCTATTTTGATTATTGCTTGGATCAATTATATAAATCTGACAGTTGCCCGTTCTATGGAGCGTGCCAAAGAG GTAGGAGTGCGCAGGGTAGTGGGAGCTTTCCCGAAACAGCTTGTTGGTCAGTTTCTATTTGAAGCATTTGTAATGAATTT GATCGCTTTTATCATTGCGTTAGGATTGATCGAACTATTACTTCCTTCCTTCAATCAGTTGGTAGGACGTACTATTACTT TCTCTGTATGGTTTACGGAATATTGGGGGGGCGGGGTTCTATTGCTTTTTATAGTCGGTATTTATATTTCCGGTTACTAT CCTGCCCGCGCATTGTTGCGTAAGAAGCCGATTGTTTTACTGAAAGGTAAATTCCAAAATAGCCGTTCCGGAGAAAATAC ACGTAAAATATTGGTCATAGTACAATATACGGCATCCATGATATTGCTTTGTAGTACATTAATTGTGTTTGCACAACTCA GCTATATGCGTCGGCAGTCTTTGGGAGTAAAGACTGACCAGATTTTGGTAATCAAGTTTCCCGGGCCTACTGAGGGTATG AAAACAAAGATGGAGTCTATGCGGAGAGCTATCAAGAAATTGCCATTGGCGTCGAAAGTAACTTGTTCCGGGGCGGTACC GGGTGAAGAGGTGGCCATGTTCCTGTCCAATCATCGGGCACATGATGCGTTGAAGCAAAACCGGTTGTACGAGATGCTGA GTTGTGACCCTGACTATATAGATGCATACGGACTGGAGGTGGTAGCCGGACGGGGTTTTTCCGAGGAATATGGGGACGAT GTGAATAAATTGGTTATCAACGAAACGGCTGCCCGTATGTTAGGATATGTGGATAATGATGATGCCATTGGTGAGGAAAT AGCTGTTGAAACGCTAGGAGAGCCCATGCAGGTAATCGGGGTAGTGAAGGATTATCATCAGCAAGCGTTGAATAAAGGTT ATACAGGGGTAATGCTTTTCCATAAAGATAAGATTGACTGGATTCCTCAGCGTTATATTTCGGTTGTGATGAAACCGGGT GATCCTTCGGAATTAGTATCACAGATAGGAGAAATATGGAATAATTATTTTGCGGATTCCAGTTTTGATTATTTCTTCCT CGACCAGTTCTATGACCGGCAGTACCGTCAGGATGAGGCTTTCGGCGTATTGATGGGAGGTTTTACCGGATTGGCTATTT TTATCTCCTGCTTAGGTTTATGGGTGTTGGTTATGTTCTCTTGTGCCGTCCGTACCAAGGAGATGGGTATCCGGAAAGTA TTGGGGGCATCTCGTTGGAATCTGTTTTATCAGTTGGGTAAAGGTTTCTTTATTCCTATTATTATCGCTATTCTGATTGC GTTGCCTGTGGCATGGGGCAGCATGAATGCATGGTTGGCTCATTATCCGTTCCGAACAGAATTGAAAGTGTGGTTCTTTC TGCTTCCTGTGGTCTTGATGTTGTTGATTTCTTTTCTGACTGTAGCAGGACAAACCATAAAGGTTGTTTATAGTAAACCC GCTCGGTCATTGAAATATGAATAA
Upstream 100 bases:
>100_bases ATGCTGCTTATGCACATCGTATAATCCGTTTGCTGGATGGTAAAATTATTGCCGAGAATCGTAACCGCCCTATGGAATCT GACAGCAAAATTGAAATTTT
Downstream 100 bases:
>100_bases TGGAATATAAGATATCCGTGGTTAGTAATTCATTTACAAGGAATATCATTTAAAACCAATATAAATTATCGTACCAGTTC ATTATGGCAGATCAATACTG
Product: putative ABC transporter permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MIIQNYWNSVWRNLMKRKGFSFINIFGLAVGMASALLIFTYVAFEFSFDKMHSKSERIYRVQSTFHEGEVLTDDWATSSF GYGSAMQENLAGIEDYTRVGCIIQPEQLVKYGELCLRENGIAYADPGFFRLFDFELLKGDRASCLSMPCQVVITERIARK YFRDEDPVGKILIFNSNMGKVSCEVTGVMKEMPSNSHIHYNFLLSYATLPKWVQEYWYKHEAYTYVLLDSPERKEEIERA FPQLAEKYKTEEALKNKTWGVRLEPLEKIHLNPQLGYEAELKGNHSAIIALIFGAIAILIIAWINYINLTVARSMERAKE VGVRRVVGAFPKQLVGQFLFEAFVMNLIAFIIALGLIELLLPSFNQLVGRTITFSVWFTEYWGGGVLLLFIVGIYISGYY PARALLRKKPIVLLKGKFQNSRSGENTRKILVIVQYTASMILLCSTLIVFAQLSYMRRQSLGVKTDQILVIKFPGPTEGM KTKMESMRRAIKKLPLASKVTCSGAVPGEEVAMFLSNHRAHDALKQNRLYEMLSCDPDYIDAYGLEVVAGRGFSEEYGDD VNKLVINETAARMLGYVDNDDAIGEEIAVETLGEPMQVIGVVKDYHQQALNKGYTGVMLFHKDKIDWIPQRYISVVMKPG DPSELVSQIGEIWNNYFADSSFDYFFLDQFYDRQYRQDEAFGVLMGGFTGLAIFISCLGLWVLVMFSCAVRTKEMGIRKV LGASRWNLFYQLGKGFFIPIIIAILIALPVAWGSMNAWLAHYPFRTELKVWFFLLPVVLMLLISFLTVAGQTIKVVYSKP ARSLKYE
Sequences:
>Translated_807_residues MIIQNYWNSVWRNLMKRKGFSFINIFGLAVGMASALLIFTYVAFEFSFDKMHSKSERIYRVQSTFHEGEVLTDDWATSSF GYGSAMQENLAGIEDYTRVGCIIQPEQLVKYGELCLRENGIAYADPGFFRLFDFELLKGDRASCLSMPCQVVITERIARK YFRDEDPVGKILIFNSNMGKVSCEVTGVMKEMPSNSHIHYNFLLSYATLPKWVQEYWYKHEAYTYVLLDSPERKEEIERA FPQLAEKYKTEEALKNKTWGVRLEPLEKIHLNPQLGYEAELKGNHSAIIALIFGAIAILIIAWINYINLTVARSMERAKE VGVRRVVGAFPKQLVGQFLFEAFVMNLIAFIIALGLIELLLPSFNQLVGRTITFSVWFTEYWGGGVLLLFIVGIYISGYY PARALLRKKPIVLLKGKFQNSRSGENTRKILVIVQYTASMILLCSTLIVFAQLSYMRRQSLGVKTDQILVIKFPGPTEGM KTKMESMRRAIKKLPLASKVTCSGAVPGEEVAMFLSNHRAHDALKQNRLYEMLSCDPDYIDAYGLEVVAGRGFSEEYGDD VNKLVINETAARMLGYVDNDDAIGEEIAVETLGEPMQVIGVVKDYHQQALNKGYTGVMLFHKDKIDWIPQRYISVVMKPG DPSELVSQIGEIWNNYFADSSFDYFFLDQFYDRQYRQDEAFGVLMGGFTGLAIFISCLGLWVLVMFSCAVRTKEMGIRKV LGASRWNLFYQLGKGFFIPIIIAILIALPVAWGSMNAWLAHYPFRTELKVWFFLLPVVLMLLISFLTVAGQTIKVVYSKP ARSLKYE >Mature_807_residues MIIQNYWNSVWRNLMKRKGFSFINIFGLAVGMASALLIFTYVAFEFSFDKMHSKSERIYRVQSTFHEGEVLTDDWATSSF GYGSAMQENLAGIEDYTRVGCIIQPEQLVKYGELCLRENGIAYADPGFFRLFDFELLKGDRASCLSMPCQVVITERIARK YFRDEDPVGKILIFNSNMGKVSCEVTGVMKEMPSNSHIHYNFLLSYATLPKWVQEYWYKHEAYTYVLLDSPERKEEIERA FPQLAEKYKTEEALKNKTWGVRLEPLEKIHLNPQLGYEAELKGNHSAIIALIFGAIAILIIAWINYINLTVARSMERAKE VGVRRVVGAFPKQLVGQFLFEAFVMNLIAFIIALGLIELLLPSFNQLVGRTITFSVWFTEYWGGGVLLLFIVGIYISGYY PARALLRKKPIVLLKGKFQNSRSGENTRKILVIVQYTASMILLCSTLIVFAQLSYMRRQSLGVKTDQILVIKFPGPTEGM KTKMESMRRAIKKLPLASKVTCSGAVPGEEVAMFLSNHRAHDALKQNRLYEMLSCDPDYIDAYGLEVVAGRGFSEEYGDD VNKLVINETAARMLGYVDNDDAIGEEIAVETLGEPMQVIGVVKDYHQQALNKGYTGVMLFHKDKIDWIPQRYISVVMKPG DPSELVSQIGEIWNNYFADSSFDYFFLDQFYDRQYRQDEAFGVLMGGFTGLAIFISCLGLWVLVMFSCAVRTKEMGIRKV LGASRWNLFYQLGKGFFIPIIIAILIALPVAWGSMNAWLAHYPFRTELKVWFFLLPVVLMLLISFLTVAGQTIKVVYSKP ARSLKYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91914; Mature: 91914
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIQNYWNSVWRNLMKRKGFSFINIFGLAVGMASALLIFTYVAFEFSFDKMHSKSERIYR CEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VQSTFHEGEVLTDDWATSSFGYGSAMQENLAGIEDYTRVGCIIQPEQLVKYGELCLRENG HHHHHCCCCEECCCCCCCCCCCCHHHHHHHCCHHHHHHCCCEECHHHHHHHHHHHHHCCC IAYADPGFFRLFDFELLKGDRASCLSMPCQVVITERIARKYFRDEDPVGKILIFNSNMGK CEECCCCCEEEEEHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCE VSCEVTGVMKEMPSNSHIHYNFLLSYATLPKWVQEYWYKHEAYTYVLLDSPERKEEIERA EEEHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH FPQLAEKYKTEEALKNKTWGVRLEPLEKIHLNPQLGYEAELKGNHSAIIALIFGAIAILI HHHHHHHHHHHHHHHCCCCCEEECCHHHEECCCCCCCEEEECCCCHHHHHHHHHHHHHHH IAWINYINLTVARSMERAKEVGVRRVVGAFPKQLVGQFLFEAFVMNLIAFIIALGLIELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPSFNQLVGRTITFSVWFTEYWGGGVLLLFIVGIYISGYYPARALLRKKPIVLLKGKFQN HHHHHHHHCCEEEEEEEEEHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCC SRSGENTRKILVIVQYTASMILLCSTLIVFAQLSYMRRQSLGVKTDQILVIKFPGPTEGM CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHH KTKMESMRRAIKKLPLASKVTCSGAVPGEEVAMFLSNHRAHDALKQNRLYEMLSCDPDYI HHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHH DAYGLEVVAGRGFSEEYGDDVNKLVINETAARMLGYVDNDDAIGEEIAVETLGEPMQVIG HHCCCEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHH VVKDYHQQALNKGYTGVMLFHKDKIDWIPQRYISVVMKPGDPSELVSQIGEIWNNYFADS HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCC SFDYFFLDQFYDRQYRQDEAFGVLMGGFTGLAIFISCLGLWVLVMFSCAVRTKEMGIRKV CCCHHHHHHHHHHHHCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGASRWNLFYQLGKGFFIPIIIAILIALPVAWGSMNAWLAHYPFRTELKVWFFLLPVVLM HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH LLISFLTVAGQTIKVVYSKPARSLKYE HHHHHHHHCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MIIQNYWNSVWRNLMKRKGFSFINIFGLAVGMASALLIFTYVAFEFSFDKMHSKSERIYR CEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VQSTFHEGEVLTDDWATSSFGYGSAMQENLAGIEDYTRVGCIIQPEQLVKYGELCLRENG HHHHHCCCCEECCCCCCCCCCCCHHHHHHHCCHHHHHHCCCEECHHHHHHHHHHHHHCCC IAYADPGFFRLFDFELLKGDRASCLSMPCQVVITERIARKYFRDEDPVGKILIFNSNMGK CEECCCCCEEEEEHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCE VSCEVTGVMKEMPSNSHIHYNFLLSYATLPKWVQEYWYKHEAYTYVLLDSPERKEEIERA EEEHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH FPQLAEKYKTEEALKNKTWGVRLEPLEKIHLNPQLGYEAELKGNHSAIIALIFGAIAILI HHHHHHHHHHHHHHHCCCCCEEECCHHHEECCCCCCCEEEECCCCHHHHHHHHHHHHHHH IAWINYINLTVARSMERAKEVGVRRVVGAFPKQLVGQFLFEAFVMNLIAFIIALGLIELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPSFNQLVGRTITFSVWFTEYWGGGVLLLFIVGIYISGYYPARALLRKKPIVLLKGKFQN HHHHHHHHCCEEEEEEEEEHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCC SRSGENTRKILVIVQYTASMILLCSTLIVFAQLSYMRRQSLGVKTDQILVIKFPGPTEGM CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHH KTKMESMRRAIKKLPLASKVTCSGAVPGEEVAMFLSNHRAHDALKQNRLYEMLSCDPDYI HHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHH DAYGLEVVAGRGFSEEYGDDVNKLVINETAARMLGYVDNDDAIGEEIAVETLGEPMQVIG HHCCCEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHH VVKDYHQQALNKGYTGVMLFHKDKIDWIPQRYISVVMKPGDPSELVSQIGEIWNNYFADS HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCC SFDYFFLDQFYDRQYRQDEAFGVLMGGFTGLAIFISCLGLWVLVMFSCAVRTKEMGIRKV CCCHHHHHHHHHHHHCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGASRWNLFYQLGKGFFIPIIIAILIALPVAWGSMNAWLAHYPFRTELKVWFFLLPVVLM HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH LLISFLTVAGQTIKVVYSKPARSLKYE HHHHHHHHCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA