| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is gpmA [H]
Identifier: 150006017
GI number: 150006017
Start: 4371773
End: 4372522
Strand: Reverse
Name: gpmA [H]
Synonym: BVU_3515
Alternate gene names: 150006017
Gene position: 4372522-4371773 (Counterclockwise)
Preceding gene: 150006018
Following gene: 150006016
Centisome position: 84.69
GC content: 48.27
Gene sequence:
>750_bases ATGAAAAGAATAGTGTTATTACGTCATGGCGAAAGCCTATGGAACAAAGAAAACCGTTTTACTGGATGGACGGACGTGGA TTTAAGCGAGAAAGGAGTTGAAGAAGCCTGCAAGGCAGGCGATGCATTACGGGAGGCTGGATTTTCTTTTGAGGCAGCTT ACACTTCTTACTTGAAACGTGCCGTAAAAACGTTGAACTGTGTCTTGGACCGGCTGGATGAAGACTGGATTCCGGTTGAA AAGACCTGGCGGCTGAACGAGAAGCATTACGGCATGCTTCAGGGACTGAATAAGAGTGAAACAGCGGTCCAATATGGTGA AGAACAAGTACACATCTGGCGAAGAAGCTATGACGTGGCTCCCGCTCCGGTAGGCAAAGATGATCCCCGTAATCCGGGCA TGGATATCCGCTATGCCGGTGTACCAGATAGGGAACTTCCCCGTACGGAATCCCTGAAAGATACTATTGGGCGTGTCATG CCTTACTGGAAATGCATCATCTTTCCCGCATTGATGTATAAGGACAGCCTGCTGGTAGTCGCCCATGGTAACAGCCTGCG CGGAATCATCAAGCATCTCAAAGGAATTTCCGATACGGATATTTCCAACCTGAACCTGCCTACGGCAGTTCCTTATGTCT TTGAATTTGACGACAGGCTGGTTCTTGTCAAGGACTACTACCTTGGAAACCCGGAAGAGATACGGAAACGGGCAGAAGCT GTGGCCAAACAAGGGATGGCTAAAAAATAA
Upstream 100 bases:
>100_bases GCTTTCCAGAAACCGATGAAAGACGGAGTTCAACTTCTGAACACCATTCAGGACGTATATCTGGATTCTTCAATAACCAT TGCATAAAGAAGAAGTATCC
Downstream 100 bases:
>100_bases AAATCTGTCTATCAAGCAGATGCTTTTTTTTAAGTTTTAATTATTAACTTTTAAAGAGGAGGTAAAAATGGTACCTGTAA AAACAAACCAGAATTGGTTA
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM 1; PGAM 1; Phosphoglyceromutase 1; dPGM 1 [H]
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKRIVLLRHGESLWNKENRFTGWTDVDLSEKGVEEACKAGDALREAGFSFEAAYTSYLKRAVKTLNCVLDRLDEDWIPVE KTWRLNEKHYGMLQGLNKSETAVQYGEEQVHIWRRSYDVAPAPVGKDDPRNPGMDIRYAGVPDRELPRTESLKDTIGRVM PYWKCIIFPALMYKDSLLVVAHGNSLRGIIKHLKGISDTDISNLNLPTAVPYVFEFDDRLVLVKDYYLGNPEEIRKRAEA VAKQGMAKK
Sequences:
>Translated_249_residues MKRIVLLRHGESLWNKENRFTGWTDVDLSEKGVEEACKAGDALREAGFSFEAAYTSYLKRAVKTLNCVLDRLDEDWIPVE KTWRLNEKHYGMLQGLNKSETAVQYGEEQVHIWRRSYDVAPAPVGKDDPRNPGMDIRYAGVPDRELPRTESLKDTIGRVM PYWKCIIFPALMYKDSLLVVAHGNSLRGIIKHLKGISDTDISNLNLPTAVPYVFEFDDRLVLVKDYYLGNPEEIRKRAEA VAKQGMAKK >Mature_249_residues MKRIVLLRHGESLWNKENRFTGWTDVDLSEKGVEEACKAGDALREAGFSFEAAYTSYLKRAVKTLNCVLDRLDEDWIPVE KTWRLNEKHYGMLQGLNKSETAVQYGEEQVHIWRRSYDVAPAPVGKDDPRNPGMDIRYAGVPDRELPRTESLKDTIGRVM PYWKCIIFPALMYKDSLLVVAHGNSLRGIIKHLKGISDTDISNLNLPTAVPYVFEFDDRLVLVKDYYLGNPEEIRKRAEA VAKQGMAKK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=249, Percent_Identity=53.0120481927711, Blast_Score=271, Evalue=3e-73, Organism=Homo sapiens, GI4505753, Length=250, Percent_Identity=54.8, Blast_Score=265, Evalue=4e-71, Organism=Homo sapiens, GI71274132, Length=250, Percent_Identity=52.4, Blast_Score=247, Evalue=9e-66, Organism=Homo sapiens, GI4502445, Length=252, Percent_Identity=45.2380952380952, Blast_Score=236, Evalue=1e-62, Organism=Homo sapiens, GI40353764, Length=252, Percent_Identity=45.2380952380952, Blast_Score=236, Evalue=1e-62, Organism=Homo sapiens, GI310129614, Length=161, Percent_Identity=57.7639751552795, Blast_Score=181, Evalue=4e-46, Organism=Escherichia coli, GI1786970, Length=248, Percent_Identity=58.0645161290323, Blast_Score=291, Evalue=2e-80, Organism=Saccharomyces cerevisiae, GI6322697, Length=245, Percent_Identity=48.5714285714286, Blast_Score=240, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6320183, Length=304, Percent_Identity=32.2368421052632, Blast_Score=139, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6324516, Length=295, Percent_Identity=29.8305084745763, Blast_Score=138, Evalue=1e-33, Organism=Drosophila melanogaster, GI24646216, Length=250, Percent_Identity=51.6, Blast_Score=254, Evalue=3e-68, Organism=Drosophila melanogaster, GI85725270, Length=250, Percent_Identity=51.2, Blast_Score=244, Evalue=5e-65, Organism=Drosophila melanogaster, GI85725272, Length=250, Percent_Identity=51.2, Blast_Score=244, Evalue=5e-65, Organism=Drosophila melanogaster, GI24650981, Length=250, Percent_Identity=51.2, Blast_Score=244, Evalue=5e-65, Organism=Drosophila melanogaster, GI28571817, Length=252, Percent_Identity=38.8888888888889, Blast_Score=174, Evalue=5e-44, Organism=Drosophila melanogaster, GI24648979, Length=252, Percent_Identity=38.8888888888889, Blast_Score=174, Evalue=6e-44, Organism=Drosophila melanogaster, GI28571815, Length=252, Percent_Identity=38.8888888888889, Blast_Score=174, Evalue=6e-44,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 28490; Mature: 28490
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00559 MOLYBDOPTERIN_EUK ; PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIVLLRHGESLWNKENRFTGWTDVDLSEKGVEEACKAGDALREAGFSFEAAYTSYLKR CCEEEEEECCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AVKTLNCVLDRLDEDWIPVEKTWRLNEKHYGMLQGLNKSETAVQYGEEQVHIWRRSYDVA HHHHHHHHHHHHCCCCCCCCHHEECCCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCC PAPVGKDDPRNPGMDIRYAGVPDRELPRTESLKDTIGRVMPYWKCIIFPALMYKDSLLVV CCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE AHGNSLRGIIKHLKGISDTDISNLNLPTAVPYVFEFDDRLVLVKDYYLGNPEEIRKRAEA ECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHH VAKQGMAKK HHHCCCCCC >Mature Secondary Structure MKRIVLLRHGESLWNKENRFTGWTDVDLSEKGVEEACKAGDALREAGFSFEAAYTSYLKR CCEEEEEECCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AVKTLNCVLDRLDEDWIPVEKTWRLNEKHYGMLQGLNKSETAVQYGEEQVHIWRRSYDVA HHHHHHHHHHHHCCCCCCCCHHEECCCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCC PAPVGKDDPRNPGMDIRYAGVPDRELPRTESLKDTIGRVMPYWKCIIFPALMYKDSLLVV CCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE AHGNSLRGIIKHLKGISDTDISNLNLPTAVPYVFEFDDRLVLVKDYYLGNPEEIRKRAEA ECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHH VAKQGMAKK HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]