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The map label for this gene is 150006015

Identifier: 150006015

GI number: 150006015

Start: 4370736

End: 4371191

Strand: Reverse

Name: 150006015

Synonym: BVU_3513

Alternate gene names: NA

Gene position: 4371191-4370736 (Counterclockwise)

Preceding gene: 150006016

Following gene: 150006014

Centisome position: 84.66

GC content: 38.38

Gene sequence:

>456_bases
ATGAGAGGATTTGATTTCGATAAAGCGCTGGTAGCCCTTCAGAATGAACTGCATTGTTTTGCATATAAACTGACTGCTGA
CAAGGATGAAGCAGAAGACTTGTTGCAGGAAACAATGTTGAGGACGTTGGATAATAAGGATAAGTTTGATTCCGGTACGA
ATTTTAAAGGCTGGATGTATACCATCATGCGCAATGCATTTATCAATAATTGCCGGACAAAGAAAATACGAGGGAATTTA
TATGTATTATCAGAACCTAAATATCATTTCCTGTTAAGGGACGACTCTTTCATTTTCGTGGATAACGGGCATGATGCAAA
AGAGATAAGGGAAGCCCTTAAAACATTGCCTAAAGCACATTATGTCGTTTTTATGTTGTACCGGAGTCAAATATCGGGAA
ATAGCCGCAAAGATAAGAGTGTCACTGGGTACGATAAAAAGCCGTATCTTTTATAG

Upstream 100 bases:

>100_bases
ATTGATGTCAAATAAGATATCTTGATGAGACTCTACAGAAGGCATTTCTTATTATCAGGGAATGCCTTCACCCGGATATT
TGAATTCCAAAATAAATATA

Downstream 100 bases:

>100_bases
CAGAAAAAGGCTAAAACAGTTGCTTTCTGATTTTGCCTGATTAATTAAAATATAAAAAACAAATTATGGATAACAAGTAT
ATTGGAATTCTGACTTCCGG

Product: RNA polymerase ECF-type sigma factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; RNA Polymerase Sigma Factor Sigma-70 Family; Sigma-; Extracytoplasmic Function AlteRNAtive Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Factor; ECF Subfamily RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF-Family Sigma Factor H

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRGFDFDKALVALQNELHCFAYKLTADKDEAEDLLQETMLRTLDNKDKFDSGTNFKGWMYTIMRNAFINNCRTKKIRGNL
YVLSEPKYHFLLRDDSFIFVDNGHDAKEIREALKTLPKAHYVVFMLYRSQISGNSRKDKSVTGYDKKPYLL

Sequences:

>Translated_151_residues
MRGFDFDKALVALQNELHCFAYKLTADKDEAEDLLQETMLRTLDNKDKFDSGTNFKGWMYTIMRNAFINNCRTKKIRGNL
YVLSEPKYHFLLRDDSFIFVDNGHDAKEIREALKTLPKAHYVVFMLYRSQISGNSRKDKSVTGYDKKPYLL
>Mature_151_residues
MRGFDFDKALVALQNELHCFAYKLTADKDEAEDLLQETMLRTLDNKDKFDSGTNFKGWMYTIMRNAFINNCRTKKIRGNL
YVLSEPKYHFLLRDDSFIFVDNGHDAKEIREALKTLPKAHYVVFMLYRSQISGNSRKDKSVTGYDKKPYLL

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17722; Mature: 17722

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGFDFDKALVALQNELHCFAYKLTADKDEAEDLLQETMLRTLDNKDKFDSGTNFKGWMY
CCCCCHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
TIMRNAFINNCRTKKIRGNLYVLSEPKYHFLLRDDSFIFVDNGHDAKEIREALKTLPKAH
HHHHHHHHCCCCCEEECCCEEEEECCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCHHH
YVVFMLYRSQISGNSRKDKSVTGYDKKPYLL
HHHHHEEHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRGFDFDKALVALQNELHCFAYKLTADKDEAEDLLQETMLRTLDNKDKFDSGTNFKGWMY
CCCCCHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
TIMRNAFINNCRTKKIRGNLYVLSEPKYHFLLRDDSFIFVDNGHDAKEIREALKTLPKAH
HHHHHHHHCCCCCEEECCCEEEEECCCEEEEEECCCEEEEECCCCHHHHHHHHHHCCHHH
YVVFMLYRSQISGNSRKDKSVTGYDKKPYLL
HHHHHEEHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA