| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006005
Identifier: 150006005
GI number: 150006005
Start: 4356662
End: 4358440
Strand: Reverse
Name: 150006005
Synonym: BVU_3503
Alternate gene names: NA
Gene position: 4358440-4356662 (Counterclockwise)
Preceding gene: 150006006
Following gene: 150006004
Centisome position: 84.41
GC content: 48.57
Gene sequence:
>1779_bases ATGATTGGAGGCGTGGATATTCCACGACACAACGGGATCCAGGTCCTAAATGAACAAAAGTCCAAAAACGAATGGTACAG AGTGCTGGCCAACGCCTACCTGACCATCAAACTGTTGGAAGGACTGGAATACAAGCTCAGCCTGAGCGGAGACATCCGCT ATTCAAACGACTATCTGAAGCTGACTAAGGACCATCCCTACGGCAGTCCGAAAGGTGAGATTACAGACTATCGTTCGATG ATGCAGAATTATCTGATCGATAATACATTGACTTATACCAAACAGATCAAGGACTTCAATTTCACGGCATTGGGAGGGTA CTCCATGCAAGAAATCAACACAGATGCCAGTTCTATTGTCGGCAAGGACTTCCCGTCTTCACAATTTGACTACATCAACG CGGCAGGTAGAATCAACAGCGCTTCTACCACCGGAGGAAAGAATCGACTCATCTCTACCTTCTTCCGATTGAACATGGGT TATGCGGACAGATACCTTTTCACCTTCTCTATCCGTGCAGACGGTTCATCCAAGTTCGCTGACGGTAACCAATGGGGTAC CTTCCCATCGGTGTCAGGTGCTTGGCGCATCAGCAACGAATCCTTTTTTCCAAAAGACGGAATCATCTCGGACCTGAAGC TGCGTGCCAGCTGGGGTATGACCGGTAACCAGGAAGGAATTGGAAACTATGACTCCCGTTCACTGGCAAATGGCGGACAC AACTACAACGGCCAGGACGGCATTGCTATCACCACCCTGGCCAATCCGGACTTGAAATGGGAAAAGTCCGACCAGACAAA CATCGGTCTGGACCTGTCGCTGTTCAATGACAGAGTCACTGTCGGTATGGACTATTTCATCAAGAACACGAAAGACTTGC TTTATGACCGCCCGCTGCATACTACAACTGGATTCTCATCCATTACCCAAAACATCGGCAGCATGCGAAACACCGGTTTC GAATTCAATGTAGAGAGTCACAACATCATGAACGACCGGTTCAGCTGGGATACACAGTTCAACATCTCAACGATCAAGAA CAAGCTGACCTCACTGATTGATGAAAAGCCCATTCCTGTAGGCAACCATGTCCTTCAGGTGGGACAACCCATCGGATCCT TCTACATGTATAAAATGGATGGTATCTATCAAGATAATCAAGAGGTTCCTGAAAAACTTTATGCCAAGGGGGTTCGTGCC GGTGACATCAAGTATGCAGACAAGGACAATGATGGTGATTTGACACCCGCCGACAAGGAAATCGTCGGAAAGCCCCTTCC GGATTTCTTCGGTGGTCTCACCAACCGGTTCAGATACGGCAATTTCGACCTGACCATCTTCAACACTTTCTCCGTTGGCA ACGATGTCTATGCTACCGGTATGGGTGGTATTGATGCCGTTGGACACAACAACTACGGCATGCGTAAGGACATTGCTGCC AACCGATGGACCGGCCCCGGCACAAACAACTCGATACCTCGTGCCATGATCAGCACGCACAACACACAGGCATCTACCTA CCTGCTTCATGATGGCTCATACTTCAAATTCAAGGATGTGACACTGGGGTATACCCTTCCGTCAAACCTGACCCAGAAGC TGAACATCAGCAATATGCGTGTGTACCTGTCCGCACAGAATCTGTGGACCATCAGCTCTTATCCTGGATATGACCCTGAA GTCAGCTACTCAGTCAACAATTCCAAGACAATGGGCGAGGATGCCATGACCGTTCCTCAGTTGCGTACGTTTGTCTGCGG CTTCAATCTTACTTTCTAA
Upstream 100 bases:
>100_bases TAACAACCGCGTTCCCAATGACAACGTCGGCAACGGCATCTTTACACGCTCCATCGAGCAGCGGCCGTTTGATGTGCCGT TCAAAGAAGATGGAAGATAC
Downstream 100 bases:
>100_bases ATATAATTCATTTATAATCGATATTCATCATGAAACTAAATCATCTGATATATACATTAATGCTGGGCACCGCGTTGGGT ACCAGTTCCTGCTCCTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NB-Dependent Receptor; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Plug Domain Protein; Nb-Dependent Receptor Plug; Nb-Dependent Receptor; Outer Membrane Receptor RagA Protein; Surface Membrane Protein; NB-Linked Outer Membrane Protein; Outer Membrane Receptor; NB Dependent/Ligand-Gated Channel; Receptor Antigen RagA
Number of amino acids: Translated: 592; Mature: 592
Protein sequence:
>592_residues MIGGVDIPRHNGIQVLNEQKSKNEWYRVLANAYLTIKLLEGLEYKLSLSGDIRYSNDYLKLTKDHPYGSPKGEITDYRSM MQNYLIDNTLTYTKQIKDFNFTALGGYSMQEINTDASSIVGKDFPSSQFDYINAAGRINSASTTGGKNRLISTFFRLNMG YADRYLFTFSIRADGSSKFADGNQWGTFPSVSGAWRISNESFFPKDGIISDLKLRASWGMTGNQEGIGNYDSRSLANGGH NYNGQDGIAITTLANPDLKWEKSDQTNIGLDLSLFNDRVTVGMDYFIKNTKDLLYDRPLHTTTGFSSITQNIGSMRNTGF EFNVESHNIMNDRFSWDTQFNISTIKNKLTSLIDEKPIPVGNHVLQVGQPIGSFYMYKMDGIYQDNQEVPEKLYAKGVRA GDIKYADKDNDGDLTPADKEIVGKPLPDFFGGLTNRFRYGNFDLTIFNTFSVGNDVYATGMGGIDAVGHNNYGMRKDIAA NRWTGPGTNNSIPRAMISTHNTQASTYLLHDGSYFKFKDVTLGYTLPSNLTQKLNISNMRVYLSAQNLWTISSYPGYDPE VSYSVNNSKTMGEDAMTVPQLRTFVCGFNLTF
Sequences:
>Translated_592_residues MIGGVDIPRHNGIQVLNEQKSKNEWYRVLANAYLTIKLLEGLEYKLSLSGDIRYSNDYLKLTKDHPYGSPKGEITDYRSM MQNYLIDNTLTYTKQIKDFNFTALGGYSMQEINTDASSIVGKDFPSSQFDYINAAGRINSASTTGGKNRLISTFFRLNMG YADRYLFTFSIRADGSSKFADGNQWGTFPSVSGAWRISNESFFPKDGIISDLKLRASWGMTGNQEGIGNYDSRSLANGGH NYNGQDGIAITTLANPDLKWEKSDQTNIGLDLSLFNDRVTVGMDYFIKNTKDLLYDRPLHTTTGFSSITQNIGSMRNTGF EFNVESHNIMNDRFSWDTQFNISTIKNKLTSLIDEKPIPVGNHVLQVGQPIGSFYMYKMDGIYQDNQEVPEKLYAKGVRA GDIKYADKDNDGDLTPADKEIVGKPLPDFFGGLTNRFRYGNFDLTIFNTFSVGNDVYATGMGGIDAVGHNNYGMRKDIAA NRWTGPGTNNSIPRAMISTHNTQASTYLLHDGSYFKFKDVTLGYTLPSNLTQKLNISNMRVYLSAQNLWTISSYPGYDPE VSYSVNNSKTMGEDAMTVPQLRTFVCGFNLTF >Mature_592_residues MIGGVDIPRHNGIQVLNEQKSKNEWYRVLANAYLTIKLLEGLEYKLSLSGDIRYSNDYLKLTKDHPYGSPKGEITDYRSM MQNYLIDNTLTYTKQIKDFNFTALGGYSMQEINTDASSIVGKDFPSSQFDYINAAGRINSASTTGGKNRLISTFFRLNMG YADRYLFTFSIRADGSSKFADGNQWGTFPSVSGAWRISNESFFPKDGIISDLKLRASWGMTGNQEGIGNYDSRSLANGGH NYNGQDGIAITTLANPDLKWEKSDQTNIGLDLSLFNDRVTVGMDYFIKNTKDLLYDRPLHTTTGFSSITQNIGSMRNTGF EFNVESHNIMNDRFSWDTQFNISTIKNKLTSLIDEKPIPVGNHVLQVGQPIGSFYMYKMDGIYQDNQEVPEKLYAKGVRA GDIKYADKDNDGDLTPADKEIVGKPLPDFFGGLTNRFRYGNFDLTIFNTFSVGNDVYATGMGGIDAVGHNNYGMRKDIAA NRWTGPGTNNSIPRAMISTHNTQASTYLLHDGSYFKFKDVTLGYTLPSNLTQKLNISNMRVYLSAQNLWTISSYPGYDPE VSYSVNNSKTMGEDAMTVPQLRTFVCGFNLTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66261; Mature: 66261
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGGVDIPRHNGIQVLNEQKSKNEWYRVLANAYLTIKLLEGLEYKLSLSGDIRYSNDYLK CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHEEEEEEECCCEEEEEECCCEEECCCEEE LTKDHPYGSPKGEITDYRSMMQNYLIDNTLTYTKQIKDFNFTALGGYSMQEINTDASSIV EECCCCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHCCCCEEEECCCCHHHCCCCHHHHH GKDFPSSQFDYINAAGRINSASTTGGKNRLISTFFRLNMGYADRYLFTFSIRADGSSKFA CCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCC DGNQWGTFPSVSGAWRISNESFFPKDGIISDLKLRASWGMTGNQEGIGNYDSRSLANGGH CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCC NYNGQDGIAITTLANPDLKWEKSDQTNIGLDLSLFNDRVTVGMDYFIKNTKDLLYDRPLH CCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEEEHHHHCCCHHHHCCCCCC TTTGFSSITQNIGSMRNTGFEFNVESHNIMNDRFSWDTQFNISTIKNKLTSLIDEKPIPV CCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCC GNHVLQVGQPIGSFYMYKMDGIYQDNQEVPEKLYAKGVRAGDIKYADKDNDGDLTPADKE CCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHH IVGKPLPDFFGGLTNRFRYGNFDLTIFNTFSVGNDVYATGMGGIDAVGHNNYGMRKDIAA HCCCCCHHHHHHHHHCEECCCEEEEEEEEECCCCCEEEECCCCEEECCCCCCCCCCCCCC NRWTGPGTNNSIPRAMISTHNTQASTYLLHDGSYFKFKDVTLGYTLPSNLTQKLNISNMR CCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCEEEEEEEEEEEECCCCCHHHCCCCEEE VYLSAQNLWTISSYPGYDPEVSYSVNNSKTMGEDAMTVPQLRTFVCGFNLTF EEEEECCEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCEEECC >Mature Secondary Structure MIGGVDIPRHNGIQVLNEQKSKNEWYRVLANAYLTIKLLEGLEYKLSLSGDIRYSNDYLK CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHEEEEEEECCCEEEEEECCCEEECCCEEE LTKDHPYGSPKGEITDYRSMMQNYLIDNTLTYTKQIKDFNFTALGGYSMQEINTDASSIV EECCCCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHCCCCEEEECCCCHHHCCCCHHHHH GKDFPSSQFDYINAAGRINSASTTGGKNRLISTFFRLNMGYADRYLFTFSIRADGSSKFA CCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCC DGNQWGTFPSVSGAWRISNESFFPKDGIISDLKLRASWGMTGNQEGIGNYDSRSLANGGH CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCC NYNGQDGIAITTLANPDLKWEKSDQTNIGLDLSLFNDRVTVGMDYFIKNTKDLLYDRPLH CCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEEEHHHHCCCHHHHCCCCCC TTTGFSSITQNIGSMRNTGFEFNVESHNIMNDRFSWDTQFNISTIKNKLTSLIDEKPIPV CCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCC GNHVLQVGQPIGSFYMYKMDGIYQDNQEVPEKLYAKGVRAGDIKYADKDNDGDLTPADKE CCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHH IVGKPLPDFFGGLTNRFRYGNFDLTIFNTFSVGNDVYATGMGGIDAVGHNNYGMRKDIAA HCCCCCHHHHHHHHHCEECCCEEEEEEEEECCCCCEEEECCCCEEECCCCCCCCCCCCCC NRWTGPGTNNSIPRAMISTHNTQASTYLLHDGSYFKFKDVTLGYTLPSNLTQKLNISNMR CCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCEEEEEEEEEEEECCCCCHHHCCCCEEE VYLSAQNLWTISSYPGYDPEVSYSVNNSKTMGEDAMTVPQLRTFVCGFNLTF EEEEECCEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA