| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005951
Identifier: 150005951
GI number: 150005951
Start: 4297177
End: 4298484
Strand: Reverse
Name: 150005951
Synonym: BVU_3449
Alternate gene names: NA
Gene position: 4298484-4297177 (Counterclockwise)
Preceding gene: 150005952
Following gene: 150005950
Centisome position: 83.25
GC content: 28.98
Gene sequence:
>1308_bases ATGCCATCTGTTCTTCTATTCATCTACTTTTGTTTCGTTCTTCTTAAAGATGTGAAAAAAGGTATCATACAAATAGTTGT TATTTTGCAGATATTCATATATTTAACTCTGTGGAATACTAGTCTTCGCCTGATTTATCCGACATCTGTTGTGGCTATTT GTATTTTTGTTTATCGGAAATGCAGAAAAAGAAGATTAGTTATATATAGATCAAAAAAAGGAAAATATCCCATATCGTTA ATTCTTATTTCAGTCTTAACTTCAATCAGCTATTTAATTTCTAATTATTTGGCATTATATCCTCCTGATAACATGCTGAC CTTTGCTAACATATATTTCTTTTTCATTTTACCCGTGTTTTTATGGTATTCATTGGATTCTAGAAAATATATGATATATT GTTTGCAACTTCTTAGTGGATGTATGTTATTTGCCTGTGTTTATTCTATTATAGAAGTTCTTTTTAATAAGAATATTATT CAGGACGTATTGCTGAGCTTATTTGATGTACATGGATATATAGCCCAAGGTGCGGAAAGATATGGTTTTAAACGAAGTAA TTCTATATTTTCTTATTATCAGCCTTTTGCTTTATATTGTTGTATGTGTTTTTATCTTTACTTTTTTTGTAGTCGGTATT ATAATTATCCATTGAATAAAAATAAAGTAACAAAGCTATTATATTTCCTTCCATTATGCACTATTCTTACAGGGACTAGG GCTGGGTATGTTGCCATTCTTATTGGTATACTGCCTTATTTATTGAGTGTAAATATTTTTAGGTATAAAGTTTTTTATAG AATAGTAGGTGTGTTTTTAGTATCATGTTTGTTTTTTTGGAAATTCTATTTTACTCTTATTTATTCTACTTTATTTGCTA ACAAAATGGACGTAGGTAGTAGCAGTGGTATGAGACTAGAGCAATGGGGATCTATTTTATGGGCTTTTGAGCAAAATGAA TTATGGGGAAATGGGAGCTCATATTTGTGGAATGTTGCCACACAGAATAATTATGAAATATTAGGTGCTGAAAGTATTTG GTTTTCTTTATTGATAGATTATGGAATAATGGGTGGCTTAATGTTTATTTTTCTTGTATTAGTATGTTGTTTTTTGATTT ATAAATGTCAGAAAACTGCTGTGCTTTTTCCTGTTATATATTTTGTTTTTTTATCTCTATCTGCTCCGATTGATGAAAAT ATAAATATTCTGATGACTTTTGTTGTTATCTTTTTAAGAATGGACTATTGGAGTCGAGATTCTGAATTAAAGTGGTGTAA TATAGTTATATCATCTACTCATAGGTGA
Upstream 100 bases:
>100_bases AATTTTTTTTGTGCTGTCAATTCCCTTGTATAGATTCAATCCTGTAAAAGAGAAAAAAAAGGCCTATTCTATGTTCCTAA TAGACAATAAATAATAAAAG
Downstream 100 bases:
>100_bases ACAAATGGAAGTATTGAAATGAAATTTTTTGTTTTTGGTGGAGGATTAGGTAACCAACTTTTCCAGTATAGTTATTATAG ATATTTGAAGAAGAAATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MPSVLLFIYFCFVLLKDVKKGIIQIVVILQIFIYLTLWNTSLRLIYPTSVVAICIFVYRKCRKRRLVIYRSKKGKYPISL ILISVLTSISYLISNYLALYPPDNMLTFANIYFFFILPVFLWYSLDSRKYMIYCLQLLSGCMLFACVYSIIEVLFNKNII QDVLLSLFDVHGYIAQGAERYGFKRSNSIFSYYQPFALYCCMCFYLYFFCSRYYNYPLNKNKVTKLLYFLPLCTILTGTR AGYVAILIGILPYLLSVNIFRYKVFYRIVGVFLVSCLFFWKFYFTLIYSTLFANKMDVGSSSGMRLEQWGSILWAFEQNE LWGNGSSYLWNVATQNNYEILGAESIWFSLLIDYGIMGGLMFIFLVLVCCFLIYKCQKTAVLFPVIYFVFLSLSAPIDEN INILMTFVVIFLRMDYWSRDSELKWCNIVISSTHR
Sequences:
>Translated_435_residues MPSVLLFIYFCFVLLKDVKKGIIQIVVILQIFIYLTLWNTSLRLIYPTSVVAICIFVYRKCRKRRLVIYRSKKGKYPISL ILISVLTSISYLISNYLALYPPDNMLTFANIYFFFILPVFLWYSLDSRKYMIYCLQLLSGCMLFACVYSIIEVLFNKNII QDVLLSLFDVHGYIAQGAERYGFKRSNSIFSYYQPFALYCCMCFYLYFFCSRYYNYPLNKNKVTKLLYFLPLCTILTGTR AGYVAILIGILPYLLSVNIFRYKVFYRIVGVFLVSCLFFWKFYFTLIYSTLFANKMDVGSSSGMRLEQWGSILWAFEQNE LWGNGSSYLWNVATQNNYEILGAESIWFSLLIDYGIMGGLMFIFLVLVCCFLIYKCQKTAVLFPVIYFVFLSLSAPIDEN INILMTFVVIFLRMDYWSRDSELKWCNIVISSTHR >Mature_434_residues PSVLLFIYFCFVLLKDVKKGIIQIVVILQIFIYLTLWNTSLRLIYPTSVVAICIFVYRKCRKRRLVIYRSKKGKYPISLI LISVLTSISYLISNYLALYPPDNMLTFANIYFFFILPVFLWYSLDSRKYMIYCLQLLSGCMLFACVYSIIEVLFNKNIIQ DVLLSLFDVHGYIAQGAERYGFKRSNSIFSYYQPFALYCCMCFYLYFFCSRYYNYPLNKNKVTKLLYFLPLCTILTGTRA GYVAILIGILPYLLSVNIFRYKVFYRIVGVFLVSCLFFWKFYFTLIYSTLFANKMDVGSSSGMRLEQWGSILWAFEQNEL WGNGSSYLWNVATQNNYEILGAESIWFSLLIDYGIMGGLMFIFLVLVCCFLIYKCQKTAVLFPVIYFVFLSLSAPIDENI NILMTFVVIFLRMDYWSRDSELKWCNIVISSTHR
Specific function: Unknown
COG id: COG3307
COG function: function code M; Lipid A core - O-antigen ligase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51134; Mature: 51003
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVLLFIYFCFVLLKDVKKGIIQIVVILQIFIYLTLWNTSLRLIYPTSVVAICIFVYRK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHH CRKRRLVIYRSKKGKYPISLILISVLTSISYLISNYLALYPPDNMLTFANIYFFFILPVF HHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHH LWYSLDSRKYMIYCLQLLSGCMLFACVYSIIEVLFNKNIIQDVLLSLFDVHGYIAQGAER HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH YGFKRSNSIFSYYQPFALYCCMCFYLYFFCSRYYNYPLNKNKVTKLLYFLPLCTILTGTR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC AGYVAILIGILPYLLSVNIFRYKVFYRIVGVFLVSCLFFWKFYFTLIYSTLFANKMDVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSGMRLEQWGSILWAFEQNELWGNGSSYLWNVATQNNYEILGAESIWFSLLIDYGIMGGL CCCCCHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHH MFIFLVLVCCFLIYKCQKTAVLFPVIYFVFLSLSAPIDENINILMTFVVIFLRMDYWSRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC SELKWCNIVISSTHR CCCCEEEEEECCCCC >Mature Secondary Structure PSVLLFIYFCFVLLKDVKKGIIQIVVILQIFIYLTLWNTSLRLIYPTSVVAICIFVYRK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHH CRKRRLVIYRSKKGKYPISLILISVLTSISYLISNYLALYPPDNMLTFANIYFFFILPVF HHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHH LWYSLDSRKYMIYCLQLLSGCMLFACVYSIIEVLFNKNIIQDVLLSLFDVHGYIAQGAER HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH YGFKRSNSIFSYYQPFALYCCMCFYLYFFCSRYYNYPLNKNKVTKLLYFLPLCTILTGTR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC AGYVAILIGILPYLLSVNIFRYKVFYRIVGVFLVSCLFFWKFYFTLIYSTLFANKMDVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSGMRLEQWGSILWAFEQNELWGNGSSYLWNVATQNNYEILGAESIWFSLLIDYGIMGGL CCCCCHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHH MFIFLVLVCCFLIYKCQKTAVLFPVIYFVFLSLSAPIDENINILMTFVVIFLRMDYWSRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC SELKWCNIVISSTHR CCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA