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The map label for this gene is yadS [H]

Identifier: 150005854

GI number: 150005854

Start: 4184999

End: 4185613

Strand: Reverse

Name: yadS [H]

Synonym: BVU_3350

Alternate gene names: 150005854

Gene position: 4185613-4184999 (Counterclockwise)

Preceding gene: 150005856

Following gene: 150005853

Centisome position: 81.07

GC content: 41.95

Gene sequence:

>615_bases
ATGCTAACATTTGTTCAAGTTTTAGATTTTATAGGCACGTTTGCCTTTGCCATCAGTGGTATCAGATTGGCGTCTGCCAA
ACAGTTTGACTGGTTTGGTGCATATGTAGTGGGTTTGGCAACGGCTATCGGAGGAGGTACTATCCGTGATGTGCTTCTAG
ATGTGACTCCGGGTTGGATGACCGACCCTATATATTTAATATGTACAGGACTTGCATTGTTTTGGGTAATTGCTTTCGGC
AAGTATCTGATTCATATGCATAACACTTTTTTCCTGTTCGACAGCATCGGTCTGGCACTATTTACAGTAGTGGGAGTAGG
CAAAAGTATTGCTCTCGGATATCCTTTTTGGGTAGCTATAATCATGGGTAGTATCACTGGGGCCGCAGGTGGTGTGCTCC
GCGATGTTTTTATTAATGAAATTCCGCTTATTTTTCGTAAAGAAATTTATGCAATGGCCTGTGTGGTGGGGGGATTGGCC
TATTGGATATGTGATCTGTTTGGTCTGGAAGCCTTTATTTGCCAGATAATAGGAGGTAGTACTGTGTTTTTGGCGCGTAT
TTTAGCTGTTAAATATAGTATCTGTTTACCAATTTTAAAGGGGGAACAACGCTAA

Upstream 100 bases:

>100_bases
ATAATTGTTACTTTCATCTTATTTTAAGCTATTTTCTGAACACAAAAATACATTTTCTTATCGAATTTATTCGTTACTTT
GCAGACAAATAACAACCATT

Downstream 100 bases:

>100_bases
ATAGCACCTGAAAACTATCAAAACAGGGGGTAAAAACTGATAAATGACGGTTTTTACCCCCTATTTTGATAGTTTTTTCT
TTGACACCTATTTAAAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLTFVQVLDFIGTFAFAISGIRLASAKQFDWFGAYVVGLATAIGGGTIRDVLLDVTPGWMTDPIYLICTGLALFWVIAFG
KYLIHMHNTFFLFDSIGLALFTVVGVGKSIALGYPFWVAIIMGSITGAAGGVLRDVFINEIPLIFRKEIYAMACVVGGLA
YWICDLFGLEAFICQIIGGSTVFLARILAVKYSICLPILKGEQR

Sequences:

>Translated_204_residues
MLTFVQVLDFIGTFAFAISGIRLASAKQFDWFGAYVVGLATAIGGGTIRDVLLDVTPGWMTDPIYLICTGLALFWVIAFG
KYLIHMHNTFFLFDSIGLALFTVVGVGKSIALGYPFWVAIIMGSITGAAGGVLRDVFINEIPLIFRKEIYAMACVVGGLA
YWICDLFGLEAFICQIIGGSTVFLARILAVKYSICLPILKGEQR
>Mature_204_residues
MLTFVQVLDFIGTFAFAISGIRLASAKQFDWFGAYVVGLATAIGGGTIRDVLLDVTPGWMTDPIYLICTGLALFWVIAFG
KYLIHMHNTFFLFDSIGLALFTVVGVGKSIALGYPFWVAIIMGSITGAAGGVLRDVFINEIPLIFRKEIYAMACVVGGLA
YWICDLFGLEAFICQIIGGSTVFLARILAVKYSICLPILKGEQR

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=196, Percent_Identity=37.7551020408163, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI87082304, Length=149, Percent_Identity=34.8993288590604, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22186; Mature: 22186

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFVQVLDFIGTFAFAISGIRLASAKQFDWFGAYVVGLATAIGGGTIRDVLLDVTPGWM
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
TDPIYLICTGLALFWVIAFGKYLIHMHNTFFLFDSIGLALFTVVGVGKSIALGYPFWVAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHH
IMGSITGAAGGVLRDVFINEIPLIFRKEIYAMACVVGGLAYWICDLFGLEAFICQIIGGS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
TVFLARILAVKYSICLPILKGEQR
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLTFVQVLDFIGTFAFAISGIRLASAKQFDWFGAYVVGLATAIGGGTIRDVLLDVTPGWM
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
TDPIYLICTGLALFWVIAFGKYLIHMHNTFFLFDSIGLALFTVVGVGKSIALGYPFWVAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHH
IMGSITGAAGGVLRDVFINEIPLIFRKEIYAMACVVGGLAYWICDLFGLEAFICQIIGGS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
TVFLARILAVKYSICLPILKGEQR
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA