| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005831
Identifier: 150005831
GI number: 150005831
Start: 4162693
End: 4163979
Strand: Reverse
Name: 150005831
Synonym: BVU_3327
Alternate gene names: NA
Gene position: 4163979-4162693 (Counterclockwise)
Preceding gene: 150005832
Following gene: 150005830
Centisome position: 80.65
GC content: 47.01
Gene sequence:
>1287_bases ATGCTGGACAGAACCACCCCACCGCCAATCCGCCAACTAAGCGAATTCAGTATAACCCGTCCCGACAGGAGGACGATGAA GAACGGGATGCCTTTGAATATCATTCATGCGGGAACCGAGGATGTTGTACGTTTCGATCTTCTGATAGGAGGCGGACAAT GGAATCAGGAACAGCCGTTGCAGGCTATGTTTGCCAACAGGATGCTGCGTGAGGGAGCTGGGAATTTAACGTCTTCACAG ATTGCGGAGCGATTGGATTATTATGGAGCCTGGCTGGAGTTATCTTCTTCCGTGAACTATGGATTCATAACACTTTACTC TCTGAATAAATATTTTGCCCGCACGCTGGCCGTCATATCCGAGATGATAAAGGCTCCTACGTTTCCGGCAAAGGAACTTT CCGTGGTGGCCGATACGAACAAACAGCAATTCCTGGTGAACAGCACCCGGGTGGAAATGATTGCCCGAAAGCAGCTGAAT ACAGCCTTGTTCGGTCCGGAGCATCCTTTCGGGCGCTATGCGGTAGCGGAGGATTATGACCGGATTACCCCGGAGGTGCT CCGTTCGTTTTATCGGAAATATTATCATTCGGGCAATTGTTCGGTATATATTTCGGGAAAGGTCACATCGGAAATTATCC GTTGTATAGAAGATAACTTGGGAAGTGGACAATGGGGGGAAGTGACGGAAAAAGCAAAGACAATGCTTGTTCCTCCGGTT ACCACCAAAGAAAAGCGTATCTTTATAGAACGTGAGGATGCACTTCAAAGTTCCTTGAAAATGGGATGTTTCGTAATGGA CCGTCATCATCCGGACTTTTTGAAGGCACGTGTCATGGTCACTTTGTTCGGAGGGTATTTCGGGAGCCGTCTGATGTCCA ATATCCGTGAAGACAAGGGATATACATACGGTATCGGCGCAGGCATTGTGTCCTATCCGGGAACGGGAATACTGACTGTC AGTACCGAGGCGGCCAATGAATATGTGGATTCTATCATAACAGAAGTTTATCGGGAGATGGACAAATTGTGTAATGATCT CGTTCCTCAAGAAGAATTGGAAATGGTGAAGAACTATATGCTGGGCGATTTATGCCGGTCGTACGAGGGACCTTTTTCTT TGTCTGATGCCTGGATTTATATAGAAACGGCAGGGCTGGACGAACGCTTCTTTATCCGTTCGCTGGATGCCATTCGGGGA ATCACCAGAGAAGAAATACGCATATTGGCTCAAAAGTATTTCTGCAAAGAAAACTTAATAGAGGTCATTGCGGGTAAAAA AGTGTAA
Upstream 100 bases:
>100_bases TATTAAGGTGGGAATCAGTGAAGTGGAGACAATAGGCATTGATACGCCTCAGGATCTGGCACGTGCCGAAGCATTTTTAA AACAAAGGGAGGGGGAGTAA
Downstream 100 bases:
>100_bases TAACCTATCATGTCCAAAGATAGAAAATCGTATCTTTGGCATAATCTTATCTATTATAAGTAACGAACCAATGAAGAAAT ACGTATATATATTATTGCTT
Product: putative zinc protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MLDRTTPPPIRQLSEFSITRPDRRTMKNGMPLNIIHAGTEDVVRFDLLIGGGQWNQEQPLQAMFANRMLREGAGNLTSSQ IAERLDYYGAWLELSSSVNYGFITLYSLNKYFARTLAVISEMIKAPTFPAKELSVVADTNKQQFLVNSTRVEMIARKQLN TALFGPEHPFGRYAVAEDYDRITPEVLRSFYRKYYHSGNCSVYISGKVTSEIIRCIEDNLGSGQWGEVTEKAKTMLVPPV TTKEKRIFIEREDALQSSLKMGCFVMDRHHPDFLKARVMVTLFGGYFGSRLMSNIREDKGYTYGIGAGIVSYPGTGILTV STEAANEYVDSIITEVYREMDKLCNDLVPQEELEMVKNYMLGDLCRSYEGPFSLSDAWIYIETAGLDERFFIRSLDAIRG ITREEIRILAQKYFCKENLIEVIAGKKV
Sequences:
>Translated_428_residues MLDRTTPPPIRQLSEFSITRPDRRTMKNGMPLNIIHAGTEDVVRFDLLIGGGQWNQEQPLQAMFANRMLREGAGNLTSSQ IAERLDYYGAWLELSSSVNYGFITLYSLNKYFARTLAVISEMIKAPTFPAKELSVVADTNKQQFLVNSTRVEMIARKQLN TALFGPEHPFGRYAVAEDYDRITPEVLRSFYRKYYHSGNCSVYISGKVTSEIIRCIEDNLGSGQWGEVTEKAKTMLVPPV TTKEKRIFIEREDALQSSLKMGCFVMDRHHPDFLKARVMVTLFGGYFGSRLMSNIREDKGYTYGIGAGIVSYPGTGILTV STEAANEYVDSIITEVYREMDKLCNDLVPQEELEMVKNYMLGDLCRSYEGPFSLSDAWIYIETAGLDERFFIRSLDAIRG ITREEIRILAQKYFCKENLIEVIAGKKV >Mature_428_residues MLDRTTPPPIRQLSEFSITRPDRRTMKNGMPLNIIHAGTEDVVRFDLLIGGGQWNQEQPLQAMFANRMLREGAGNLTSSQ IAERLDYYGAWLELSSSVNYGFITLYSLNKYFARTLAVISEMIKAPTFPAKELSVVADTNKQQFLVNSTRVEMIARKQLN TALFGPEHPFGRYAVAEDYDRITPEVLRSFYRKYYHSGNCSVYISGKVTSEIIRCIEDNLGSGQWGEVTEKAKTMLVPPV TTKEKRIFIEREDALQSSLKMGCFVMDRHHPDFLKARVMVTLFGGYFGSRLMSNIREDKGYTYGIGAGIVSYPGTGILTV STEAANEYVDSIITEVYREMDKLCNDLVPQEELEMVKNYMLGDLCRSYEGPFSLSDAWIYIETAGLDERFFIRSLDAIRG ITREEIRILAQKYFCKENLIEVIAGKKV
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 48653; Mature: 48653
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDRTTPPPIRQLSEFSITRPDRRTMKNGMPLNIIHAGTEDVVRFDLLIGGGQWNQEQPL CCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCHHHEEEEEEEECCCCCCCCHH QAMFANRMLREGAGNLTSSQIAERLDYYGAWLELSSSVNYGFITLYSLNKYFARTLAVIS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEEHHHHHHHHHHHHHH EMIKAPTFPAKELSVVADTNKQQFLVNSTRVEMIARKQLNTALFGPEHPFGRYAVAEDYD HHHHCCCCCHHHEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHH RITPEVLRSFYRKYYHSGNCSVYISGKVTSEIIRCIEDNLGSGQWGEVTEKAKTMLVPPV CCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCC TTKEKRIFIEREDALQSSLKMGCFVMDRHHPDFLKARVMVTLFGGYFGSRLMSNIREDKG CCCCCEEEEEHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YTYGIGAGIVSYPGTGILTVSTEAANEYVDSIITEVYREMDKLCNDLVPQEELEMVKNYM CEEEECCCHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LGDLCRSYEGPFSLSDAWIYIETAGLDERFFIRSLDAIRGITREEIRILAQKYFCKENLI HHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EVIAGKKV HHHCCCCC >Mature Secondary Structure MLDRTTPPPIRQLSEFSITRPDRRTMKNGMPLNIIHAGTEDVVRFDLLIGGGQWNQEQPL CCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCHHHEEEEEEEECCCCCCCCHH QAMFANRMLREGAGNLTSSQIAERLDYYGAWLELSSSVNYGFITLYSLNKYFARTLAVIS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEEHHHHHHHHHHHHHH EMIKAPTFPAKELSVVADTNKQQFLVNSTRVEMIARKQLNTALFGPEHPFGRYAVAEDYD HHHHCCCCCHHHEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHH RITPEVLRSFYRKYYHSGNCSVYISGKVTSEIIRCIEDNLGSGQWGEVTEKAKTMLVPPV CCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCC TTKEKRIFIEREDALQSSLKMGCFVMDRHHPDFLKARVMVTLFGGYFGSRLMSNIREDKG CCCCCEEEEEHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YTYGIGAGIVSYPGTGILTVSTEAANEYVDSIITEVYREMDKLCNDLVPQEELEMVKNYM CEEEECCCHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LGDLCRSYEGPFSLSDAWIYIETAGLDERFFIRSLDAIRGITREEIRILAQKYFCKENLI HHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH EVIAGKKV HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]