Click here to switch to the map view.

The map label for this gene is yqeN [H]

Identifier: 150005816

GI number: 150005816

Start: 4148460

End: 4149476

Strand: Reverse

Name: yqeN [H]

Synonym: BVU_3312

Alternate gene names: 150005816

Gene position: 4149476-4148460 (Counterclockwise)

Preceding gene: 150005817

Following gene: 150005815

Centisome position: 80.37

GC content: 36.18

Gene sequence:

>1017_bases
ATGGCAAAAGAAACAACATACGAAGAGATAGCCCGTGAGCTGAAAAACCGTATCTATAAGCCTGTTTATTATCTAATGGG
TGAAGAGTCTTATTATATAGACCGGATATCTGAGTATATAGCACAAACGGTGTTAAATGAAAATGAAAAAGAATTCAATC
AGACTATTGTTTATGGGGCTGATACAGATATCGCGACTGTTATCAATGCAGCCAAGCGTTATCCCATGATGTCCAAATAT
CAAGTTGTAATAGTAAAAGAGGCTCAAAATATAAAGAATATTGAAGAGCTTGTTTATTATCTCCAAAAACCTTTGGATTC
TACAATTCTGGTGTTATGCCATAAACATGGTACATTGGATAGAAGAAAAAAATTGGCAGCTGAAATAGAGAAAGTAGGTG
TCCTTTTCGAATCGAAAAAGATTAAGGATGCCCAGCTTCCTGGGTTTATATCTTCTTACTTGAAACGTAGATCAGTAGAA
ATAGAACCTAAGGCTTCAGAAATGATGGCGGAATTTGTTGGAGCAGATTTAAGCCGTATGGCTGGAGAGTTGGAAAAATT
AATTATCACACTTCCAAGAGGACAAAAGCGGATTACTCCAGAACAGATAGAACGTAACATTGGCATAAGCAAGGATTATA
ATAATTTTGAGCTTAGGAATGCTTTGGTGGCAAAGGATGTTTTCAAGGCTAATCAGATAATAAAATATTTTGAGGAGAAT
CCCAAAACAAATCCTTTGCAGATGACCTTGTCTGTGTTATTTAATTTCTTCTCTAATTTAATGCTTGCATATTATGCTCC
TGATAAGTCAGAGCAGGGTATAGCCAATCAGCTGGGGCTTAAATCATCATGGCAGTCTAAAGACTATATGGTTGCTATGA
GGAAATATAGCGGAGTAAAGGTAATGCAAATTATTGGTGAGATTCGTTACTGTGATGCAAAATCAAAAGGAGTGGGTAAT
CCATCTTTGGGAGATGGAGATTTGCTGCGCGAACTTGTATATAAAATTCTTCATTAA

Upstream 100 bases:

>100_bases
TAGAGGAACATGTGGAGATTGGTATTGCTTCATTACAGATGATTATTGAGGAAAAGAAAACGGTCAAGCACTTAAAATTT
GACTGGTAATTTTACTGTGT

Downstream 100 bases:

>100_bases
TTAACAGGGTCAAGTAAGATTCCGATGTCCCGATGCTTTTATTTTTTAAGTGTCGGGATTCTTTTATCCTTTCTCTCAGC
AGAAATTCTGTTGATGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MAKETTYEEIARELKNRIYKPVYYLMGEESYYIDRISEYIAQTVLNENEKEFNQTIVYGADTDIATVINAAKRYPMMSKY
QVVIVKEAQNIKNIEELVYYLQKPLDSTILVLCHKHGTLDRRKKLAAEIEKVGVLFESKKIKDAQLPGFISSYLKRRSVE
IEPKASEMMAEFVGADLSRMAGELEKLIITLPRGQKRITPEQIERNIGISKDYNNFELRNALVAKDVFKANQIIKYFEEN
PKTNPLQMTLSVLFNFFSNLMLAYYAPDKSEQGIANQLGLKSSWQSKDYMVAMRKYSGVKVMQIIGEIRYCDAKSKGVGN
PSLGDGDLLRELVYKILH

Sequences:

>Translated_338_residues
MAKETTYEEIARELKNRIYKPVYYLMGEESYYIDRISEYIAQTVLNENEKEFNQTIVYGADTDIATVINAAKRYPMMSKY
QVVIVKEAQNIKNIEELVYYLQKPLDSTILVLCHKHGTLDRRKKLAAEIEKVGVLFESKKIKDAQLPGFISSYLKRRSVE
IEPKASEMMAEFVGADLSRMAGELEKLIITLPRGQKRITPEQIERNIGISKDYNNFELRNALVAKDVFKANQIIKYFEEN
PKTNPLQMTLSVLFNFFSNLMLAYYAPDKSEQGIANQLGLKSSWQSKDYMVAMRKYSGVKVMQIIGEIRYCDAKSKGVGN
PSLGDGDLLRELVYKILH
>Mature_337_residues
AKETTYEEIARELKNRIYKPVYYLMGEESYYIDRISEYIAQTVLNENEKEFNQTIVYGADTDIATVINAAKRYPMMSKYQ
VVIVKEAQNIKNIEELVYYLQKPLDSTILVLCHKHGTLDRRKKLAAEIEKVGVLFESKKIKDAQLPGFISSYLKRRSVEI
EPKASEMMAEFVGADLSRMAGELEKLIITLPRGQKRITPEQIERNIGISKDYNNFELRNALVAKDVFKANQIIKYFEENP
KTNPLQMTLSVLFNFFSNLMLAYYAPDKSEQGIANQLGLKSSWQSKDYMVAMRKYSGVKVMQIIGEIRYCDAKSKGVGNP
SLGDGDLLRELVYKILH

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: NA

Molecular weight: Translated: 38856; Mature: 38724

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKETTYEEIARELKNRIYKPVYYLMGEESYYIDRISEYIAQTVLNENEKEFNQTIVYGA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEC
DTDIATVINAAKRYPMMSKYQVVIVKEAQNIKNIEELVYYLQKPLDSTILVLCHKHGTLD
CCHHHHHHHHHHHCCCCCCEEEEEEECHHCHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
RRKKLAAEIEKVGVLFESKKIKDAQLPGFISSYLKRRSVEIEPKASEMMAEFVGADLSRM
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHH
AGELEKLIITLPRGQKRITPEQIERNIGISKDYNNFELRNALVAKDVFKANQIIKYFEEN
HHHHHHHHEECCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PKTNPLQMTLSVLFNFFSNLMLAYYAPDKSEQGIANQLGLKSSWQSKDYMVAMRKYSGVK
CCCCHHHHHHHHHHHHHHHHHEEHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCHH
VMQIIGEIRYCDAKSKGVGNPSLGDGDLLRELVYKILH
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AKETTYEEIARELKNRIYKPVYYLMGEESYYIDRISEYIAQTVLNENEKEFNQTIVYGA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEC
DTDIATVINAAKRYPMMSKYQVVIVKEAQNIKNIEELVYYLQKPLDSTILVLCHKHGTLD
CCHHHHHHHHHHHCCCCCCEEEEEEECHHCHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
RRKKLAAEIEKVGVLFESKKIKDAQLPGFISSYLKRRSVEIEPKASEMMAEFVGADLSRM
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHH
AGELEKLIITLPRGQKRITPEQIERNIGISKDYNNFELRNALVAKDVFKANQIIKYFEEN
HHHHHHHHEECCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PKTNPLQMTLSVLFNFFSNLMLAYYAPDKSEQGIANQLGLKSSWQSKDYMVAMRKYSGVK
CCCCHHHHHHHHHHHHHHHHHEEHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCHH
VMQIIGEIRYCDAKSKGVGNPSLGDGDLLRELVYKILH
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]