| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005804
Identifier: 150005804
GI number: 150005804
Start: 4128939
End: 4130156
Strand: Reverse
Name: 150005804
Synonym: BVU_3297
Alternate gene names: NA
Gene position: 4130156-4128939 (Counterclockwise)
Preceding gene: 150005805
Following gene: 150005803
Centisome position: 79.99
GC content: 33.66
Gene sequence:
>1218_bases ATGAGAAAAGTATTATTTACAGTGGCTTTATTGTTAACAGCTTGCTTTGTGTCTGCACAAGTAAGTGTTGTTAAGGAGGC TAAATCCTTGAAAAGCAAACCTGAAGAAGCTGCAAAAGCTATCGAACCGGCTTTAACTAATCCTGAAACCGCTAATGATC CGGAAACATGGAAATTAGCTGGAGATTTTCAGAAAGCAATTTATGATGAAGAAAACATGAAACTTTATTTACCCGGAGGT CAGGCAGATACAACTAAGCTTTATAACAGCTTAGCTAAGATGTATGACTTCTACTTGAAATGCGATGAAATAGAGCAGGC TAAAGTCCAAAGTGGTGAGTTAAAGAAACCCAAATTCAGAAAGAAGAATGCAGATGCTTTGAAGACTTTGCGTTTAAACC TAGTTAATGGTGGTGGTGATGCTTACAATAAAGGAGATTATGCTGATGCTCTAAAATATTTTGGATTATTTGTTGATGTA GTAAACGAGCCTATGTTTGCTGATGATGATGAGTTGAAGGCTGACACTTTGAATGCATTATATGCTTGTTATGCAACTTT AGCTGCTAATATGCTGAAAGACAATCAAGCTGTCATCAAATATGGCAATATAGGTAAGAATCATAAAGAAGAAGGTTATA GAGCATTAATGTGCTTGGCTGAAACATATGGTCAGAAAGAAGGTGGTGATTCTGCAAAATGGCTTGAAGTAATCAAAGAA GGTACTGAATCGTTTCCTAAGCAAGAATACTTTGTTGGTAATATTATGGATTATTATATTCAAAAAGGTATGGTTGATGA GGGTTTGGCTCAAATTAATAAATTGCTTGCTACGAGTGAAACTCCGTACTATCTTTATGTAAAAGGTATCTTATTGTATG AGAAAAAGCAGTATGATGATGCAGTTGCTATATTTAATAAAATTATTTCAAACAACGGAGATTTAGTTGCTGAAGCATAT TCAAAGATTGGTGATTGTTATTTTTTCCCAGCCCAGATTATTGTTGAGGAAAATGCAAAGTTAGCTATTGATGATCCCAA ATACAATGAAAACGAAAATAAGATTAAAGAGTTGTATGAGAAAGCTAAACCATATTATGAGAAGGCAAAAGAATTAAAGC CTGATAATAAAGCTTTGTGGGGAAATTATTTGCTAAATATTTATTGGAAGTTAAATAGAGCTGAATATGATTCTTTGGAA AAAGAATTAGGATATTAA
Upstream 100 bases:
>100_bases AGAGAGTGGTGGTACTACTAATTCTGATACTAATTCAGATTTAACTGCCGAAGCAAATAGTGAAGAATAAAATAAATTGT ATTATTAAATCCACAAAATC
Downstream 100 bases:
>100_bases TACGATCTTTCTATTTATTTATGCACAAAGCTCGGACTTTTCCAGTCTGGGCTTTGTTATTATCTAAAGTTTATGTATCT TTAGATATTAGTTTTTTGCG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Family Protein; TPR Repeat-Containing Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MRKVLFTVALLLTACFVSAQVSVVKEAKSLKSKPEEAAKAIEPALTNPETANDPETWKLAGDFQKAIYDEENMKLYLPGG QADTTKLYNSLAKMYDFYLKCDEIEQAKVQSGELKKPKFRKKNADALKTLRLNLVNGGGDAYNKGDYADALKYFGLFVDV VNEPMFADDDELKADTLNALYACYATLAANMLKDNQAVIKYGNIGKNHKEEGYRALMCLAETYGQKEGGDSAKWLEVIKE GTESFPKQEYFVGNIMDYYIQKGMVDEGLAQINKLLATSETPYYLYVKGILLYEKKQYDDAVAIFNKIISNNGDLVAEAY SKIGDCYFFPAQIIVEENAKLAIDDPKYNENENKIKELYEKAKPYYEKAKELKPDNKALWGNYLLNIYWKLNRAEYDSLE KELGY
Sequences:
>Translated_405_residues MRKVLFTVALLLTACFVSAQVSVVKEAKSLKSKPEEAAKAIEPALTNPETANDPETWKLAGDFQKAIYDEENMKLYLPGG QADTTKLYNSLAKMYDFYLKCDEIEQAKVQSGELKKPKFRKKNADALKTLRLNLVNGGGDAYNKGDYADALKYFGLFVDV VNEPMFADDDELKADTLNALYACYATLAANMLKDNQAVIKYGNIGKNHKEEGYRALMCLAETYGQKEGGDSAKWLEVIKE GTESFPKQEYFVGNIMDYYIQKGMVDEGLAQINKLLATSETPYYLYVKGILLYEKKQYDDAVAIFNKIISNNGDLVAEAY SKIGDCYFFPAQIIVEENAKLAIDDPKYNENENKIKELYEKAKPYYEKAKELKPDNKALWGNYLLNIYWKLNRAEYDSLE KELGY >Mature_405_residues MRKVLFTVALLLTACFVSAQVSVVKEAKSLKSKPEEAAKAIEPALTNPETANDPETWKLAGDFQKAIYDEENMKLYLPGG QADTTKLYNSLAKMYDFYLKCDEIEQAKVQSGELKKPKFRKKNADALKTLRLNLVNGGGDAYNKGDYADALKYFGLFVDV VNEPMFADDDELKADTLNALYACYATLAANMLKDNQAVIKYGNIGKNHKEEGYRALMCLAETYGQKEGGDSAKWLEVIKE GTESFPKQEYFVGNIMDYYIQKGMVDEGLAQINKLLATSETPYYLYVKGILLYEKKQYDDAVAIFNKIISNNGDLVAEAY SKIGDCYFFPAQIIVEENAKLAIDDPKYNENENKIKELYEKAKPYYEKAKELKPDNKALWGNYLLNIYWKLNRAEYDSLE KELGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45921; Mature: 45921
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVLFTVALLLTACFVSAQVSVVKEAKSLKSKPEEAAKAIEPALTNPETANDPETWKLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCEEEH GDFQKAIYDEENMKLYLPGGQADTTKLYNSLAKMYDFYLKCDEIEQAKVQSGELKKPKFR HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHH KKNADALKTLRLNLVNGGGDAYNKGDYADALKYFGLFVDVVNEPMFADDDELKADTLNAL CCCHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH YACYATLAANMLKDNQAVIKYGNIGKNHKEEGYRALMCLAETYGQKEGGDSAKWLEVIKE HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH GTESFPKQEYFVGNIMDYYIQKGMVDEGLAQINKLLATSETPYYLYVKGILLYEKKQYDD HHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEHHHHHH AVAIFNKIISNNGDLVAEAYSKIGDCYFFPAQIIVEENAKLAIDDPKYNENENKIKELYE HHHHHHHHHCCCCCCHHHHHHHHCCEEEECCEEEEECCCEEEECCCCCCCCHHHHHHHHH KAKPYYEKAKELKPDNKALWGNYLLNIYWKLNRAEYDSLEKELGY HHCHHHHHHHHCCCCCCHHHHHHEEEEEEEECCHHHHHHHHHHCC >Mature Secondary Structure MRKVLFTVALLLTACFVSAQVSVVKEAKSLKSKPEEAAKAIEPALTNPETANDPETWKLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCEEEH GDFQKAIYDEENMKLYLPGGQADTTKLYNSLAKMYDFYLKCDEIEQAKVQSGELKKPKFR HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHH KKNADALKTLRLNLVNGGGDAYNKGDYADALKYFGLFVDVVNEPMFADDDELKADTLNAL CCCHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH YACYATLAANMLKDNQAVIKYGNIGKNHKEEGYRALMCLAETYGQKEGGDSAKWLEVIKE HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH GTESFPKQEYFVGNIMDYYIQKGMVDEGLAQINKLLATSETPYYLYVKGILLYEKKQYDD HHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEHHHHHH AVAIFNKIISNNGDLVAEAYSKIGDCYFFPAQIIVEENAKLAIDDPKYNENENKIKELYE HHHHHHHHHCCCCCCHHHHHHHHCCEEEECCEEEEECCCEEEECCCCCCCCHHHHHHHHH KAKPYYEKAKELKPDNKALWGNYLLNIYWKLNRAEYDSLEKELGY HHCHHHHHHHHCCCCCCHHHHHHEEEEEEEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA