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The map label for this gene is ybeQ [H]

Identifier: 150005685

GI number: 150005685

Start: 4001153

End: 4002076

Strand: Reverse

Name: ybeQ [H]

Synonym: BVU_3175

Alternate gene names: 150005685

Gene position: 4002076-4001153 (Counterclockwise)

Preceding gene: 150005696

Following gene: 150005684

Centisome position: 77.51

GC content: 39.83

Gene sequence:

>924_bases
ATGAAAAAAAAATCAGTAATAGCTATCAATTTATGCCTTATAGCAAGCATAGTAACTCTATTCGGCAATAAGATCTATAT
GCTTTATATAGGTGACTGCCATCAATTGTGGGAAGAAGCACAAACTCACTATGTTAATCGACAATATGAAAAAGCACGCG
AGTTATTAGAAAAGATAGCTCGCATTGATACGGCCCATCATGCCCAATATCTGACAGGCGATATGTATTTAAAAGGCTTA
GGAGGTGAAATTGATTATGATAAGGCTTTGAAACTTTTTCATCAATCGGCAGCGGGCGGAAACACGTATGCTGAAAACAA
TATAGGCTTTATGTACACATATGGTTTGGGAGTCACTAAGGATTACAGCCAAGCTTTCAAATGGTTGAACAAAGCTGCCA
CTCAAGGAAATCCAGAAGCTCAAATTGGTATGGGGAGCCTTTATAAAAACGGTTGGGGAGTACGTAAGGATTGTTACATT
GCTATGACTTGGTACCTACGTTCTGTAGCTCATGGTAATACGGACGCCATGAACAATATCGGTTATTTATATAAAAACGG
ACTTGGGGTCCCCCAAGACTTTGAAGAAGCTTTTTTTTGGTTTAAAAAAGCAGCAGATAAGAATAATCCGATAGCTCAAT
ATAATATAGGAAATATGTATTGTTATGGCGAAGGAATGGAAAAAGACTTTGCTAAAGGAGCCGAGTGGCTGACCAAAGCT
GCTTTACAGGGGAATGCTCCTGCACAATACAACCTGGGACGCATGTATCAGTGGGGCAAAGGCGTAGAAAAAGACTTACA
ACAAGCCCGGTTCTGGTTCCAAAAAGCTATAGACAACGGTCATGAAAAAGCAAAGGAAGCATTAACCAAAATAAAAAGCG
ACTTATCCAAAGAAGACACCGAAGCCCCACTCCTGTTCACCTAA

Upstream 100 bases:

>100_bases
CAGAAACATCATTATCTTTTATCCCACAAAAAACTGGTAAACAAAGAGATAAGATAATGGCACGCTATTTGATTAGTCTA
CAATACTAATATATTAAGTT

Downstream 100 bases:

>100_bases
CTATAAGCCAAAAGTACTAATAGGTATAAAGACATAAAAAAACGAACATGAAACTATATTGTATTATAGCACTTTCTCTT
CTGCTTCGCCCGGAAACAGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKKKSVIAINLCLIASIVTLFGNKIYMLYIGDCHQLWEEAQTHYVNRQYEKARELLEKIARIDTAHHAQYLTGDMYLKGL
GGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKAATQGNPEAQIGMGSLYKNGWGVRKDCYI
AMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPQDFEEAFFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAEWLTKA
ALQGNAPAQYNLGRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSKEDTEAPLLFT

Sequences:

>Translated_307_residues
MKKKSVIAINLCLIASIVTLFGNKIYMLYIGDCHQLWEEAQTHYVNRQYEKARELLEKIARIDTAHHAQYLTGDMYLKGL
GGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKAATQGNPEAQIGMGSLYKNGWGVRKDCYI
AMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPQDFEEAFFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAEWLTKA
ALQGNAPAQYNLGRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSKEDTEAPLLFT
>Mature_307_residues
MKKKSVIAINLCLIASIVTLFGNKIYMLYIGDCHQLWEEAQTHYVNRQYEKARELLEKIARIDTAHHAQYLTGDMYLKGL
GGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTKDYSQAFKWLNKAATQGNPEAQIGMGSLYKNGWGVRKDCYI
AMTWYLRSVAHGNTDAMNNIGYLYKNGLGVPQDFEEAFFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAEWLTKA
ALQGNAPAQYNLGRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSKEDTEAPLLFT

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=286, Percent_Identity=29.020979020979, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI151301150, Length=288, Percent_Identity=27.4305555555556, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI33620759, Length=233, Percent_Identity=29.6137339055794, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI87081769, Length=215, Percent_Identity=39.5348837209302, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1786867, Length=127, Percent_Identity=30.7086614173228, Blast_Score=72, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17563256, Length=288, Percent_Identity=26.7361111111111, Blast_Score=99, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6319410, Length=292, Percent_Identity=26.027397260274, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21355295, Length=163, Percent_Identity=31.9018404907975, Blast_Score=85, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 34835; Mature: 34835

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSVIAINLCLIASIVTLFGNKIYMLYIGDCHQLWEEAQTHYVNRQYEKARELLEKIA
CCCCCEEEHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIDTAHHAQYLTGDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTK
HHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCH
DYSQAFKWLNKAATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHC
GYLYKNGLGVPQDFEEAFFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAEWLTKA
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHH
ALQGNAPAQYNLGRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSKEDT
HHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCC
EAPLLFT
CCCCCCC
>Mature Secondary Structure
MKKKSVIAINLCLIASIVTLFGNKIYMLYIGDCHQLWEEAQTHYVNRQYEKARELLEKIA
CCCCCEEEHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIDTAHHAQYLTGDMYLKGLGGEIDYDKALKLFHQSAAGGNTYAENNIGFMYTYGLGVTK
HHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCH
DYSQAFKWLNKAATQGNPEAQIGMGSLYKNGWGVRKDCYIAMTWYLRSVAHGNTDAMNNI
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHC
GYLYKNGLGVPQDFEEAFFWFKKAADKNNPIAQYNIGNMYCYGEGMEKDFAKGAEWLTKA
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHH
ALQGNAPAQYNLGRMYQWGKGVEKDLQQARFWFQKAIDNGHEKAKEALTKIKSDLSKEDT
HHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCC
EAPLLFT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]