| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yegS [C]
Identifier: 150005675
GI number: 150005675
Start: 3984636
End: 3985670
Strand: Reverse
Name: yegS [C]
Synonym: BVU_3165
Alternate gene names: 150005675
Gene position: 3985670-3984636 (Counterclockwise)
Preceding gene: 150005678
Following gene: 150005673
Centisome position: 77.19
GC content: 39.23
Gene sequence:
>1035_bases ATGACCACGAAAAAGAAAATTGTATTTGTCGTTAATCCTATCTCGGGGACACAGGGGAAAAGAGCCATATTAAAATGGAT TGACGAACGTATAAACCGTACACTTTATGATTATACGATTGTCAAAACACAATATGCCGGCCATGCTGAAAAGATTGCGG CTACAGCTGCCAAAGAGAAAGTAGATATAGTAGTGGCTATTGGAGGAGATGGAACTATAAACGAAATAGGACGTGCATTG ATACATACGGATACGGCATTAGGCATTATACCTTGCGGATCGGGAAACGGACTGGCACGGCATTTACAAATTCCTTTGGA ACCCAAGGCTGCTATTGACATTATAAACGAAAGTTCTGTTGCCTGTATTGATTACGGAAAAATAAACAATATACCCTTTT TCTGCACATGCGGAGTAGGTTTTGACGCGTTTGTCAGCTTAAAGTTTGCTGATTCAGGTAAACGCGGACTACTAACCTAT CTGGAAAATACCTTGCATGAAAGTCTGAGTTACAAACCTGAAACTTATGAAATAGAAAATGAAGAAGGAACGGTAAAATA CAAAGCTTTCCTGATAGCCTGCGGCAATGCCTCCCAATATGGGAACAACGCATATATTGCTCCACAGGCCTCGTTAACCG ATGGGTTGATGGATGTCACAATATTAGAGCCGTTCACAGTGCTGGATGTTCCTTCTTTATCTTTTCAACTTTTCAACAAA ACCATAGACCAAAACAGCCGGATCAAGACATTCCGTACTAAAAAGATTAAAATACATCGTTCAAAACCCGGAGTTATGCA TTATGACGGAGATCCGATCATGGGAGGAAAAGATATTGAGGTAGAATTGATTCCACACGGACTCAACATCATTGTTTCTG ATAAAAAAAAAGAGAACGAACCTTTTAGTCTCTTACAGCAAATATCCGAAATATTCAGTGGTATGAAACCTAAAGCTGAA ACTTTTGCTTTCCGGCACAGCCATTTATTTGAACTTAACAAAAGTTTATTGCGTCGTCTATCCAAAAAACAATAA
Upstream 100 bases:
>100_bases AAATATTTAGGGGCATCAAAACTTTTAGGATTTAGGGCAGTTATAAACAAAATGTATTACTTTTGCGTTTAATAAAGAGC TAAACTACCAAAGTAAAAGT
Downstream 100 bases:
>100_bases AAAATATCTTTTTTCTGAACATCAGTAAAGACTCTGCAAATAAAAACAGTTTCTTTATGATGTTCAGAATAATCCGCTCT CTACATGTTCAGATAGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTTKKKIVFVVNPISGTQGKRAILKWIDERINRTLYDYTIVKTQYAGHAEKIAATAAKEKVDIVVAIGGDGTINEIGRAL IHTDTALGIIPCGSGNGLARHLQIPLEPKAAIDIINESSVACIDYGKINNIPFFCTCGVGFDAFVSLKFADSGKRGLLTY LENTLHESLSYKPETYEIENEEGTVKYKAFLIACGNASQYGNNAYIAPQASLTDGLMDVTILEPFTVLDVPSLSFQLFNK TIDQNSRIKTFRTKKIKIHRSKPGVMHYDGDPIMGGKDIEVELIPHGLNIIVSDKKKENEPFSLLQQISEIFSGMKPKAE TFAFRHSHLFELNKSLLRRLSKKQ
Sequences:
>Translated_344_residues MTTKKKIVFVVNPISGTQGKRAILKWIDERINRTLYDYTIVKTQYAGHAEKIAATAAKEKVDIVVAIGGDGTINEIGRAL IHTDTALGIIPCGSGNGLARHLQIPLEPKAAIDIINESSVACIDYGKINNIPFFCTCGVGFDAFVSLKFADSGKRGLLTY LENTLHESLSYKPETYEIENEEGTVKYKAFLIACGNASQYGNNAYIAPQASLTDGLMDVTILEPFTVLDVPSLSFQLFNK TIDQNSRIKTFRTKKIKIHRSKPGVMHYDGDPIMGGKDIEVELIPHGLNIIVSDKKKENEPFSLLQQISEIFSGMKPKAE TFAFRHSHLFELNKSLLRRLSKKQ >Mature_343_residues TTKKKIVFVVNPISGTQGKRAILKWIDERINRTLYDYTIVKTQYAGHAEKIAATAAKEKVDIVVAIGGDGTINEIGRALI HTDTALGIIPCGSGNGLARHLQIPLEPKAAIDIINESSVACIDYGKINNIPFFCTCGVGFDAFVSLKFADSGKRGLLTYL ENTLHESLSYKPETYEIENEEGTVKYKAFLIACGNASQYGNNAYIAPQASLTDGLMDVTILEPFTVLDVPSLSFQLFNKT IDQNSRIKTFRTKKIKIHRSKPGVMHYDGDPIMGGKDIEVELIPHGLNIIVSDKKKENEPFSLLQQISEIFSGMKPKAET FAFRHSHLFELNKSLLRRLSKKQ
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=253, Percent_Identity=28.0632411067194, Blast_Score=85, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001206 - InterPro: IPR004363 - InterPro: IPR018148 - InterPro: IPR011607 [H]
Pfam domain/function: PF00781 DAGK_cat; PF02142 MGS [H]
EC number: NA
Molecular weight: Translated: 38139; Mature: 38008
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKKKIVFVVNPISGTQGKRAILKWIDERINRTLYDYTIVKTQYAGHAEKIAATAAKEK CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCHHHHHHHHCCCC VDIVVAIGGDGTINEIGRALIHTDTALGIIPCGSGNGLARHLQIPLEPKAAIDIINESSV EEEEEEECCCCCHHHHHHHHEECCCCEEEEECCCCCCCEEEEECCCCCCHHEEEECCCCE ACIDYGKINNIPFFCTCGVGFDAFVSLKFADSGKRGLLTYLENTLHESLSYKPETYEIEN EEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEC EEGTVKYKAFLIACGNASQYGNNAYIAPQASLTDGLMDVTILEPFTVLDVPSLSFQLFNK CCCEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCEEEEEECCEEEEECCCCHHHHHHH TIDQNSRIKTFRTKKIKIHRSKPGVMHYDGDPIMGGKDIEVELIPHGLNIIVSDKKKENE HHCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCC PFSLLQQISEIFSGMKPKAETFAFRHSHLFELNKSLLRRLSKKQ HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTKKKIVFVVNPISGTQGKRAILKWIDERINRTLYDYTIVKTQYAGHAEKIAATAAKEK CCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCHHHHHHHHCCCC VDIVVAIGGDGTINEIGRALIHTDTALGIIPCGSGNGLARHLQIPLEPKAAIDIINESSV EEEEEEECCCCCHHHHHHHHEECCCCEEEEECCCCCCCEEEEECCCCCCHHEEEECCCCE ACIDYGKINNIPFFCTCGVGFDAFVSLKFADSGKRGLLTYLENTLHESLSYKPETYEIEN EEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEC EEGTVKYKAFLIACGNASQYGNNAYIAPQASLTDGLMDVTILEPFTVLDVPSLSFQLFNK CCCEEEEEEEEEECCCCCCCCCCEEECCCCCCCCCCEEEEEECCEEEEECCCCHHHHHHH TIDQNSRIKTFRTKKIKIHRSKPGVMHYDGDPIMGGKDIEVELIPHGLNIIVSDKKKENE HHCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCC PFSLLQQISEIFSGMKPKAETFAFRHSHLFELNKSLLRRLSKKQ HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]