| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005521
Identifier: 150005521
GI number: 150005521
Start: 3803388
End: 3804539
Strand: Direct
Name: 150005521
Synonym: BVU_3005
Alternate gene names: NA
Gene position: 3803388-3804539 (Clockwise)
Preceding gene: 150005520
Following gene: 150005525
Centisome position: 73.66
GC content: 45.14
Gene sequence:
>1152_bases ATGGGAAGAATGACTTATGTTAAAGCATTGATGTGCCTGTTATTTCCCTCTGCTGCTTTAGTTGCCCGCGCGCAACACCC GGTTGCCGGGGATTTGAAGTGTAAACTGACCGGACGGATGCTTATGGATGGTGGCGTTTATTTAAAGAATGACAACCTGT TTGGTAACGGTACGGAGTTTAATGACTTGCGGTTGGGGGTGAAAGCGACCTATCAGAATTGGAGCATGAAAATGGAGGTG GGGTATGTAGGGAATAAGGTTTCCATAAAGGATGCCTTTGCTGCTTATACTTCGGGCAAGCATATTATTCAGGTGGGACA ATTTTATGAACCTTTCACCTTGGACATGCTATGCAGTACGTACGATCTTCGTTTTCACCAGTCACCGGGAATCGTGCTGG CTTTGACCAATGGCAGACGGATGGGAACCTCTTATACCTACAATGGAAAACATTATTATGCTTCCGGAGGCTTCTTTACA GACAGTGACCTGGGTAATGTGAAAAACATTTCACAAGGATATGCCATAGACGGTCGTTTGGTGTATCGTCCTGTAAACGA AGAGGGAAAATTGTTACACATAGGTGCGGCGGTGGTGTATCGTACTCCGGATAGCGCATTGCCGGGAGATGAAGACGAGA ATACGTTTATTTATAAATCTCCGGGGGTGAGCACTATTGATAACCGGAATCTTATTTACGCCAAGGTAGATCATGCAAAG TACCAGTTGAAACAAGGGGTGGAATTAATGATCGCTCATCAGAGGTTCTTTTTGCAAGGGGAGTATATACGGACTATGGT GAAGCGTGAACAGAATTTCACAAATTATACAGGACATGGCGGATATGTGCAATGCTCCTGGTTGTTGACAGGCAGGCAAT ATGGGTATGATGAAGCATTGGCTTGTCCGGGCAGACCTGTGGGGCGGGCATTGGAGCTGTGTGGAAGATTTAATATCCTT GATATGAATAATGAGGAAGCCGGTGTGTGGGGAGGGGCTCAAAAGGATTTTTCATTGGGCGTGAATTATTACATGAATAA GCATATAGGGATGAAGCTGGCTTATAGCTGGGTGATGCCGGGAAAGCATATAAAGGAGATTAGTGATAAGAATTTCAGTG TCGTGCAGCTCCGGTTCCAAATGATCTTGTAA
Upstream 100 bases:
>100_bases TTCTGCGCGTAATAACTTCATCATCAAATTAATGGTTATTCATTTTTAGTATAGGTCATTCCTCTTACATTTGTTATAAA GTAAAAAACAAAAGAATACA
Downstream 100 bases:
>100_bases CGGAAGAAGGGTAGAAACAAATTCGGGCGCAATCACTGCGCCCGAGCCATAAAGCTAGATTTATTTTTTATTTTGCGACG GTCTTGATAGCTTCAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MGRMTYVKALMCLLFPSAALVARAQHPVAGDLKCKLTGRMLMDGGVYLKNDNLFGNGTEFNDLRLGVKATYQNWSMKMEV GYVGNKVSIKDAFAAYTSGKHIIQVGQFYEPFTLDMLCSTYDLRFHQSPGIVLALTNGRRMGTSYTYNGKHYYASGGFFT DSDLGNVKNISQGYAIDGRLVYRPVNEEGKLLHIGAAVVYRTPDSALPGDEDENTFIYKSPGVSTIDNRNLIYAKVDHAK YQLKQGVELMIAHQRFFLQGEYIRTMVKREQNFTNYTGHGGYVQCSWLLTGRQYGYDEALACPGRPVGRALELCGRFNIL DMNNEEAGVWGGAQKDFSLGVNYYMNKHIGMKLAYSWVMPGKHIKEISDKNFSVVQLRFQMIL
Sequences:
>Translated_383_residues MGRMTYVKALMCLLFPSAALVARAQHPVAGDLKCKLTGRMLMDGGVYLKNDNLFGNGTEFNDLRLGVKATYQNWSMKMEV GYVGNKVSIKDAFAAYTSGKHIIQVGQFYEPFTLDMLCSTYDLRFHQSPGIVLALTNGRRMGTSYTYNGKHYYASGGFFT DSDLGNVKNISQGYAIDGRLVYRPVNEEGKLLHIGAAVVYRTPDSALPGDEDENTFIYKSPGVSTIDNRNLIYAKVDHAK YQLKQGVELMIAHQRFFLQGEYIRTMVKREQNFTNYTGHGGYVQCSWLLTGRQYGYDEALACPGRPVGRALELCGRFNIL DMNNEEAGVWGGAQKDFSLGVNYYMNKHIGMKLAYSWVMPGKHIKEISDKNFSVVQLRFQMIL >Mature_382_residues GRMTYVKALMCLLFPSAALVARAQHPVAGDLKCKLTGRMLMDGGVYLKNDNLFGNGTEFNDLRLGVKATYQNWSMKMEVG YVGNKVSIKDAFAAYTSGKHIIQVGQFYEPFTLDMLCSTYDLRFHQSPGIVLALTNGRRMGTSYTYNGKHYYASGGFFTD SDLGNVKNISQGYAIDGRLVYRPVNEEGKLLHIGAAVVYRTPDSALPGDEDENTFIYKSPGVSTIDNRNLIYAKVDHAKY QLKQGVELMIAHQRFFLQGEYIRTMVKREQNFTNYTGHGGYVQCSWLLTGRQYGYDEALACPGRPVGRALELCGRFNILD MNNEEAGVWGGAQKDFSLGVNYYMNKHIGMKLAYSWVMPGKHIKEISDKNFSVVQLRFQMIL
Specific function: Unknown
COG id: COG3746
COG function: function code P; Phosphate-selective porin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010870 [H]
Pfam domain/function: PF07396 Porin_O_P [H]
EC number: NA
Molecular weight: Translated: 43067; Mature: 42936
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRMTYVKALMCLLFPSAALVARAQHPVAGDLKCKLTGRMLMDGGVYLKNDNLFGNGTEF CCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECEEEECCCEEEECCCCCCCCCCC NDLRLGVKATYQNWSMKMEVGYVGNKVSIKDAFAAYTSGKHIIQVGQFYEPFTLDMLCST CEEEEEEEEEECCCEEEEEEEECCCEEEEHHHHHHHCCCCEEEEECCCCCCEEHEEHHCE YDLRFHQSPGIVLALTNGRRMGTSYTYNGKHYYASGGFFTDSDLGNVKNISQGYAIDGRL EEEEEECCCCEEEEEECCCEECCEEEECCEEEEECCCEECCCCCCCCCCCCCCEEECCEE VYRPVNEEGKLLHIGAAVVYRTPDSALPGDEDENTFIYKSPGVSTIDNRNLIYAKVDHAK EEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCEECCCEEEEEEECCHH YQLKQGVELMIAHQRFFLQGEYIRTMVKREQNFTNYTGHGGYVQCSWLLTGRQYGYDEAL HHHHCCCEEEEEEHHHEECCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCC ACPGRPVGRALELCGRFNILDMNNEEAGVWGGAQKDFSLGVNYYMNKHIGMKLAYSWVMP CCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCC GKHIKEISDKNFSVVQLRFQMIL CHHHHHHCCCCCEEEEEEEEECC >Mature Secondary Structure GRMTYVKALMCLLFPSAALVARAQHPVAGDLKCKLTGRMLMDGGVYLKNDNLFGNGTEF CCHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEEECEEEECCCEEEECCCCCCCCCCC NDLRLGVKATYQNWSMKMEVGYVGNKVSIKDAFAAYTSGKHIIQVGQFYEPFTLDMLCST CEEEEEEEEEECCCEEEEEEEECCCEEEEHHHHHHHCCCCEEEEECCCCCCEEHEEHHCE YDLRFHQSPGIVLALTNGRRMGTSYTYNGKHYYASGGFFTDSDLGNVKNISQGYAIDGRL EEEEEECCCCEEEEEECCCEECCEEEECCEEEEECCCEECCCCCCCCCCCCCCEEECCEE VYRPVNEEGKLLHIGAAVVYRTPDSALPGDEDENTFIYKSPGVSTIDNRNLIYAKVDHAK EEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCEECCCEEEEEEECCHH YQLKQGVELMIAHQRFFLQGEYIRTMVKREQNFTNYTGHGGYVQCSWLLTGRQYGYDEAL HHHHCCCEEEEEEHHHEECCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCC ACPGRPVGRALELCGRFNILDMNNEEAGVWGGAQKDFSLGVNYYMNKHIGMKLAYSWVMP CCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCC GKHIKEISDKNFSVVQLRFQMIL CHHHHHHCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11259647; 1938923 [H]