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The map label for this gene is atpA

Identifier: 150005516

GI number: 150005516

Start: 3796800

End: 3798392

Strand: Direct

Name: atpA

Synonym: BVU_3000

Alternate gene names: 150005516

Gene position: 3796800-3798392 (Clockwise)

Preceding gene: 150005515

Following gene: 150005517

Centisome position: 73.54

GC content: 48.71

Gene sequence:

>1593_bases
ATGTCTGAAAATATAAAACCCAGCGAAGTATCCGAAGTTTTACTTCAGCAGCTGAAAGGCATCGACACCCACCTGCAATT
TGACGAGGTGGGGAATGTGCTGCAAGTGAGCGATGGCGTAGCACGTATTTACGGTCTGCGCAACGCGGAAGCCAATGAGT
TGCTGGAGTTTGAAAACGGTATCATGGCTATCGTGATGAACCTGGAGGAGGACAATGTAGGTGCGGTATTGCTAGGTCCT
ACTGATCAGATTAAGGAAGGAATGGTGGTGAAACGTACCAAACGCATTGCTTCTATTAATGTGGGCGAAGGTATGTTAGG
GCGTGTCATCGATCCGTTAGGCGTACCATTGGATGGCCGCGGACAGATTGGCGGGGAACTGTGCGAAATGCCTTTGGAGC
GTAAAGCTCCCGGAGTGATCTTCCGTCAGCCTGTGAACCAGCCTTTGCAGACAGGGCTGAAGTCTGTGGATGCCATGATT
CCTATCGGGCGTGGACAACGTGAGTTGATTATCGGGGACCGTCAGACCGGAAAAACCTCTATCGCTATAGATACGATTTT
GAATCAGAAATCCAACTATGAAGCGGGAAAACCTGTATATTGCATTTATGTAGCTATTGGTCAGAAGGGTTCCACTGTAG
CCAGTCTGGTGAATACGCTGCGTGAACGCGGTGCGATGGATTATACCATAGTGGTAGCTGCCACTGCTGCCGATCCGGCT
GCATTGCAGTATTTTGCTCCGTTTGCCGGAGCGGCTATCGGAGAGTATTTCCGTGACACCGGCCGGGATGCCTTGGTAGT
GTATGATGACTTGTCAAAGCAAGCCGTAGCCTATCGTGAAGTATCCTTGATTCTGCGTCGTCCCTCCGGTCGTGAGGCAT
ATCCGGGTGATATCTTCTATCTGCATTCACGATTGTTGGAACGTGCGGCGAAGATTATCAACCAGCAGGAAGTGGCCGAA
CAGATGAATGACCTTCCACCCAGTTTGAAAGGCAAGGTAAAGGCAGGTGGTTCACTGACTGCATTGCCTATTATCGAAAC
ACAGGCAGGTGATGTTTCCGCGTATATTCCAACCAATGTCATTTCCATTACAGACGGTCAGATATTCCTTGAAACCGATT
TGTTCAACCAGGGTTTCCGTCCGGCTATCAATGTGGGTATTTCCGTATCCCGTGTGGGAGGTAGTGCCCAGATCAAGAGC
ATGAAGAAGGTGGCAGGTACATTGAAGATCGATCAGGCACAATATCGCGAACTGGAGGCTTTCTCCAAGTTCAGCAGTGA
TATGGATCCTGTAACGGCAATGGCTATCGACCGGGGACGTAAGAACAACCAGTTGCTGATACAGCCGCAGTACAGTCCGA
TGCCTGTCGGAGAACAAATAGCCATCCTTTATTGTGGTACACATAGTTTGCTGCGTGATGTACCCTTGCATAAGGTGCAG
GATTTCCAGAAATCATTCCTGGAAATGATGCGTGCCGACCATCAGAAAGATGTGCTTGATGTATTGTCAAGCGGTGTGAT
AAATGATGATGTAACTGCAATTATAGAGAAAGTAGCAGCTGATACGGCTCAACCATTTAAAGTGAACGAATAG

Upstream 100 bases:

>100_bases
AAGTAAAAGTATATCAGTTTGTATCTTTTGGTTTTTAATTTAAGGTTAATACCTGGTCGGGCTTTAATTTTTAATTTTCA
ATTTTTAATGTAAAAAGATT

Downstream 100 bases:

>100_bases
TCATGGCATCACTGAAAGAAGTAAAAGGAAGAATAGCCTCAGTAAATAATACGCGGAAAATTACTTCGGCTATGAAGATG
GTAGCCTCTGCCAAGTTGCA

Product: F0F1 ATP synthase subunit alpha

Products: NA

Alternate protein names: ATP synthase F1 sector subunit alpha; F-ATPase subunit alpha

Number of amino acids: Translated: 530; Mature: 529

Protein sequence:

>530_residues
MSENIKPSEVSEVLLQQLKGIDTHLQFDEVGNVLQVSDGVARIYGLRNAEANELLEFENGIMAIVMNLEEDNVGAVLLGP
TDQIKEGMVVKRTKRIASINVGEGMLGRVIDPLGVPLDGRGQIGGELCEMPLERKAPGVIFRQPVNQPLQTGLKSVDAMI
PIGRGQRELIIGDRQTGKTSIAIDTILNQKSNYEAGKPVYCIYVAIGQKGSTVASLVNTLRERGAMDYTIVVAATAADPA
ALQYFAPFAGAAIGEYFRDTGRDALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLERAAKIINQQEVAE
QMNDLPPSLKGKVKAGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNQGFRPAINVGISVSRVGGSAQIKS
MKKVAGTLKIDQAQYRELEAFSKFSSDMDPVTAMAIDRGRKNNQLLIQPQYSPMPVGEQIAILYCGTHSLLRDVPLHKVQ
DFQKSFLEMMRADHQKDVLDVLSSGVINDDVTAIIEKVAADTAQPFKVNE

Sequences:

>Translated_530_residues
MSENIKPSEVSEVLLQQLKGIDTHLQFDEVGNVLQVSDGVARIYGLRNAEANELLEFENGIMAIVMNLEEDNVGAVLLGP
TDQIKEGMVVKRTKRIASINVGEGMLGRVIDPLGVPLDGRGQIGGELCEMPLERKAPGVIFRQPVNQPLQTGLKSVDAMI
PIGRGQRELIIGDRQTGKTSIAIDTILNQKSNYEAGKPVYCIYVAIGQKGSTVASLVNTLRERGAMDYTIVVAATAADPA
ALQYFAPFAGAAIGEYFRDTGRDALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLERAAKIINQQEVAE
QMNDLPPSLKGKVKAGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNQGFRPAINVGISVSRVGGSAQIKS
MKKVAGTLKIDQAQYRELEAFSKFSSDMDPVTAMAIDRGRKNNQLLIQPQYSPMPVGEQIAILYCGTHSLLRDVPLHKVQ
DFQKSFLEMMRADHQKDVLDVLSSGVINDDVTAIIEKVAADTAQPFKVNE
>Mature_529_residues
SENIKPSEVSEVLLQQLKGIDTHLQFDEVGNVLQVSDGVARIYGLRNAEANELLEFENGIMAIVMNLEEDNVGAVLLGPT
DQIKEGMVVKRTKRIASINVGEGMLGRVIDPLGVPLDGRGQIGGELCEMPLERKAPGVIFRQPVNQPLQTGLKSVDAMIP
IGRGQRELIIGDRQTGKTSIAIDTILNQKSNYEAGKPVYCIYVAIGQKGSTVASLVNTLRERGAMDYTIVVAATAADPAA
LQYFAPFAGAAIGEYFRDTGRDALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLERAAKIINQQEVAEQ
MNDLPPSLKGKVKAGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNQGFRPAINVGISVSRVGGSAQIKSM
KKVAGTLKIDQAQYRELEAFSKFSSDMDPVTAMAIDRGRKNNQLLIQPQYSPMPVGEQIAILYCGTHSLLRDVPLHKVQD
FQKSFLEMMRADHQKDVLDVLSSGVINDDVTAIIEKVAADTAQPFKVNE

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit

COG id: COG0056

COG function: function code C; F0F1-type ATP synthase, alpha subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family

Homologues:

Organism=Homo sapiens, GI50345984, Length=523, Percent_Identity=54.4933078393882, Blast_Score=563, Evalue=1e-160,
Organism=Homo sapiens, GI4757810, Length=523, Percent_Identity=54.4933078393882, Blast_Score=563, Evalue=1e-160,
Organism=Homo sapiens, GI19913428, Length=333, Percent_Identity=27.3273273273273, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI19913426, Length=328, Percent_Identity=27.1341463414634, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI32189394, Length=437, Percent_Identity=23.5697940503432, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI19913424, Length=272, Percent_Identity=27.2058823529412, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1790172, Length=508, Percent_Identity=54.1338582677165, Blast_Score=535, Evalue=1e-153,
Organism=Escherichia coli, GI1790170, Length=437, Percent_Identity=24.0274599542334, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1788251, Length=349, Percent_Identity=24.9283667621776, Blast_Score=93, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI71988063, Length=523, Percent_Identity=54.4933078393882, Blast_Score=563, Evalue=1e-160,
Organism=Caenorhabditis elegans, GI71988080, Length=523, Percent_Identity=54.4933078393882, Blast_Score=561, Evalue=1e-160,
Organism=Caenorhabditis elegans, GI71988074, Length=523, Percent_Identity=51.2428298279159, Blast_Score=514, Evalue=1e-146,
Organism=Caenorhabditis elegans, GI17510931, Length=458, Percent_Identity=24.0174672489083, Blast_Score=92, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17570191, Length=335, Percent_Identity=25.6716417910448, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71988068, Length=72, Percent_Identity=47.2222222222222, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17509265, Length=50, Percent_Identity=62, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17565854, Length=292, Percent_Identity=27.3972602739726, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI25144756, Length=412, Percent_Identity=23.7864077669903, Blast_Score=72, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6319370, Length=528, Percent_Identity=52.0833333333333, Blast_Score=559, Evalue=1e-160,
Organism=Saccharomyces cerevisiae, GI6319603, Length=318, Percent_Identity=28.3018867924528, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6322581, Length=399, Percent_Identity=24.0601503759398, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24658560, Length=525, Percent_Identity=52.5714285714286, Blast_Score=555, Evalue=1e-158,
Organism=Drosophila melanogaster, GI281361666, Length=333, Percent_Identity=26.1261261261261, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24646341, Length=333, Percent_Identity=26.1261261261261, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17136796, Length=333, Percent_Identity=26.1261261261261, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24638766, Length=446, Percent_Identity=24.8878923766816, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574560, Length=442, Percent_Identity=22.8506787330317, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24583988, Length=276, Percent_Identity=27.1739130434783, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24583986, Length=276, Percent_Identity=27.1739130434783, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24583984, Length=276, Percent_Identity=27.1739130434783, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24583992, Length=276, Percent_Identity=27.1739130434783, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI20129479, Length=276, Percent_Identity=27.1739130434783, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: 9,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): ATPA_BACV8 (A6L4M4)

Other databases:

- EMBL:   CP000139
- RefSeq:   YP_001300260.1
- ProteinModelPortal:   A6L4M4
- STRING:   A6L4M4
- GeneID:   5303961
- GenomeReviews:   CP000139_GR
- KEGG:   bvu:BVU_3000
- NMPDR:   fig|435590.6.peg.2809
- eggNOG:   COG0056
- HOGENOM:   HBG565875
- OMA:   EMALTLW
- ProtClustDB:   PRK09281
- HAMAP:   MF_01346
- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR005294
- InterPro:   IPR017458
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100
- PANTHER:   PTHR15184:SF3
- TIGRFAMs:   TIGR00962

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N; SSF47917 ATPase_a/b_C; SSF50615 ATPase_a/b_N

EC number: =3.6.3.14

Molecular weight: Translated: 57715; Mature: 57584

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENIKPSEVSEVLLQQLKGIDTHLQFDEVGNVLQVSDGVARIYGLRNAEANELLEFENG
CCCCCCHHHHHHHHHHHHCCCCCEEEHHHHCCEEEECCCHHHHHCCCCCCHHHHHHHCCC
IMAIVMNLEEDNVGAVLLGPTDQIKEGMVVKRTKRIASINVGEGMLGRVIDPLGVPLDGR
EEEEEEEECCCCCCEEEECCHHHHHCCHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCC
GQIGGELCEMPLERKAPGVIFRQPVNQPLQTGLKSVDAMIPIGRGQRELIIGDRQTGKTS
CCCCHHHHHCCHHHCCCCEEEECCCCHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCE
IAIDTILNQKSNYEAGKPVYCIYVAIGQKGSTVASLVNTLRERGAMDYTIVVAATAADPA
EEHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHH
ALQYFAPFAGAAIGEYFRDTGRDALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFY
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEECCCCCCCCCCHHHH
LHSRLLERAAKIINQQEVAEQMNDLPPSLKGKVKAGGSLTALPIIETQAGDVSAYIPTNV
HHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEECCCCEEEEEEEECCCCCEEEECCCCE
ISITDGQIFLETDLFNQGFRPAINVGISVSRVGGSAQIKSMKKVAGTLKIDQAQYRELEA
EEEECCEEEEEECCCCCCCCCHHCCCEEEEECCCHHHHHHHHHHHHHEEECHHHHHHHHH
FSKFSSDMDPVTAMAIDRGRKNNQLLIQPQYSPMPVGEQIAILYCGTHSLLRDVPLHKVQ
HHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHCCCHHHHH
DFQKSFLEMMRADHQKDVLDVLSSGVINDDVTAIIEKVAADTAQPFKVNE
HHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SENIKPSEVSEVLLQQLKGIDTHLQFDEVGNVLQVSDGVARIYGLRNAEANELLEFENG
CCCCCHHHHHHHHHHHHCCCCCEEEHHHHCCEEEECCCHHHHHCCCCCCHHHHHHHCCC
IMAIVMNLEEDNVGAVLLGPTDQIKEGMVVKRTKRIASINVGEGMLGRVIDPLGVPLDGR
EEEEEEEECCCCCCEEEECCHHHHHCCHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCCC
GQIGGELCEMPLERKAPGVIFRQPVNQPLQTGLKSVDAMIPIGRGQRELIIGDRQTGKTS
CCCCHHHHHCCHHHCCCCEEEECCCCHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCE
IAIDTILNQKSNYEAGKPVYCIYVAIGQKGSTVASLVNTLRERGAMDYTIVVAATAADPA
EEHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHH
ALQYFAPFAGAAIGEYFRDTGRDALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFY
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEECCCCCCCCCCHHHH
LHSRLLERAAKIINQQEVAEQMNDLPPSLKGKVKAGGSLTALPIIETQAGDVSAYIPTNV
HHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEECCCCEEEEEEEECCCCCEEEECCCCE
ISITDGQIFLETDLFNQGFRPAINVGISVSRVGGSAQIKSMKKVAGTLKIDQAQYRELEA
EEEECCEEEEEECCCCCCCCCHHCCCEEEEECCCHHHHHHHHHHHHHEEECHHHHHHHHH
FSKFSSDMDPVTAMAIDRGRKNNQLLIQPQYSPMPVGEQIAILYCGTHSLLRDVPLHKVQ
HHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHCCCHHHHH
DFQKSFLEMMRADHQKDVLDVLSSGVINDDVTAIIEKVAADTAQPFKVNE
HHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA