| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is aroB [H]
Identifier: 150005507
GI number: 150005507
Start: 3789204
End: 3790118
Strand: Direct
Name: aroB [H]
Synonym: BVU_2991
Alternate gene names: 150005507
Gene position: 3789204-3790118 (Clockwise)
Preceding gene: 150005506
Following gene: 150005508
Centisome position: 73.39
GC content: 42.84
Gene sequence:
>915_bases ATGGGAAAAGTGAATTATGCTGCTATTGATATTGGTTCTAACGCTGTGCGCCTTTTGATAAAAAGCATTGACAGGGAGGC TGTGCAGGAGAAAAAAATTAAAAAAGTGATGATGCTTCGCGTACCCCTACGACTAGGGTTCGATGTTTTCTCCATAGGTG AATTGTCCGAGAAGAAAGCGGATAAGCTGAGACGTTTGATGAAGGCTTTCCGTCAGTTGATGAAAATTTATGATGTGGAT GATTACAGGGCATGTGCTACTTCGGCTATGCGGGACGCGCGTAACGGGAGGACGATAATCAAGAAAATCGAAAAGGATAC AGGTATCCGCATTGAGATAATTGATGGTCAGGAAGAGGCTCGAATGATTTATAATAATCATATAGAGTGTATGGAAGACC GTCTGGGTAATTATATGTATGTGGATGTGGGTGGTGGCAGTACAGAGATTAATCTGTTGACTAACGGTGAGTTGGTATGG TCGGTGTCTTACAACATCGGTACGGTGCGTATGCTAAGTAATGCTGTTAAAGAAGGAACTTGGCAGCAAATGGAAGAAGA GCTTATGAAAGTGACGGAAGGTGTTGCCGCGATCAATATCATCGGATCGGGTGGGAATATTAATAAGTTGTTCCGCCTGG CAGATAAGAAGGATAAGAAGTTGCAACGTTTGCCGGTCAGTTCGTTGCAAACAGTCTATGATGTGTTGAAACCGCTGACT CCGGAGGAAAGGGTAGAGGCATTCAGTCTAAAGCAAGACCGTGCCGATGTAATTGTGCCTGCTGCGGAAATTTTTCTGAA AATTGCAGAAGTAGTGCATGCAGAATATATTTATGTTCCGGTCATTGGACTGTCTGATGGTATCATTGACAATCTGTATG CCAAAAGCCTTGAGAAAGAAATGAAAGTTGAATAA
Upstream 100 bases:
>100_bases GGAGAGAATCGTCCTTGGATATCGGAAGATAAGACAGCTTTCCGTTCGCAGGAGGAATTATACAAATATTATTTAAATGA AAACAGAATAAAGGATTAAG
Downstream 100 bases:
>100_bases ACTTTCATTTTAATACTGTTTGTATTGTACGACTTCAAAAATATTCGGTTTATCCTGATAAATTGTTGGAAATTAATAGT TGAAGTTCCAAAATTTGCTA
Product: putative phosphatase
Products: NA
Alternate protein names: 3-dehydroquinate synthase; Unknown phosphatase [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MGKVNYAAIDIGSNAVRLLIKSIDREAVQEKKIKKVMMLRVPLRLGFDVFSIGELSEKKADKLRRLMKAFRQLMKIYDVD DYRACATSAMRDARNGRTIIKKIEKDTGIRIEIIDGQEEARMIYNNHIECMEDRLGNYMYVDVGGGSTEINLLTNGELVW SVSYNIGTVRMLSNAVKEGTWQQMEEELMKVTEGVAAINIIGSGGNINKLFRLADKKDKKLQRLPVSSLQTVYDVLKPLT PEERVEAFSLKQDRADVIVPAAEIFLKIAEVVHAEYIYVPVIGLSDGIIDNLYAKSLEKEMKVE
Sequences:
>Translated_304_residues MGKVNYAAIDIGSNAVRLLIKSIDREAVQEKKIKKVMMLRVPLRLGFDVFSIGELSEKKADKLRRLMKAFRQLMKIYDVD DYRACATSAMRDARNGRTIIKKIEKDTGIRIEIIDGQEEARMIYNNHIECMEDRLGNYMYVDVGGGSTEINLLTNGELVW SVSYNIGTVRMLSNAVKEGTWQQMEEELMKVTEGVAAINIIGSGGNINKLFRLADKKDKKLQRLPVSSLQTVYDVLKPLT PEERVEAFSLKQDRADVIVPAAEIFLKIAEVVHAEYIYVPVIGLSDGIIDNLYAKSLEKEMKVE >Mature_303_residues GKVNYAAIDIGSNAVRLLIKSIDREAVQEKKIKKVMMLRVPLRLGFDVFSIGELSEKKADKLRRLMKAFRQLMKIYDVDD YRACATSAMRDARNGRTIIKKIEKDTGIRIEIIDGQEEARMIYNNHIECMEDRLGNYMYVDVGGGSTEINLLTNGELVWS VSYNIGTVRMLSNAVKEGTWQQMEEELMKVTEGVAAINIIGSGGNINKLFRLADKKDKKLQRLPVSSLQTVYDVLKPLTP EERVEAFSLKQDRADVIVPAAEIFLKIAEVVHAEYIYVPVIGLSDGIIDNLYAKSLEKEMKVE
Specific function: Conversion Of Pppgpp To Ppgpp. Guanosine Pentaphosphate (Pppgpp) Is A Cytoplasmic Signaling Molecule Which Together With Ppgpp Controls The "Stringent Response", An Adaptive Process That Allows Bacteria To Respond To Amino Acid Starvation, Resulting In T
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI48994966, Length=176, Percent_Identity=28.9772727272727, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788848, Length=164, Percent_Identity=29.8780487804878, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002658 - InterPro: IPR016037 - InterPro: IPR003695 [H]
Pfam domain/function: PF01761 DHQ_synthase; PF02541 Ppx-GppA [H]
EC number: =4.2.3.4 [H]
Molecular weight: Translated: 34369; Mature: 34237
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVNYAAIDIGSNAVRLLIKSIDREAVQEKKIKKVMMLRVPLRLGFDVFSIGELSEKKA CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHH DKLRRLMKAFRQLMKIYDVDDYRACATSAMRDARNGRTIIKKIEKDTGIRIEIIDGQEEA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCHHH RMIYNNHIECMEDRLGNYMYVDVGGGSTEINLLTNGELVWSVSYNIGTVRMLSNAVKEGT HHHHHCCHHHHHHHCCCEEEEEECCCCEEEEEEECCEEEEEEECCCHHHHHHHHHHHCCH WQQMEEELMKVTEGVAAINIIGSGGNINKLFRLADKKDKKLQRLPVSSLQTVYDVLKPLT HHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCC PEERVEAFSLKQDRADVIVPAAEIFLKIAEVVHAEYIYVPVIGLSDGIIDNLYAKSLEKE CHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHHHHH MKVE HCCC >Mature Secondary Structure GKVNYAAIDIGSNAVRLLIKSIDREAVQEKKIKKVMMLRVPLRLGFDVFSIGELSEKKA CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHH DKLRRLMKAFRQLMKIYDVDDYRACATSAMRDARNGRTIIKKIEKDTGIRIEIIDGQEEA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCHHH RMIYNNHIECMEDRLGNYMYVDVGGGSTEINLLTNGELVWSVSYNIGTVRMLSNAVKEGT HHHHHCCHHHHHHHCCCEEEEEECCCCEEEEEEECCEEEEEEECCCHHHHHHHHHHHCCH WQQMEEELMKVTEGVAAINIIGSGGNINKLFRLADKKDKKLQRLPVSSLQTVYDVLKPLT HHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCC PEERVEAFSLKQDRADVIVPAAEIFLKIAEVVHAEYIYVPVIGLSDGIIDNLYAKSLEKE CHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHHHHH MKVE HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11889109 [H]