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The map label for this gene is gne [H]

Identifier: 150005472

GI number: 150005472

Start: 3752489

End: 3753502

Strand: Direct

Name: gne [H]

Synonym: BVU_2955

Alternate gene names: 150005472

Gene position: 3752489-3753502 (Clockwise)

Preceding gene: 150005471

Following gene: 150005473

Centisome position: 72.68

GC content: 49.8

Gene sequence:

>1014_bases
ATGAATTACTTTATTACAGGTGGTACCGGTTTCATTGGCACCCACCTCGCCAGTCTTTTGCACGAAGTGCATCCCGAAAC
AAGAATTTACAACTTGGATATTGTAGAGCCGGGTACTCCATTACCGACAGTAAAAAATTATAAACCGGCTTTAGGAAACG
GGGAGGAACATGCAGCCACATTCATCTATTGTGATGTACGCCAGCCGATAGAGTTGGAAAAAGTAAATATCACTCCCGAT
GATGTGATCTTTAACTTCGCCGCCGTTCATCGCACTCCCGGTCATCCCGATCCTGCATATTTTGAAACAAATATCCGTGG
TGCGGAGAACGTCTGTGCCTTTGCCGAACGGCATGGCATCCGGAAAATAGTTTTCACCAGTTCCATAGCCCCTTACGGTG
CTGCCGAGGAACTGAAGGAGGAAACCACGCTGCCTATGCCCAACACCCCATACGGCATATCCAAGCTGGTTGCGGAAAAG
ATTCATCAGACCTGGCAGGCAGGAGGTGAAGGCCGCCAGCTTACCATTGTCCGTCCCGGTGTGGTGTTCGGACGGGGAGA
GAACGGAAACTTTACGCGTCTGTATTGGGGCATTCGGGGGCATAAATTTATGTACCCGGGACGCAAGGATACCATCAAGG
CCTGTATCTATGTGAAGGAACTGGTGCGGTTCATGCTTTACAGATTGGAACATCACGACAGTGGGGTGGAACTGTATAAT
TGTTGCTACGAGCCCGCCTATACGATAGAGCACATCGTAGAATCCATGAAAAGAGTGACAAATATGAAGGTAAAAGTTCC
TTTCATGCCGGGATGGCTGATCATGACTGCTGCTGGTATAGCCGGAGCGCTAGGCTCTCCGATGGGCATCTGTCCGGCAC
GGGTGAGAAAGCTGCAGATCTCTACGAATATCTGCGGAAAAAAACTGTCCGCTTCGGGCTACCGTTTCCGCTACACCTTT
GAAGAGGCGCTGGCGGACTGGTACAAGGATAATGGTAACCTGTATCTGCAATGA

Upstream 100 bases:

>100_bases
AGTATTTCAATAAGTGGGGATGGATAGTTGATAAAGAACGTTCTGCTTGGAACAGAAAGTTATTGGAAGAATTAGGATAT
AAAAAATAATATTTTCTATA

Downstream 100 bases:

>100_bases
GGAGGCTGATACTTTTTCTTTTGTTTTTTGTAATGATCGGTGCGGTACACGCCCAGTTCACCTACGGGACTACAGGACTG
TTGAATATGCCTACTGCCGA

Product: putative UDP-galactose 4-epimerase

Products: NA

Alternate protein names: UDP-GlcNAc 4-epimerase [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MNYFITGGTGFIGTHLASLLHEVHPETRIYNLDIVEPGTPLPTVKNYKPALGNGEEHAATFIYCDVRQPIELEKVNITPD
DVIFNFAAVHRTPGHPDPAYFETNIRGAENVCAFAERHGIRKIVFTSSIAPYGAAEELKEETTLPMPNTPYGISKLVAEK
IHQTWQAGGEGRQLTIVRPGVVFGRGENGNFTRLYWGIRGHKFMYPGRKDTIKACIYVKELVRFMLYRLEHHDSGVELYN
CCYEPAYTIEHIVESMKRVTNMKVKVPFMPGWLIMTAAGIAGALGSPMGICPARVRKLQISTNICGKKLSASGYRFRYTF
EEALADWYKDNGNLYLQ

Sequences:

>Translated_337_residues
MNYFITGGTGFIGTHLASLLHEVHPETRIYNLDIVEPGTPLPTVKNYKPALGNGEEHAATFIYCDVRQPIELEKVNITPD
DVIFNFAAVHRTPGHPDPAYFETNIRGAENVCAFAERHGIRKIVFTSSIAPYGAAEELKEETTLPMPNTPYGISKLVAEK
IHQTWQAGGEGRQLTIVRPGVVFGRGENGNFTRLYWGIRGHKFMYPGRKDTIKACIYVKELVRFMLYRLEHHDSGVELYN
CCYEPAYTIEHIVESMKRVTNMKVKVPFMPGWLIMTAAGIAGALGSPMGICPARVRKLQISTNICGKKLSASGYRFRYTF
EEALADWYKDNGNLYLQ
>Mature_337_residues
MNYFITGGTGFIGTHLASLLHEVHPETRIYNLDIVEPGTPLPTVKNYKPALGNGEEHAATFIYCDVRQPIELEKVNITPD
DVIFNFAAVHRTPGHPDPAYFETNIRGAENVCAFAERHGIRKIVFTSSIAPYGAAEELKEETTLPMPNTPYGISKLVAEK
IHQTWQAGGEGRQLTIVRPGVVFGRGENGNFTRLYWGIRGHKFMYPGRKDTIKACIYVKELVRFMLYRLEHHDSGVELYN
CCYEPAYTIEHIVESMKRVTNMKVKVPFMPGWLIMTAAGIAGALGSPMGICPARVRKLQISTNICGKKLSASGYRFRYTF
EEALADWYKDNGNLYLQ

Specific function: Converts UDP-GlcNAc to UDP-GalNAc. Essential for O antigen synthesis [H]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.7 [H]

Molecular weight: Translated: 37884; Mature: 37884

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYFITGGTGFIGTHLASLLHEVHPETRIYNLDIVEPGTPLPTVKNYKPALGNGEEHAAT
CCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE
FIYCDVRQPIELEKVNITPDDVIFNFAAVHRTPGHPDPAYFETNIRGAENVCAFAERHGI
EEEEECCCCCEEEEECCCHHHHHHHHHHEECCCCCCCCCEEECCCCCHHHHHHHHHHCCC
RKIVFTSSIAPYGAAEELKEETTLPMPNTPYGISKLVAEKIHQTWQAGGEGRQLTIVRPG
EEEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
VVFGRGENGNFTRLYWGIRGHKFMYPGRKDTIKACIYVKELVRFMLYRLEHHDSGVELYN
EEEECCCCCCEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
CCYEPAYTIEHIVESMKRVTNMKVKVPFMPGWLIMTAAGIAGALGSPMGICPARVRKLQI
HHCCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHEEEEE
STNICGKKLSASGYRFRYTFEEALADWYKDNGNLYLQ
ECCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCEEEC
>Mature Secondary Structure
MNYFITGGTGFIGTHLASLLHEVHPETRIYNLDIVEPGTPLPTVKNYKPALGNGEEHAAT
CCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE
FIYCDVRQPIELEKVNITPDDVIFNFAAVHRTPGHPDPAYFETNIRGAENVCAFAERHGI
EEEEECCCCCEEEEECCCHHHHHHHHHHEECCCCCCCCCEEECCCCCHHHHHHHHHHCCC
RKIVFTSSIAPYGAAEELKEETTLPMPNTPYGISKLVAEKIHQTWQAGGEGRQLTIVRPG
EEEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
VVFGRGENGNFTRLYWGIRGHKFMYPGRKDTIKACIYVKELVRFMLYRLEHHDSGVELYN
EEEECCCCCCEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
CCYEPAYTIEHIVESMKRVTNMKVKVPFMPGWLIMTAAGIAGALGSPMGICPARVRKLQI
HHCCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHEEEEE
STNICGKKLSASGYRFRYTFEEALADWYKDNGNLYLQ
ECCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11976290; 11206551; 11258796 [H]