Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

Click here to switch to the map view.

The map label for this gene is 150005453

Identifier: 150005453

GI number: 150005453

Start: 3730291

End: 3731082

Strand: Direct

Name: 150005453

Synonym: BVU_2936

Alternate gene names: NA

Gene position: 3730291-3731082 (Clockwise)

Preceding gene: 150005452

Following gene: 150005454

Centisome position: 72.25

GC content: 46.59

Gene sequence:

>792_bases
ATGGATATGGAACTTACTTATATATATCATAGCGGATTCGCCTTGTCAGGCGATGGCTTTACTGTAATCATGGATTATTA
CCGTGATTCGGAGGATGGACAGGCGCAGGCGGATTTGAACCGGTTGATGGATGGGACTTTCAGCAATCAAGAGGCGGGAA
TGCCGGAAGGAACTGTACACAGCGAATTATTGCGGAGACCCGGAAAACTGTATGTGCTGGCCAGTCATTTTCATCCGGAT
CATTTTAATAAAGAGGTATTGCAATGGCGTGAACAGCGGCCGGATATCATCTATATTTTCTCGAAAGACATTTTGCGTCA
TCGCAGGGCGCAGAAAGAAGATGCCGTCTGGCTGAAAAAAGGAGAGGAATATAAGGATGAAACATTGAGCGTGCGTGCTT
TCGGTTCCACGGATGTGGGAGTATCGTTTTTGCTTCAGACAGGTGGAAAAAAGATTTTTCATGCCGGTGATTTGAATAAC
TGGCATTGGATGGATGAGAGTACCGAGGCGGAGTGGAAGGGAGCCGAGAAGAATTTCCTGCATGAGCTGGATGATCTTTA
CGCCTATACGCCCGAAGTGGATGTGGCGATGTTTCCCGTTGACCCCCGTTTGGGAAAAGAATACATGCGGGGTGCCGGAC
AGTTTGTAACAAAGATAAAAACTCATATCTTTGTACCCATGCATTTCACACCGGAGTATGCCAAGGCAAATGCTTTCCGC
GACTTTGCCGAAGCGCATGGAGTGCGTTTTGTGTCATTGACACATCGCGGACAAAAAATAGAGATTGAATAA

Upstream 100 bases:

>100_bases
TGACTCCCTGATACATTCGGGTAAAGTGAATTATATGTTTCTGGAGATTGATAAAAAGACCCGTGCGCAGGTGCAACCTA
TCGGTAAATAAATTTGTTGT

Downstream 100 bases:

>100_bases
CAAAAGAATAACACAATATGAAAGTAAAAGGAAGATTTGATCATTTCAATATCAATGTAACTGATCTGGACAAGAGTATC
AAGTTTTATGAAACAGCGTT

Product: putative metal dependent hydrolase

Products: NA

Alternate protein names: Hydrolase; SWF/SNF Family Helicase

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MDMELTYIYHSGFALSGDGFTVIMDYYRDSEDGQAQADLNRLMDGTFSNQEAGMPEGTVHSELLRRPGKLYVLASHFHPD
HFNKEVLQWREQRPDIIYIFSKDILRHRRAQKEDAVWLKKGEEYKDETLSVRAFGSTDVGVSFLLQTGGKKIFHAGDLNN
WHWMDESTEAEWKGAEKNFLHELDDLYAYTPEVDVAMFPVDPRLGKEYMRGAGQFVTKIKTHIFVPMHFTPEYAKANAFR
DFAEAHGVRFVSLTHRGQKIEIE

Sequences:

>Translated_263_residues
MDMELTYIYHSGFALSGDGFTVIMDYYRDSEDGQAQADLNRLMDGTFSNQEAGMPEGTVHSELLRRPGKLYVLASHFHPD
HFNKEVLQWREQRPDIIYIFSKDILRHRRAQKEDAVWLKKGEEYKDETLSVRAFGSTDVGVSFLLQTGGKKIFHAGDLNN
WHWMDESTEAEWKGAEKNFLHELDDLYAYTPEVDVAMFPVDPRLGKEYMRGAGQFVTKIKTHIFVPMHFTPEYAKANAFR
DFAEAHGVRFVSLTHRGQKIEIE
>Mature_263_residues
MDMELTYIYHSGFALSGDGFTVIMDYYRDSEDGQAQADLNRLMDGTFSNQEAGMPEGTVHSELLRRPGKLYVLASHFHPD
HFNKEVLQWREQRPDIIYIFSKDILRHRRAQKEDAVWLKKGEEYKDETLSVRAFGSTDVGVSFLLQTGGKKIFHAGDLNN
WHWMDESTEAEWKGAEKNFLHELDDLYAYTPEVDVAMFPVDPRLGKEYMRGAGQFVTKIKTHIFVPMHFTPEYAKANAFR
DFAEAHGVRFVSLTHRGQKIEIE

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30418; Mature: 30418

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMELTYIYHSGFALSGDGFTVIMDYYRDSEDGQAQADLNRLMDGTFSNQEAGMPEGTVH
CCCEEEEEEECCEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHH
SELLRRPGKLYVLASHFHPDHFNKEVLQWREQRPDIIYIFSKDILRHRRAQKEDAVWLKK
HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCEEECC
GEEYKDETLSVRAFGSTDVGVSFLLQTGGKKIFHAGDLNNWHWMDESTEAEWKGAEKNFL
CCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
HELDDLYAYTPEVDVAMFPVDPRLGKEYMRGAGQFVTKIKTHIFVPMHFTPEYAKANAFR
HHHHHHHEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHH
DFAEAHGVRFVSLTHRGQKIEIE
HHHHHCCEEEEEEECCCCEEEEC
>Mature Secondary Structure
MDMELTYIYHSGFALSGDGFTVIMDYYRDSEDGQAQADLNRLMDGTFSNQEAGMPEGTVH
CCCEEEEEEECCEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHH
SELLRRPGKLYVLASHFHPDHFNKEVLQWREQRPDIIYIFSKDILRHRRAQKEDAVWLKK
HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCEEECC
GEEYKDETLSVRAFGSTDVGVSFLLQTGGKKIFHAGDLNNWHWMDESTEAEWKGAEKNFL
CCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
HELDDLYAYTPEVDVAMFPVDPRLGKEYMRGAGQFVTKIKTHIFVPMHFTPEYAKANAFR
HHHHHHHEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHH
DFAEAHGVRFVSLTHRGQKIEIE
HHHHHCCEEEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA