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The map label for this gene is cirA [C]

Identifier: 150005237

GI number: 150005237

Start: 3447721

End: 3449880

Strand: Direct

Name: cirA [C]

Synonym: BVU_2708

Alternate gene names: 150005237

Gene position: 3447721-3449880 (Clockwise)

Preceding gene: 150005236

Following gene: 150005238

Centisome position: 66.78

GC content: 43.01

Gene sequence:

>2160_bases
ATGCGTATCAGATATGTTTCGGGTACGCTGGGAATGTTTTTTACCTTGTTTTCAAATGCACAGGTAGTTTCTGATACGAT
TAAAAGTGTGGATTTATCCGAAGTGGTGGTGACTGGATCTTACCGACATGCTCAGGAGAAAAAGACTACCCTGACACTCG
AGTTGTTTCAGAAAGATTATTTGAACCGGCATTTTACCGGTAATTTGGTACAGACTTTGAAAAATGTTCCCGGTGTACAC
TCGATGGATATTGGTGCGGGATTCTCCAAACCTATGATTCGTGGTTTGGGATTCAACCGTATTGCCGTATCCGAAAATGG
AATAAAACAAGAGGGGCAACAATGGGGGGCCGACCATGGACTGGAAATTGATGCTTTTAATGTAGACGAGGTACGGATTC
TGAAAGGTCCGTCTTCACTGCTCTACGGCAGTGATGCGATGGGAGGTGTCATCGAAATCCTTCCTTTGCTTCCACAAAAA
GAGAACCGATTTTTTGGTGAGGCTGCCTTATTGGGAAAATCAGTGAACGGCACTGTGGGCGGTTCACTGATGCTAGGTAT
TGAGAAGAATGCATGGCTGGTCAGAGTACGTTTTTCAGAACAGCACTATGGAGATTATCATGTACCGGTCGATACCATTG
TATATCTTACCCAGTTGGTGCCTGTTTACGGTCGTAAGCTGAAAAACACCGCTGGGTTCGAGCGCAATGTTTCTGTCATG
GGAGATTATAGAAAGAAGTTTTATCAGATGAATATTGCTGTGAGCAATGTTTATCAGAAGATGGGCTTCTTTCTCGGTGC
TCATGGCATTCCTGATATTTCCCGTTTGGAGGATGATGAGAACAGCCGTAATATTGAATTGCCTTATAGCAAAGTGAACC
ATCTTAAAGTAACCACGCATCAACAGTATCTTTGGAATGGGATACAACTTTCAGGTGATTTCGGCTATCAGTTCAATCAT
CGGGAGGAATGGAGTGCTTTCCATACCCATTATGACACTCAGATGATGCCTGCAAAGGATCCGGATAGGGAACTGGTGTT
CAAACTGCATACATTCAGCTCCTCTCTGAAGCTGCGGTTGTCCAGCTCTTCTTCCTGGGAGCATATGGCAGGGTGGAATA
TGCAGATACAGAAAAATGCGATTGGCGGATATTCTTTTCTGCTACCGGAATACAAGCGTTTTACTACCGGAGCTTTTTGG
CTGACGACTTTCCGATTGGATAATCAGTTGTCTGTAACTGGTGGGATACGTTATGATCGGGGAAGGATTGATATAGCGGC
ATTCGAAGATCCTTATTTGGTGGAGTATCTGCACAGACAGGGATATGAAGAAGAGGTAATACAGGCATATCGTTGGCGAA
GTTATCCGGTGGACAGGGCTTATGGTAATTATTCCTGTTCGGCGGGAGTAGTGTGGACACCCGCTGCCGGTCATCTTCTG
AAGATGAATGTGGGACGTAGCTTCCGTTTGCCGGGAGTCAATGAATTAGCATCCAACGGAGTGCATCACGGAACTTTCCG
TCATGAAAAAGGGGATGCCACTCTTTCTTCGGAACAAGGATGGCAGATTGATGCTTCCTATACCTTGGCTTATAAAAAAA
TGGAACTGGTTGTTTCATCTTTTGCCAGTTGGTTTGATAATTATATTTATTTGCGCCCTATGGGAGAATGGTCTGTATTG
CCCCATGCTGGACAGATTTATCAATATAGTGGCGCACGTGCTTTGTTCATGGGTGGTGAGATAAATTTCAATATGGATTT
TCTACGCCATTTTAATTATCGTTTAGTCGGTGAGTATGTCTATACTTATAATCGTGACGAACATACGGCTTTAAGTTTTT
CACCTCCTGTATCCATGCGTAATATTCTGACATGGAATAAAAAGGATTTTCAGTTGTATGCTGAACTTCAAAGTATAGCT
TCGCAGAACCGTATAGCGAGGAATGAAGACCGCACACCCGGAGCTTGTTTGATTCATCTGGGTGGAAGTATTCATATACC
TATGGCCAAGGCGGATATTGAAATATCTTTGGGCATTCGTAATTTGTCGGATGTGAAATATTACAATCATTTGAGTTTTT
ATAGGAAAGTGGAAATCCCTGAACCGGGAAGAAGCTTTCAGATTTCGATTAAAGTACCATTTAAACAATTATTAAAATGA

Upstream 100 bases:

>100_bases
TTGCCAGGTTAAATCTTATCCTTATTATCTGCGTGCACCTCCCGTTTGCTGATTCACATAGTATCTTTTATTTATTCACA
ACATCAAATGATTGTAATTT

Downstream 100 bases:

>100_bases
AAACAAAATTTTATTTTCTTGTAATCAGCTTTTTGGCTATATGCTCTGTTTGTCTGCCTGCGTGTGATAATGATGAAAAA
GGGGATGTAACAAAGCCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 719; Mature: 719

Protein sequence:

>719_residues
MRIRYVSGTLGMFFTLFSNAQVVSDTIKSVDLSEVVVTGSYRHAQEKKTTLTLELFQKDYLNRHFTGNLVQTLKNVPGVH
SMDIGAGFSKPMIRGLGFNRIAVSENGIKQEGQQWGADHGLEIDAFNVDEVRILKGPSSLLYGSDAMGGVIEILPLLPQK
ENRFFGEAALLGKSVNGTVGGSLMLGIEKNAWLVRVRFSEQHYGDYHVPVDTIVYLTQLVPVYGRKLKNTAGFERNVSVM
GDYRKKFYQMNIAVSNVYQKMGFFLGAHGIPDISRLEDDENSRNIELPYSKVNHLKVTTHQQYLWNGIQLSGDFGYQFNH
REEWSAFHTHYDTQMMPAKDPDRELVFKLHTFSSSLKLRLSSSSSWEHMAGWNMQIQKNAIGGYSFLLPEYKRFTTGAFW
LTTFRLDNQLSVTGGIRYDRGRIDIAAFEDPYLVEYLHRQGYEEEVIQAYRWRSYPVDRAYGNYSCSAGVVWTPAAGHLL
KMNVGRSFRLPGVNELASNGVHHGTFRHEKGDATLSSEQGWQIDASYTLAYKKMELVVSSFASWFDNYIYLRPMGEWSVL
PHAGQIYQYSGARALFMGGEINFNMDFLRHFNYRLVGEYVYTYNRDEHTALSFSPPVSMRNILTWNKKDFQLYAELQSIA
SQNRIARNEDRTPGACLIHLGGSIHIPMAKADIEISLGIRNLSDVKYYNHLSFYRKVEIPEPGRSFQISIKVPFKQLLK

Sequences:

>Translated_719_residues
MRIRYVSGTLGMFFTLFSNAQVVSDTIKSVDLSEVVVTGSYRHAQEKKTTLTLELFQKDYLNRHFTGNLVQTLKNVPGVH
SMDIGAGFSKPMIRGLGFNRIAVSENGIKQEGQQWGADHGLEIDAFNVDEVRILKGPSSLLYGSDAMGGVIEILPLLPQK
ENRFFGEAALLGKSVNGTVGGSLMLGIEKNAWLVRVRFSEQHYGDYHVPVDTIVYLTQLVPVYGRKLKNTAGFERNVSVM
GDYRKKFYQMNIAVSNVYQKMGFFLGAHGIPDISRLEDDENSRNIELPYSKVNHLKVTTHQQYLWNGIQLSGDFGYQFNH
REEWSAFHTHYDTQMMPAKDPDRELVFKLHTFSSSLKLRLSSSSSWEHMAGWNMQIQKNAIGGYSFLLPEYKRFTTGAFW
LTTFRLDNQLSVTGGIRYDRGRIDIAAFEDPYLVEYLHRQGYEEEVIQAYRWRSYPVDRAYGNYSCSAGVVWTPAAGHLL
KMNVGRSFRLPGVNELASNGVHHGTFRHEKGDATLSSEQGWQIDASYTLAYKKMELVVSSFASWFDNYIYLRPMGEWSVL
PHAGQIYQYSGARALFMGGEINFNMDFLRHFNYRLVGEYVYTYNRDEHTALSFSPPVSMRNILTWNKKDFQLYAELQSIA
SQNRIARNEDRTPGACLIHLGGSIHIPMAKADIEISLGIRNLSDVKYYNHLSFYRKVEIPEPGRSFQISIKVPFKQLLK
>Mature_719_residues
MRIRYVSGTLGMFFTLFSNAQVVSDTIKSVDLSEVVVTGSYRHAQEKKTTLTLELFQKDYLNRHFTGNLVQTLKNVPGVH
SMDIGAGFSKPMIRGLGFNRIAVSENGIKQEGQQWGADHGLEIDAFNVDEVRILKGPSSLLYGSDAMGGVIEILPLLPQK
ENRFFGEAALLGKSVNGTVGGSLMLGIEKNAWLVRVRFSEQHYGDYHVPVDTIVYLTQLVPVYGRKLKNTAGFERNVSVM
GDYRKKFYQMNIAVSNVYQKMGFFLGAHGIPDISRLEDDENSRNIELPYSKVNHLKVTTHQQYLWNGIQLSGDFGYQFNH
REEWSAFHTHYDTQMMPAKDPDRELVFKLHTFSSSLKLRLSSSSSWEHMAGWNMQIQKNAIGGYSFLLPEYKRFTTGAFW
LTTFRLDNQLSVTGGIRYDRGRIDIAAFEDPYLVEYLHRQGYEEEVIQAYRWRSYPVDRAYGNYSCSAGVVWTPAAGHLL
KMNVGRSFRLPGVNELASNGVHHGTFRHEKGDATLSSEQGWQIDASYTLAYKKMELVVSSFASWFDNYIYLRPMGEWSVL
PHAGQIYQYSGARALFMGGEINFNMDFLRHFNYRLVGEYVYTYNRDEHTALSFSPPVSMRNILTWNKKDFQLYAELQSIA
SQNRIARNEDRTPGACLIHLGGSIHIPMAKADIEISLGIRNLSDVKYYNHLSFYRKVEIPEPGRSFQISIKVPFKQLLK

Specific function: Probable receptor, tonB-dependent [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 82015; Mature: 82015

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRYVSGTLGMFFTLFSNAQVVSDTIKSVDLSEVVVTGSYRHAQEKKTTLTLELFQKDY
CEEEEECCHHHHHHHHHCCCHHHHHHHHCCCHHHEEEECCCHHCCCCCCEEEEEHHHHHH
LNRHFTGNLVQTLKNVPGVHSMDIGAGFSKPMIRGLGFNRIAVSENGIKQEGQQWGADHG
CCCCCCCHHHHHHHHCCCCCEECCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHCCCCCC
LEIDAFNVDEVRILKGPSSLLYGSDAMGGVIEILPLLPQKENRFFGEAALLGKSVNGTVG
CEEEEECCCCEEEEECCCCEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCC
GSLMLGIEKNAWLVRVRFSEQHYGDYHVPVDTIVYLTQLVPVYGRKLKNTAGFERNVSVM
CEEEEEEECCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
GDYRKKFYQMNIAVSNVYQKMGFFLGAHGIPDISRLEDDENSRNIELPYSKVNHLKVTTH
HHHHHHHEEEEHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEECCHHHCCEEEEEEC
QQYLWNGIQLSGDFGYQFNHREEWSAFHTHYDTQMMPAKDPDRELVFKLHTFSSSLKLRL
HHHHCCCEEEECCCCCCCCCCHHHHHHHHCCCCEECCCCCCCHHEEEEEEECCCEEEEEE
SSSSSWEHMAGWNMQIQKNAIGGYSFLLPEYKRFTTGAFWLTTFRLDNQLSVTGGIRYDR
CCCCCCCHHCCCCEEEEECCCCCEEECCCCHHHHCCCEEEEEEEEECCEEEEECCEEECC
GRIDIAAFEDPYLVEYLHRQGYEEEVIQAYRWRSYPVDRAYGNYSCSAGVVWTPAAGHLL
CEEEEEECCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCEE
KMNVGRSFRLPGVNELASNGVHHGTFRHEKGDATLSSEQGWQIDASYTLAYKKMELVVSS
EEECCCEECCCCHHHHHHCCCCCCCCEECCCCCEECCCCCEEEECEEEEHHHHHHHHHHH
FASWFDNYIYLRPMGEWSVLPHAGQIYQYSGARALFMGGEINFNMDFLRHFNYRLVGEYV
HHHHHCCEEEEEECCCCCCCCCCCCEEEECCCEEEEECCEEECCHHHHHHCCEEEEEEEE
YTYNRDEHTALSFSPPVSMRNILTWNKKDFQLYAELQSIASQNRIARNEDRTPGACLIHL
EEECCCCCEEEEECCCCCHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
GGSIHIPMAKADIEISLGIRNLSDVKYYNHLSFYRKVEIPEPGRSFQISIKVPFKQLLK
CCEEEEEEEECCEEEEEECCCCCHHHHHHHEEEEEEECCCCCCCCEEEEEECCHHHHCC
>Mature Secondary Structure
MRIRYVSGTLGMFFTLFSNAQVVSDTIKSVDLSEVVVTGSYRHAQEKKTTLTLELFQKDY
CEEEEECCHHHHHHHHHCCCHHHHHHHHCCCHHHEEEECCCHHCCCCCCEEEEEHHHHHH
LNRHFTGNLVQTLKNVPGVHSMDIGAGFSKPMIRGLGFNRIAVSENGIKQEGQQWGADHG
CCCCCCCHHHHHHHHCCCCCEECCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHCCCCCC
LEIDAFNVDEVRILKGPSSLLYGSDAMGGVIEILPLLPQKENRFFGEAALLGKSVNGTVG
CEEEEECCCCEEEEECCCCEEECCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCC
GSLMLGIEKNAWLVRVRFSEQHYGDYHVPVDTIVYLTQLVPVYGRKLKNTAGFERNVSVM
CEEEEEEECCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
GDYRKKFYQMNIAVSNVYQKMGFFLGAHGIPDISRLEDDENSRNIELPYSKVNHLKVTTH
HHHHHHHEEEEHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEECCHHHCCEEEEEEC
QQYLWNGIQLSGDFGYQFNHREEWSAFHTHYDTQMMPAKDPDRELVFKLHTFSSSLKLRL
HHHHCCCEEEECCCCCCCCCCHHHHHHHHCCCCEECCCCCCCHHEEEEEEECCCEEEEEE
SSSSSWEHMAGWNMQIQKNAIGGYSFLLPEYKRFTTGAFWLTTFRLDNQLSVTGGIRYDR
CCCCCCCHHCCCCEEEEECCCCCEEECCCCHHHHCCCEEEEEEEEECCEEEEECCEEECC
GRIDIAAFEDPYLVEYLHRQGYEEEVIQAYRWRSYPVDRAYGNYSCSAGVVWTPAAGHLL
CEEEEEECCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCEE
KMNVGRSFRLPGVNELASNGVHHGTFRHEKGDATLSSEQGWQIDASYTLAYKKMELVVSS
EEECCCEECCCCHHHHHHCCCCCCCCEECCCCCEECCCCCEEEECEEEEHHHHHHHHHHH
FASWFDNYIYLRPMGEWSVLPHAGQIYQYSGARALFMGGEINFNMDFLRHFNYRLVGEYV
HHHHHCCEEEEEECCCCCCCCCCCCEEEECCCEEEEECCEEECCHHHHHHCCEEEEEEEE
YTYNRDEHTALSFSPPVSMRNILTWNKKDFQLYAELQSIASQNRIARNEDRTPGACLIHL
EEECCCCCEEEEECCCCCHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
GGSIHIPMAKADIEISLGIRNLSDVKYYNHLSFYRKVEIPEPGRSFQISIKVPFKQLLK
CCEEEEEEEECCEEEEEECCCCCHHHHHHHEEEEEEECCCCCCCCEEEEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]