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The map label for this gene is dedA [H]

Identifier: 150005233

GI number: 150005233

Start: 3444810

End: 3445454

Strand: Direct

Name: dedA [H]

Synonym: BVU_2704

Alternate gene names: 150005233

Gene position: 3444810-3445454 (Clockwise)

Preceding gene: 150005232

Following gene: 150005234

Centisome position: 66.72

GC content: 35.97

Gene sequence:

>645_bases
ATGGAATTTTTATTGGACTTTATACTTCACATTGACCAATATATGATAGATATTGTTCAAGAATATCATACTTGGGCTTA
TGTCATACTGTTTATAATCATTTTTTGCGAAACGGGATTGGTTGTCACTCCATTCCTCCCCGGAGATTCTTTGCTTTTTG
TCGCGGGAGCTATTTCGGCTTTGCCCGATATGCCTTTGGAAGTTAATATTCTCGCTTTGGTTTTATTTCTTTCAGCTGTG
CTGGGCGATTCCTGTAATTATATGATAGGACACTTTTTTGGAAATAAACTTTTCAATAATCCCGATTCCCGTATATTTAA
GCAAAGTCATTTGGAAAAAACACATGAATTTTATAAAAAATACGGAGGAAAGACCATCATTATTGCCCGTTTTGTACCTA
TAGTCCGTACATTTGCTCCTTTTGTAGCAGGTATGGGCAAAATGCATTATTATTATTTTATGGTGTATAATCTGATAGGG
GGAGCTTTGTGGGTTGGTATTTTCTGTTATGCCGGTTATTTTTTCGGTGATCTTCCATTTGTACAGAAAAATCTGAAATT
GCTGATTGTGGCTATTATTGTCGTTTCTATATTGCCTGCCGTTATAGAAGTAGGCAGGAATAAGTGGAAAACTCGCCATT
ACTAA

Upstream 100 bases:

>100_bases
TATATCTTACATTTTTTTGTTTTTATATTTTCATAATGGGAACTGGGGTGGATGCTTGTTCCTTTTATGAACGGTGTTAT
ATGTTAATAACTAATATATA

Downstream 100 bases:

>100_bases
AATCAAACATATCAAAAACAATTTATTCAAATTACATTTATGAAAAATTCTTTTTTTAGTCGATTTACACCTCAAGAACC
TAAGTTTTTCCCTATGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MEFLLDFILHIDQYMIDIVQEYHTWAYVILFIIIFCETGLVVTPFLPGDSLLFVAGAISALPDMPLEVNILALVLFLSAV
LGDSCNYMIGHFFGNKLFNNPDSRIFKQSHLEKTHEFYKKYGGKTIIIARFVPIVRTFAPFVAGMGKMHYYYFMVYNLIG
GALWVGIFCYAGYFFGDLPFVQKNLKLLIVAIIVVSILPAVIEVGRNKWKTRHY

Sequences:

>Translated_214_residues
MEFLLDFILHIDQYMIDIVQEYHTWAYVILFIIIFCETGLVVTPFLPGDSLLFVAGAISALPDMPLEVNILALVLFLSAV
LGDSCNYMIGHFFGNKLFNNPDSRIFKQSHLEKTHEFYKKYGGKTIIIARFVPIVRTFAPFVAGMGKMHYYYFMVYNLIG
GALWVGIFCYAGYFFGDLPFVQKNLKLLIVAIIVVSILPAVIEVGRNKWKTRHY
>Mature_214_residues
MEFLLDFILHIDQYMIDIVQEYHTWAYVILFIIIFCETGLVVTPFLPGDSLLFVAGAISALPDMPLEVNILALVLFLSAV
LGDSCNYMIGHFFGNKLFNNPDSRIFKQSHLEKTHEFYKKYGGKTIIIARFVPIVRTFAPFVAGMGKMHYYYFMVYNLIG
GALWVGIFCYAGYFFGDLPFVQKNLKLLIVAIIVVSILPAVIEVGRNKWKTRHY

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=205, Percent_Identity=64.8780487804878, Blast_Score=283, Evalue=9e-78,
Organism=Escherichia coli, GI1789481, Length=154, Percent_Identity=35.7142857142857, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1789384, Length=193, Percent_Identity=29.5336787564767, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24500; Mature: 24500

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLLDFILHIDQYMIDIVQEYHTWAYVILFIIIFCETGLVVTPFLPGDSLLFVAGAISA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH
LPDMPLEVNILALVLFLSAVLGDSCNYMIGHFFGNKLFNNPDSRIFKQSHLEKTHEFYKK
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
YGGKTIIIARFVPIVRTFAPFVAGMGKMHYYYFMVYNLIGGALWVGIFCYAGYFFGDLPF
HCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VQKNLKLLIVAIIVVSILPAVIEVGRNKWKTRHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEFLLDFILHIDQYMIDIVQEYHTWAYVILFIIIFCETGLVVTPFLPGDSLLFVAGAISA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH
LPDMPLEVNILALVLFLSAVLGDSCNYMIGHFFGNKLFNNPDSRIFKQSHLEKTHEFYKK
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
YGGKTIIIARFVPIVRTFAPFVAGMGKMHYYYFMVYNLIGGALWVGIFCYAGYFFGDLPF
HCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VQKNLKLLIVAIIVVSILPAVIEVGRNKWKTRHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]