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The map label for this gene is yidE [C]

Identifier: 150005219

GI number: 150005219

Start: 3416249

End: 3417847

Strand: Direct

Name: yidE [C]

Synonym: BVU_2689

Alternate gene names: 150005219

Gene position: 3416249-3417847 (Clockwise)

Preceding gene: 150005218

Following gene: 150005220

Centisome position: 66.17

GC content: 46.9

Gene sequence:

>1599_bases
ATGTTAATTGATTTACTGCATTCTTCTTATTTCTCGCTCTTCCTTATTGTAGCGTTGGGTTTTATGCTAGGGAGGATTAA
GATAAAGGGTTTGTCGCTGGATGTGTCGGCCGTTATCTTCATTGCCTTGCTTTTCGGACATTTCGGTGTGATCATTCCTA
AAGAATTGGGGAACTTCGGTCTGGTGCTTTTTATCTTTACCATCGGTATTCAGGCCGGTCCCGGATTTTTCGATTCTTTC
AGAAGTAAAGGAAAGACACTGATTCTTATCACTATGCTTATTATTTGCTCTGCCTGTCTGACGGCGGTAGGACTGAAGTA
TGCTTTTGACATTGATACGCCTAGTGTGGTGGGATTGATAGCAGGGGCATTGACCAGTACGCCCGGTCTGGCGGTAGCTA
TAGACAGTACAAATTCACCGTTGGCTTCCATTGCATACGGTATTGCTTACCCGTTTGGAGTGATAGGGGTGATTTTGTTT
GTGAAGCTGTTACCCAAGATTATGCGGGTGGATCTGGATAAAGAAGCGCGCAGGTTGGAACTGGAACGGCGCAGCGGTTT
TCCGGAACTGACAACTTGCATTTTCAGAGTAACCAATCAAGCGGTATTCGGACGTACTTTGGCGCAAATAAATGCGCGTG
CCATGACGGGGGCCGTCATTTCACGGGTAAAGCATGAGGATTCTATATTGATGCCTAAAGCGAATACCATGTTGCTGGAA
GGGGACTATGTGCAGGCGGTGGGAAGTGAGGAAGCGCTGAATCAGTTTGCCGTATTGGTTGGAGAACGGGAGGAAGGTGA
ATTGCCTCTGGATCAGACACAGGAGATTGAATCTTTATTGCTGACAAAGAAAGATATGATAAACAAGCAATTGGGGGATC
TGAATTTACAACGTAACTTTGGTTGTACGGTAACCCGTATCCGTCGAAGCGGCATAGACTTGTCACCTTCTCCGGATTTG
GCCTTGAAATTCGGTGATAAGCTGATGGTGGTCGGTGAACGGGAAGGACTCAGAGGCGTTGCCCGTTTGTTGGGGAATAA
TGCCAAACAGTTGTCTGATACTGATTTCTTCCCGATAGCTATGGGGATTGTATTAGGTGTATTGTTCGGCAAAATAAATA
TTTCATTTTCAGACAGCGTTTCCTTTTCACCCGGATTGACCGGAGGAGTGCTGATGGTGGCATTGCTGCTGAGTGCCGTG
GGAAAGACAGGACCTATATTGTGGTCTATGTCCGGTCCTGCCAATCAGTTGTTACGTCAGTTGGGCTTATTGCTGTTTTT
GGCTGAGGTCGGTACTTCTGCCGGTAAGAATCTGGTGGCTACTTTTCAGGAGAGCGGATTGTTATTGTTCGGAGTGGGGG
CGGCCATTACTGTCGTGCCTATGCTGGTTGCCGTTGTGGTTGGCAGGTTGGTCTTTAAAATCAGTTTGTTGGATTTGCTG
GGCACCATCACCGGTGGTATGACCAGTACGCCCGGTCTTGCGGCAGCCGATTCCATGGTAGATAGTAATATTCCGAGTGT
TGCATATGCTACGGTGTATCCGATTGCAATGGTGTTCCTTATTTTGTTTATACAAGTGATCGCTTCGGCGGTTTATTGA

Upstream 100 bases:

>100_bases
TGTGCAATAGGAGGAATGGTTTCTGCAAATAGTAAGGGGAAAGTTTCAGCATTTGGCATTTTTACATATCTTTGTGCTCT
GAAACTAACCTCTTAAAAAT

Downstream 100 bases:

>100_bases
TATATCAAACAGCCAGGTGGGTATGTGCCAAAGGTAGTAAATACTTTTGGCACATTTTTTATTTGGATGAATATTGTATT
TTTATTTATCGATATGAGGA

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MLIDLLHSSYFSLFLIVALGFMLGRIKIKGLSLDVSAVIFIALLFGHFGVIIPKELGNFGLVLFIFTIGIQAGPGFFDSF
RSKGKTLILITMLIICSACLTAVGLKYAFDIDTPSVVGLIAGALTSTPGLAVAIDSTNSPLASIAYGIAYPFGVIGVILF
VKLLPKIMRVDLDKEARRLELERRSGFPELTTCIFRVTNQAVFGRTLAQINARAMTGAVISRVKHEDSILMPKANTMLLE
GDYVQAVGSEEALNQFAVLVGEREEGELPLDQTQEIESLLLTKKDMINKQLGDLNLQRNFGCTVTRIRRSGIDLSPSPDL
ALKFGDKLMVVGEREGLRGVARLLGNNAKQLSDTDFFPIAMGIVLGVLFGKINISFSDSVSFSPGLTGGVLMVALLLSAV
GKTGPILWSMSGPANQLLRQLGLLLFLAEVGTSAGKNLVATFQESGLLLFGVGAAITVVPMLVAVVVGRLVFKISLLDLL
GTITGGMTSTPGLAAADSMVDSNIPSVAYATVYPIAMVFLILFIQVIASAVY

Sequences:

>Translated_532_residues
MLIDLLHSSYFSLFLIVALGFMLGRIKIKGLSLDVSAVIFIALLFGHFGVIIPKELGNFGLVLFIFTIGIQAGPGFFDSF
RSKGKTLILITMLIICSACLTAVGLKYAFDIDTPSVVGLIAGALTSTPGLAVAIDSTNSPLASIAYGIAYPFGVIGVILF
VKLLPKIMRVDLDKEARRLELERRSGFPELTTCIFRVTNQAVFGRTLAQINARAMTGAVISRVKHEDSILMPKANTMLLE
GDYVQAVGSEEALNQFAVLVGEREEGELPLDQTQEIESLLLTKKDMINKQLGDLNLQRNFGCTVTRIRRSGIDLSPSPDL
ALKFGDKLMVVGEREGLRGVARLLGNNAKQLSDTDFFPIAMGIVLGVLFGKINISFSDSVSFSPGLTGGVLMVALLLSAV
GKTGPILWSMSGPANQLLRQLGLLLFLAEVGTSAGKNLVATFQESGLLLFGVGAAITVVPMLVAVVVGRLVFKISLLDLL
GTITGGMTSTPGLAAADSMVDSNIPSVAYATVYPIAMVFLILFIQVIASAVY
>Mature_532_residues
MLIDLLHSSYFSLFLIVALGFMLGRIKIKGLSLDVSAVIFIALLFGHFGVIIPKELGNFGLVLFIFTIGIQAGPGFFDSF
RSKGKTLILITMLIICSACLTAVGLKYAFDIDTPSVVGLIAGALTSTPGLAVAIDSTNSPLASIAYGIAYPFGVIGVILF
VKLLPKIMRVDLDKEARRLELERRSGFPELTTCIFRVTNQAVFGRTLAQINARAMTGAVISRVKHEDSILMPKANTMLLE
GDYVQAVGSEEALNQFAVLVGEREEGELPLDQTQEIESLLLTKKDMINKQLGDLNLQRNFGCTVTRIRRSGIDLSPSPDL
ALKFGDKLMVVGEREGLRGVARLLGNNAKQLSDTDFFPIAMGIVLGVLFGKINISFSDSVSFSPGLTGGVLMVALLLSAV
GKTGPILWSMSGPANQLLRQLGLLLFLAEVGTSAGKNLVATFQESGLLLFGVGAAITVVPMLVAVVVGRLVFKISLLDLL
GTITGGMTSTPGLAAADSMVDSNIPSVAYATVYPIAMVFLILFIQVIASAVY

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI87082315, Length=536, Percent_Identity=32.4626865671642, Blast_Score=275, Evalue=5e-75,
Organism=Escherichia coli, GI1787071, Length=546, Percent_Identity=27.6556776556777, Blast_Score=193, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 56702; Mature: 56702

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDLLHSSYFSLFLIVALGFMLGRIKIKGLSLDVSAVIFIALLFGHFGVIIPKELGNFG
CCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCEEEEHHCCCCH
LVLFIFTIGIQAGPGFFDSFRSKGKTLILITMLIICSACLTAVGLKYAFDIDTPSVVGLI
HHHHHHHHHCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
AGALTSTPGLAVAIDSTNSPLASIAYGIAYPFGVIGVILFVKLLPKIMRVDLDKEARRLE
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LERRSGFPELTTCIFRVTNQAVFGRTLAQINARAMTGAVISRVKHEDSILMPKANTMLLE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEE
GDYVQAVGSEEALNQFAVLVGEREEGELPLDQTQEIESLLLTKKDMINKQLGDLNLQRNF
CCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GCTVTRIRRSGIDLSPSPDLALKFGDKLMVVGEREGLRGVARLLGNNAKQLSDTDFFPIA
CCHHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCHHHHHHHHHCCCCHHCCCCCCHHHH
MGIVLGVLFGKINISFSDSVSFSPGLTGGVLMVALLLSAVGKTGPILWSMSGPANQLLRQ
HHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHH
LGLLLFLAEVGTSAGKNLVATFQESGLLLFGVGAAITVVPMLVAVVVGRLVFKISLLDLL
HHHHHHHHHHCCCCCCCCEEEHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTITGGMTSTPGLAAADSMVDSNIPSVAYATVYPIAMVFLILFIQVIASAVY
HHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIDLLHSSYFSLFLIVALGFMLGRIKIKGLSLDVSAVIFIALLFGHFGVIIPKELGNFG
CCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCEEEEHHCCCCH
LVLFIFTIGIQAGPGFFDSFRSKGKTLILITMLIICSACLTAVGLKYAFDIDTPSVVGLI
HHHHHHHHHCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
AGALTSTPGLAVAIDSTNSPLASIAYGIAYPFGVIGVILFVKLLPKIMRVDLDKEARRLE
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LERRSGFPELTTCIFRVTNQAVFGRTLAQINARAMTGAVISRVKHEDSILMPKANTMLLE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEE
GDYVQAVGSEEALNQFAVLVGEREEGELPLDQTQEIESLLLTKKDMINKQLGDLNLQRNF
CCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GCTVTRIRRSGIDLSPSPDLALKFGDKLMVVGEREGLRGVARLLGNNAKQLSDTDFFPIA
CCHHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCHHHHHHHHHCCCCHHCCCCCCHHHH
MGIVLGVLFGKINISFSDSVSFSPGLTGGVLMVALLLSAVGKTGPILWSMSGPANQLLRQ
HHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHH
LGLLLFLAEVGTSAGKNLVATFQESGLLLFGVGAAITVVPMLVAVVVGRLVFKISLLDLL
HHHHHHHHHHCCCCCCCCEEEHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTITGGMTSTPGLAAADSMVDSNIPSVAYATVYPIAMVFLILFIQVIASAVY
HHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA