Click here to switch to the map view.

The map label for this gene is 150005178

Identifier: 150005178

GI number: 150005178

Start: 3365832

End: 3367976

Strand: Direct

Name: 150005178

Synonym: BVU_2648

Alternate gene names: NA

Gene position: 3365832-3367976 (Clockwise)

Preceding gene: 150005177

Following gene: 150005200

Centisome position: 65.19

GC content: 48.39

Gene sequence:

>2145_bases
ATGAAAAACAAACTTGCCACTTTAGTCGGAGCACTTGCATTGAGTGCTGCCGCCTCCGCCCAGACCTGGATCTGGTATCC
GGGTGATTATGAGATATGGCTGGGCAACCGGATGAACAACCGCCGTACGGAACGCGGTGCTTTTTTCCCTCCCTTCTGGA
AAACGGACAGCCATTATGTGGTAGTGGAATTCAGCAAGAAATTGGACCTGGCGGAACCGGAAGAGATCTTCATTGCCGCC
GAAGGAAAATACAATGTGAAATTGGACGGCAAACTGCAATTCGGTATGCCCTCCACCTTGAAACTCCCCGCAGGAAAACA
CAGTCTGAACATCAAAGTGTGGAATCAGTCCACTCCCCCCACTATTTATGTGAAAGGAAAAACCGTAAATACGGACAAGA
CCTGGAAAGTAACCTACGAAGACAAGGAATGGATAGACGAAAGCGGAAAAGCCAGTGATACTTCTGCCACCGTTTATATG
GATGCAGGGTGTTGGAACTTTGACGGAGCCACCCAACTGCCTTCCAAGTTTTCATTGGCCAGAAAACCGATGAAAGCAGT
TTCCTCCACTCCCCGGAAAGAAGGGGTATTGTACGACTTCGGAAAAGAGACCTTTGGTTATATCACTCTGAAAGAGGTAA
AGGGAAAAGGAACGATCCATATCTATTACGGTGAAAGTCCTGAAGAAGCCTTGGATACGGAATATTGCGAAACATTGGAC
AAATTGCTGGCAGAGCCGGGGCAGATAACCGATCTGGCCATCCGGAATACACGGAAACTATACGATGAATACACGTTGGA
CAACAGCAAGGCCTTCCGTTATGTCTATGTCACTTGCGATCCGGGAGTAACGATACAGGACGTTTCCATGCAATACGAAT
ACCTGCCCGAAGAGTACCGGGGCTCATTCAAATGCAATGACGAAGAGCTGAACCGCATCTGGGAAGTAGGAGCATACACC
ATGCACCTTACTACCCGTGAATTCTTTATCGACGGCATCAAGCGCGACCGTTGGGTATGGAGTGGCGATGCCATCCAGAG
CTACCTGATGAACTACTATCTGTTCTTCGATAATGAAACCGTGAAGCGTACCATCTGGCTGCTTCGCGGAAAAGACCCTG
TGACCAGCCACAGCAATACCATTATGGACTACACCTTCTATTGGTTCCTCAGTATTTACGATTACTATATGTATTCCGGT
GACAAAGACTTTGTAACCCAACTCTATCCGCGTATGCAAAGCATGATGGACTATGTATTGGGACGCACCAATGCCAACGG
TATGGTGGAAGGCATGACCGGTGACTGGGTATTCGTAGACTGGGCAGACGGTTATCTGGACAAGAAAGGCGAACTATCCT
TTGAGCAAGTCTTGTTCTGCAAGAGTTTGGAAACCATGGCGCTTTGTGCCGGTCTGGCCGGCAATACGGCAGACAAAACC
AAGTATGAGAAACTGGCTTCCGCTTTACGTTCCAAGCTGGAACCCGCTTTCTGGAATGAGCAGAAACAGGCGATGGTACA
CAACCGCGTTCAGGGCAAGCAGAGTGAGTCCGTTACCCGCTACGCCAATATGTTCTCTGTCTTCTTCAATTATCTGAATG
CCGATAAACAGCAGACCATCAAACACTCCGTATTGCAGAATGACAGTATTTTGAAAATCACCACTCCTTATATGCGTTTC
TATGAACTGGAAGCACTGTGCGCCTTGGGCGAACAAGAATCGGTGATGAAAGAAATGAAAGCCTATTGGGGCGGTATGTT
GAAAGAAGGAGCTACCAGTTTCTGGGAGAAATACAATCCCGAAGAAACAGGTACCCGGCATCTGGCCATGTACGGACGTC
CATACGGCAAAAGCCTCTGCCATGCATGGGGAGCCAGCCCCATCTATTTGCTGGGCAAATACTATCTGGGAGTAAAACCC
ACCAAACCCGGTTACGAGGAATACTCCGTCACCCCTTGTCTGGGCGGCTTGAAATGGATGGAAGGAACCGTGCCCACTCC
ATACGGCAATATCCATATCTATATGGATAAGAAAGAGATCCGTATCAAGTCCGACGGCGGAAAGGGAGTGCTGAACATTC
CAACCCGGAAAGGAATGAAAGCCATGACCATAGAACCCGGAGAAGAACAAGTCTTCAAATACTAA

Upstream 100 bases:

>100_bases
GGGAAAACAATGGTCCGATGGTGAACGACAGCATCAAGGCAAATGCCGGACTGCCCAAAGAATATAGCTATTTGAAGGAA
AAATAAAACGTGATACCATT

Downstream 100 bases:

>100_bases
TGGAATAGATCAAAAAAAAGGTGATACCTACCTTCCCAGGCGGGTATCACCAACACTGTTTCGTAAGTTCCCGTTATCCG
CTGATAACAGTACTTACCTC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Alfa-L-Rhamnosidase In L-Rhamnose Subsystem; Ricin B Lectin; Alfa-L-Rhamnosidase Homolog; Alpha-L-Rhamnosidase A; Alpha-L-Rhamnosidase N- Domain Protein; Alpha-Rhamnosidase; Rhamnosidase B; Rhamnosidase; Bacterial Alpha-L-Rhamnosidase Family; Alpha-L-Rhamnosidase Domain-Containing Protein

Number of amino acids: Translated: 714; Mature: 714

Protein sequence:

>714_residues
MKNKLATLVGALALSAAASAQTWIWYPGDYEIWLGNRMNNRRTERGAFFPPFWKTDSHYVVVEFSKKLDLAEPEEIFIAA
EGKYNVKLDGKLQFGMPSTLKLPAGKHSLNIKVWNQSTPPTIYVKGKTVNTDKTWKVTYEDKEWIDESGKASDTSATVYM
DAGCWNFDGATQLPSKFSLARKPMKAVSSTPRKEGVLYDFGKETFGYITLKEVKGKGTIHIYYGESPEEALDTEYCETLD
KLLAEPGQITDLAIRNTRKLYDEYTLDNSKAFRYVYVTCDPGVTIQDVSMQYEYLPEEYRGSFKCNDEELNRIWEVGAYT
MHLTTREFFIDGIKRDRWVWSGDAIQSYLMNYYLFFDNETVKRTIWLLRGKDPVTSHSNTIMDYTFYWFLSIYDYYMYSG
DKDFVTQLYPRMQSMMDYVLGRTNANGMVEGMTGDWVFVDWADGYLDKKGELSFEQVLFCKSLETMALCAGLAGNTADKT
KYEKLASALRSKLEPAFWNEQKQAMVHNRVQGKQSESVTRYANMFSVFFNYLNADKQQTIKHSVLQNDSILKITTPYMRF
YELEALCALGEQESVMKEMKAYWGGMLKEGATSFWEKYNPEETGTRHLAMYGRPYGKSLCHAWGASPIYLLGKYYLGVKP
TKPGYEEYSVTPCLGGLKWMEGTVPTPYGNIHIYMDKKEIRIKSDGGKGVLNIPTRKGMKAMTIEPGEEQVFKY

Sequences:

>Translated_714_residues
MKNKLATLVGALALSAAASAQTWIWYPGDYEIWLGNRMNNRRTERGAFFPPFWKTDSHYVVVEFSKKLDLAEPEEIFIAA
EGKYNVKLDGKLQFGMPSTLKLPAGKHSLNIKVWNQSTPPTIYVKGKTVNTDKTWKVTYEDKEWIDESGKASDTSATVYM
DAGCWNFDGATQLPSKFSLARKPMKAVSSTPRKEGVLYDFGKETFGYITLKEVKGKGTIHIYYGESPEEALDTEYCETLD
KLLAEPGQITDLAIRNTRKLYDEYTLDNSKAFRYVYVTCDPGVTIQDVSMQYEYLPEEYRGSFKCNDEELNRIWEVGAYT
MHLTTREFFIDGIKRDRWVWSGDAIQSYLMNYYLFFDNETVKRTIWLLRGKDPVTSHSNTIMDYTFYWFLSIYDYYMYSG
DKDFVTQLYPRMQSMMDYVLGRTNANGMVEGMTGDWVFVDWADGYLDKKGELSFEQVLFCKSLETMALCAGLAGNTADKT
KYEKLASALRSKLEPAFWNEQKQAMVHNRVQGKQSESVTRYANMFSVFFNYLNADKQQTIKHSVLQNDSILKITTPYMRF
YELEALCALGEQESVMKEMKAYWGGMLKEGATSFWEKYNPEETGTRHLAMYGRPYGKSLCHAWGASPIYLLGKYYLGVKP
TKPGYEEYSVTPCLGGLKWMEGTVPTPYGNIHIYMDKKEIRIKSDGGKGVLNIPTRKGMKAMTIEPGEEQVFKY
>Mature_714_residues
MKNKLATLVGALALSAAASAQTWIWYPGDYEIWLGNRMNNRRTERGAFFPPFWKTDSHYVVVEFSKKLDLAEPEEIFIAA
EGKYNVKLDGKLQFGMPSTLKLPAGKHSLNIKVWNQSTPPTIYVKGKTVNTDKTWKVTYEDKEWIDESGKASDTSATVYM
DAGCWNFDGATQLPSKFSLARKPMKAVSSTPRKEGVLYDFGKETFGYITLKEVKGKGTIHIYYGESPEEALDTEYCETLD
KLLAEPGQITDLAIRNTRKLYDEYTLDNSKAFRYVYVTCDPGVTIQDVSMQYEYLPEEYRGSFKCNDEELNRIWEVGAYT
MHLTTREFFIDGIKRDRWVWSGDAIQSYLMNYYLFFDNETVKRTIWLLRGKDPVTSHSNTIMDYTFYWFLSIYDYYMYSG
DKDFVTQLYPRMQSMMDYVLGRTNANGMVEGMTGDWVFVDWADGYLDKKGELSFEQVLFCKSLETMALCAGLAGNTADKT
KYEKLASALRSKLEPAFWNEQKQAMVHNRVQGKQSESVTRYANMFSVFFNYLNADKQQTIKHSVLQNDSILKITTPYMRF
YELEALCALGEQESVMKEMKAYWGGMLKEGATSFWEKYNPEETGTRHLAMYGRPYGKSLCHAWGASPIYLLGKYYLGVKP
TKPGYEEYSVTPCLGGLKWMEGTVPTPYGNIHIYMDKKEIRIKSDGGKGVLNIPTRKGMKAMTIEPGEEQVFKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82007; Mature: 82007

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKLATLVGALALSAAASAQTWIWYPGDYEIWLGNRMNNRRTERGAFFPPFWKTDSHYV
CCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
VVEFSKKLDLAEPEEIFIAAEGKYNVKLDGKLQFGMPSTLKLPAGKHSLNIKVWNQSTPP
EEEECCCCCCCCCCEEEEEECCEEEEEECCEEEECCCCCEECCCCCCEEEEEEECCCCCC
TIYVKGKTVNTDKTWKVTYEDKEWIDESGKASDTSATVYMDAGCWNFDGATQLPSKFSLA
EEEEECEEECCCCEEEEEECCHHHHCCCCCCCCCCEEEEEECCEECCCCCCCCCHHHHHH
RKPMKAVSSTPRKEGVLYDFGKETFGYITLKEVKGKGTIHIYYGESPEEALDTEYCETLD
HHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHH
KLLAEPGQITDLAIRNTRKLYDEYTLDNSKAFRYVYVTCDPGVTIQDVSMQYEYLPEEYR
HHHCCCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCEEECCHHHC
GSFKCNDEELNRIWEVGAYTMHLTTREFFIDGIKRDRWVWSGDAIQSYLMNYYLFFDNET
CCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCEEECHHHHHHHHHEEEEEECCCC
VKRTIWLLRGKDPVTSHSNTIMDYTFYWFLSIYDYYMYSGDKDFVTQLYPRMQSMMDYVL
EEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GRTNANGMVEGMTGDWVFVDWADGYLDKKGELSFEQVLFCKSLETMALCAGLAGNTADKT
CCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
KYEKLASALRSKLEPAFWNEQKQAMVHNRVQGKQSESVTRYANMFSVFFNYLNADKQQTI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
KHSVLQNDSILKITTPYMRFYELEALCALGEQESVMKEMKAYWGGMLKEGATSFWEKYNP
HHHHHCCCCEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
EETGTRHLAMYGRPYGKSLCHAWGASPIYLLGKYYLGVKPTKPGYEEYSVTPCLGGLKWM
CCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCEECCHHHCCCHHH
EGTVPTPYGNIHIYMDKKEIRIKSDGGKGVLNIPTRKGMKAMTIEPGEEQVFKY
CCCCCCCCCCEEEEECCCEEEEECCCCCEEEECCCCCCCEEEEECCCHHHHCCC
>Mature Secondary Structure
MKNKLATLVGALALSAAASAQTWIWYPGDYEIWLGNRMNNRRTERGAFFPPFWKTDSHYV
CCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
VVEFSKKLDLAEPEEIFIAAEGKYNVKLDGKLQFGMPSTLKLPAGKHSLNIKVWNQSTPP
EEEECCCCCCCCCCEEEEEECCEEEEEECCEEEECCCCCEECCCCCCEEEEEEECCCCCC
TIYVKGKTVNTDKTWKVTYEDKEWIDESGKASDTSATVYMDAGCWNFDGATQLPSKFSLA
EEEEECEEECCCCEEEEEECCHHHHCCCCCCCCCCEEEEEECCEECCCCCCCCCHHHHHH
RKPMKAVSSTPRKEGVLYDFGKETFGYITLKEVKGKGTIHIYYGESPEEALDTEYCETLD
HHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHH
KLLAEPGQITDLAIRNTRKLYDEYTLDNSKAFRYVYVTCDPGVTIQDVSMQYEYLPEEYR
HHHCCCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCEEECCHHHC
GSFKCNDEELNRIWEVGAYTMHLTTREFFIDGIKRDRWVWSGDAIQSYLMNYYLFFDNET
CCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCEEECHHHHHHHHHEEEEEECCCC
VKRTIWLLRGKDPVTSHSNTIMDYTFYWFLSIYDYYMYSGDKDFVTQLYPRMQSMMDYVL
EEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GRTNANGMVEGMTGDWVFVDWADGYLDKKGELSFEQVLFCKSLETMALCAGLAGNTADKT
CCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
KYEKLASALRSKLEPAFWNEQKQAMVHNRVQGKQSESVTRYANMFSVFFNYLNADKQQTI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
KHSVLQNDSILKITTPYMRFYELEALCALGEQESVMKEMKAYWGGMLKEGATSFWEKYNP
HHHHHCCCCEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
EETGTRHLAMYGRPYGKSLCHAWGASPIYLLGKYYLGVKPTKPGYEEYSVTPCLGGLKWM
CCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCEECCHHHCCCHHH
EGTVPTPYGNIHIYMDKKEIRIKSDGGKGVLNIPTRKGMKAMTIEPGEEQVFKY
CCCCCCCCCCEEEEECCCEEEEECCCCCEEEECCCCCCCEEEEECCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA