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The map label for this gene is arnC [H]

Identifier: 150005165

GI number: 150005165

Start: 3343664

End: 3344617

Strand: Reverse

Name: arnC [H]

Synonym: BVU_2634

Alternate gene names: 150005165

Gene position: 3344617-3343664 (Counterclockwise)

Preceding gene: 150005166

Following gene: 150005164

Centisome position: 64.78

GC content: 42.45

Gene sequence:

>954_bases
ATGGATATATCTGTAGTTATTCCTTTGTATAACGAAGAAGAATCTTTGCCGGAACTATTCGCATGGATTCAACGTGTAAT
GGATGCCAACCACTTCAGCTATGAAGTAATTTTTGTCAATGACGGCAGCACCGACCACTCCTGGCAAGTGATAGAGAAAC
TACGCTCGGAGTCGGACAACGTAAAAGGTATCAAATTCCGCCGGAACTACGGCAAGTCCCCTGCCTTGTATTGTGGTTTT
GAAAAGGCGCAAGGTGATGTGGTGATTACAATGGATGCCGACTTGCAGGACAGCCCGGACGAAATACCGGAATTATACAG
AATGATTACAGAAGATGGCTACGACTTAGTATCGGGATACAAGCAAAAACGCTATGACCCGTTATCAAAAACCATTCCGA
CCAAACTATTCAACGCCACAGCACGTGCCGTTTCAGGCATCAAGAACCTGCACGACTTCAACTGCGGACTAAAAGCTTAT
CGTCGTGATGTCGTAAAGAACATCGAAGTATACGGTGAAATGCACCGCTATATCCCCTATCTGGCAAAGAATGCAGGTTT
TCCTAAGATAGCCGAGAAGGTAGTACACCATCAGGCACGAAAATTCGGTAAAACAAAATTCGGCGGATTAAACCGTTTCT
TCAATGGTTATCTAGACCTCATTACTCTGTGGTTTTTATCCAAATTCGGTATCAAGCCGATGCACTTCTTCGGGTTTATG
GGATCATTGATGTTTATTCTTGGTTTCATTTCCGTCATTATCATCGGAGCGAACAAACTATATGCCTTGTCACATGGTTT
ACCTTATATATTAATTACTGATTCTCCTTACTTCTATCTGGCCCTAACTTTGATGATTTTGGGGACCCAACTGTTTCTGG
CAGGATTCATAGGAGAATTGATAGCCCGGAATGCTCCTGAACGCAATAATTATAAAATAGAGAAAGAGTTTTAA

Upstream 100 bases:

>100_bases
AATGACATTTCAACTGATATCACAAAATATGTTTTACGGGATGCTAATGGCCATCCCTACGGCATTGATCGTGATGCGTA
AAAAGAAAAATGAATAAAAG

Downstream 100 bases:

>100_bases
AATGAAGAAACTACCAGCCATTATCTTATTGCTCCTGATTACCGTAAGCACCTTGATGCAAAGCTGTGGGGAAAGCGATT
GTCCGCTTACCACCAATTCC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MDISVVIPLYNEEESLPELFAWIQRVMDANHFSYEVIFVNDGSTDHSWQVIEKLRSESDNVKGIKFRRNYGKSPALYCGF
EKAQGDVVITMDADLQDSPDEIPELYRMITEDGYDLVSGYKQKRYDPLSKTIPTKLFNATARAVSGIKNLHDFNCGLKAY
RRDVVKNIEVYGEMHRYIPYLAKNAGFPKIAEKVVHHQARKFGKTKFGGLNRFFNGYLDLITLWFLSKFGIKPMHFFGFM
GSLMFILGFISVIIIGANKLYALSHGLPYILITDSPYFYLALTLMILGTQLFLAGFIGELIARNAPERNNYKIEKEF

Sequences:

>Translated_317_residues
MDISVVIPLYNEEESLPELFAWIQRVMDANHFSYEVIFVNDGSTDHSWQVIEKLRSESDNVKGIKFRRNYGKSPALYCGF
EKAQGDVVITMDADLQDSPDEIPELYRMITEDGYDLVSGYKQKRYDPLSKTIPTKLFNATARAVSGIKNLHDFNCGLKAY
RRDVVKNIEVYGEMHRYIPYLAKNAGFPKIAEKVVHHQARKFGKTKFGGLNRFFNGYLDLITLWFLSKFGIKPMHFFGFM
GSLMFILGFISVIIIGANKLYALSHGLPYILITDSPYFYLALTLMILGTQLFLAGFIGELIARNAPERNNYKIEKEF
>Mature_317_residues
MDISVVIPLYNEEESLPELFAWIQRVMDANHFSYEVIFVNDGSTDHSWQVIEKLRSESDNVKGIKFRRNYGKSPALYCGF
EKAQGDVVITMDADLQDSPDEIPELYRMITEDGYDLVSGYKQKRYDPLSKTIPTKLFNATARAVSGIKNLHDFNCGLKAY
RRDVVKNIEVYGEMHRYIPYLAKNAGFPKIAEKVVHHQARKFGKTKFGGLNRFFNGYLDLITLWFLSKFGIKPMHFFGFM
GSLMFILGFISVIIIGANKLYALSHGLPYILITDSPYFYLALTLMILGTQLFLAGFIGELIARNAPERNNYKIEKEF

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=230, Percent_Identity=27.3913043478261, Blast_Score=75, Evalue=9e-14,
Organism=Escherichia coli, GI1788588, Length=303, Percent_Identity=33.3333333333333, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1788692, Length=326, Percent_Identity=29.7546012269939, Blast_Score=113, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71999402, Length=218, Percent_Identity=29.3577981651376, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6325441, Length=154, Percent_Identity=29.8701298701299, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585265, Length=217, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36345; Mature: 36345

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISVVIPLYNEEESLPELFAWIQRVMDANHFSYEVIFVNDGSTDHSWQVIEKLRSESDN
CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCC
VKGIKFRRNYGKSPALYCGFEKAQGDVVITMDADLQDSPDEIPELYRMITEDGYDLVSGY
CCCEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHH
KQKRYDPLSKTIPTKLFNATARAVSGIKNLHDFNCGLKAYRRDVVKNIEVYGEMHRYIPY
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAKNAGFPKIAEKVVHHQARKFGKTKFGGLNRFFNGYLDLITLWFLSKFGIKPMHFFGFM
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GSLMFILGFISVIIIGANKLYALSHGLPYILITDSPYFYLALTLMILGTQLFLAGFIGEL
HHHHHHHHHHHHHHHCCCHHEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
IARNAPERNNYKIEKEF
HHCCCCCCCCEEEECCC
>Mature Secondary Structure
MDISVVIPLYNEEESLPELFAWIQRVMDANHFSYEVIFVNDGSTDHSWQVIEKLRSESDN
CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCC
VKGIKFRRNYGKSPALYCGFEKAQGDVVITMDADLQDSPDEIPELYRMITEDGYDLVSGY
CCCEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHH
KQKRYDPLSKTIPTKLFNATARAVSGIKNLHDFNCGLKAYRRDVVKNIEVYGEMHRYIPY
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAKNAGFPKIAEKVVHHQARKFGKTKFGGLNRFFNGYLDLITLWFLSKFGIKPMHFFGFM
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GSLMFILGFISVIIIGANKLYALSHGLPYILITDSPYFYLALTLMILGTQLFLAGFIGEL
HHHHHHHHHHHHHHHCCCHHEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
IARNAPERNNYKIEKEF
HHCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA