| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yehU [H]
Identifier: 150005122
GI number: 150005122
Start: 3302171
End: 3303208
Strand: Reverse
Name: yehU [H]
Synonym: BVU_2589
Alternate gene names: 150005122
Gene position: 3303208-3302171 (Counterclockwise)
Preceding gene: 150005123
Following gene: 150005121
Centisome position: 63.98
GC content: 36.22
Gene sequence:
>1038_bases ATGCAAAATAAATACAATCAATTCTTCAACTTTTTCCTGTTTTCAGGGCTGGCATGTTTCTCATACCTTTCGCTGGTACT ATATACCGACCTTACGCCTCAACATCAGAAAATATTAATCTCCTCTTTGGGATTTATTTCTGTGGTGTTCATATTCAATC TGGTAGGCTTCAGTCTGATAGTCATCAACCGGTGGCTGAAAAAAAGCTCTCTATTCTTTATCAAGAAGAGAAACAAGCTG ATTATCAACTGCATTTTGATTGCAGCTATTCTTTTCTTCATGAATTACGCTACTCTGACCATCTGTAAAGTATTGCTGGA ACTGCCTTTCCCATTTGTACTGAGCAGTCCGGGTCTGCGCTTGATCATGATTATATGGTTGGTAGAAATTGTGATTGTGA GTTTAAGTATCACGAGCGCTTTTTACAGGCAGCTGGTTATTCTGCATGAAAAAACAACCAAGCTGGAAGAAAGTTCCATC AAAGCGCAATACACGGCTTTACAAAATCAATTAAATCCACATTTCCTGTTCAATAGTTTGAATACTTTAATATCCGAAAT AGAATATAATCCGGAAAACGCAGTAGTTTTTACACAAAAGCTATCAGATGTTTACCGTTATATCCTAAAAAGTCAGGAAC AAGGACTTGTCACTTTACGTGATGAACTGGAATTTCTGGATTCATATATCTATCTGCATCAAGTGCGTCTGGGAAAATGC ATTCAACTGGAAAACAAAATGACCCCCACGTTATTGAACAAGAAAATCCCTTCATTAACCCTACAGTTACTTATCGAAAA CGTGATAAAACATAACATCATCAATATGGAAAATCCAATGGTCATCCATTTGGATTATTCTGACAAAGATCAAACTCTTT CCGTAAGAAACAAGATCAAATTAAAAAAGGATGTTGCAAAATCAGGAATGGGACTGAAGAACTTATCTGCCCGCTATCTG CTGATTTGCAACTTGCATATCACAATTATTGACGATTCTGAATATTTCACCGTAAAAATACCTTTACTGAATGAATAA
Upstream 100 bases:
>100_bases AAAAGAGGAGATTTGGAAAGTATTCTATTCTTTTCTGAATTTCCTCTTTTTTTCATATTTTTGTAAAATAACCCAAATCA TTTTCAACAGCGGAATGGCT
Downstream 100 bases:
>100_bases GATAAAAGCCGCTATTATAGAAGATGAAATTCCTGCAGGACGCCTGCTACATAAAATGTTGTCAGGATTAAGGCCAGACT GGGATATAGTTGTATTGCCC
Product: putative two-component system sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MQNKYNQFFNFFLFSGLACFSYLSLVLYTDLTPQHQKILISSLGFISVVFIFNLVGFSLIVINRWLKKSSLFFIKKRNKL IINCILIAAILFFMNYATLTICKVLLELPFPFVLSSPGLRLIMIIWLVEIVIVSLSITSAFYRQLVILHEKTTKLEESSI KAQYTALQNQLNPHFLFNSLNTLISEIEYNPENAVVFTQKLSDVYRYILKSQEQGLVTLRDELEFLDSYIYLHQVRLGKC IQLENKMTPTLLNKKIPSLTLQLLIENVIKHNIINMENPMVIHLDYSDKDQTLSVRNKIKLKKDVAKSGMGLKNLSARYL LICNLHITIIDDSEYFTVKIPLLNE
Sequences:
>Translated_345_residues MQNKYNQFFNFFLFSGLACFSYLSLVLYTDLTPQHQKILISSLGFISVVFIFNLVGFSLIVINRWLKKSSLFFIKKRNKL IINCILIAAILFFMNYATLTICKVLLELPFPFVLSSPGLRLIMIIWLVEIVIVSLSITSAFYRQLVILHEKTTKLEESSI KAQYTALQNQLNPHFLFNSLNTLISEIEYNPENAVVFTQKLSDVYRYILKSQEQGLVTLRDELEFLDSYIYLHQVRLGKC IQLENKMTPTLLNKKIPSLTLQLLIENVIKHNIINMENPMVIHLDYSDKDQTLSVRNKIKLKKDVAKSGMGLKNLSARYL LICNLHITIIDDSEYFTVKIPLLNE >Mature_345_residues MQNKYNQFFNFFLFSGLACFSYLSLVLYTDLTPQHQKILISSLGFISVVFIFNLVGFSLIVINRWLKKSSLFFIKKRNKL IINCILIAAILFFMNYATLTICKVLLELPFPFVLSSPGLRLIMIIWLVEIVIVSLSITSAFYRQLVILHEKTTKLEESSI KAQYTALQNQLNPHFLFNSLNTLISEIEYNPENAVVFTQKLSDVYRYILKSQEQGLVTLRDELEFLDSYIYLHQVRLGKC IQLENKMTPTLLNKKIPSLTLQLLIENVIKHNIINMENPMVIHLDYSDKDQTLSVRNKIKLKKDVAKSGMGLKNLSARYL LICNLHITIIDDSEYFTVKIPLLNE
Specific function: Unknown
COG id: COG3275
COG function: function code T; Putative regulator of cell autolysis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788446, Length=217, Percent_Identity=27.6497695852535, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788723, Length=167, Percent_Identity=30.5389221556886, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR010559 - InterPro: IPR011620 [H]
Pfam domain/function: PF07694 5TM-5TMR_LYT; PF02518 HATPase_c; PF06580 His_kinase [H]
EC number: NA
Molecular weight: Translated: 39963; Mature: 39963
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNKYNQFFNFFLFSGLACFSYLSLVLYTDLTPQHQKILISSLGFISVVFIFNLVGFSLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VINRWLKKSSLFFIKKRNKLIINCILIAAILFFMNYATLTICKVLLELPFPFVLSSPGLR HHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHH LIMIIWLVEIVIVSLSITSAFYRQLVILHEKTTKLEESSIKAQYTALQNQLNPHFLFNSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH NTLISEIEYNPENAVVFTQKLSDVYRYILKSQEQGLVTLRDELEFLDSYIYLHQVRLGKC HHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC IQLENKMTPTLLNKKIPSLTLQLLIENVIKHNIINMENPMVIHLDYSDKDQTLSVRNKIK EEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEHHHHHHH LKKDVAKSGMGLKNLSARYLLICNLHITIIDDSEYFTVKIPLLNE HHHHHHHCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEECCC >Mature Secondary Structure MQNKYNQFFNFFLFSGLACFSYLSLVLYTDLTPQHQKILISSLGFISVVFIFNLVGFSLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VINRWLKKSSLFFIKKRNKLIINCILIAAILFFMNYATLTICKVLLELPFPFVLSSPGLR HHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHH LIMIIWLVEIVIVSLSITSAFYRQLVILHEKTTKLEESSIKAQYTALQNQLNPHFLFNSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH NTLISEIEYNPENAVVFTQKLSDVYRYILKSQEQGLVTLRDELEFLDSYIYLHQVRLGKC HHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC IQLENKMTPTLLNKKIPSLTLQLLIENVIKHNIINMENPMVIHLDYSDKDQTLSVRNKIK EEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEHHHHHHH LKKDVAKSGMGLKNLSARYLLICNLHITIIDDSEYFTVKIPLLNE HHHHHHHCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]