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The map label for this gene is yfjD [C]

Identifier: 150005096

GI number: 150005096

Start: 3269448

End: 3270707

Strand: Reverse

Name: yfjD [C]

Synonym: BVU_2561

Alternate gene names: 150005096

Gene position: 3270707-3269448 (Counterclockwise)

Preceding gene: 150005097

Following gene: 150005095

Centisome position: 63.35

GC content: 36.35

Gene sequence:

>1260_bases
ATGGGTATTATTATACAAATTCTTATCACAATGGCTTTTTCCGCTTTTTTCTCCGGCATGGAAATAGCCTTTGTTTCATC
CAATAAATTACGTTTTGAAATGGATCGTAACAGCCAAAGCATAAATTCACGTATACTTTCCATCTTCTTTCATAATCCGA
ACAATTTTATCTCTACCATGTTGGTAGGGAACAACATCGCTTTGGTCATTTACGGTATATTGATGGCACAAGTCATTGAA
CAAAACTTGCTGGCAGGATTGATAGACAACCACTTTTTATTAGTACTGATCCAAACAATTATTTCCACATTAATCATCTT
GGTCACAGGAGAGTTCCTTCCTAAAACCTTATTTAAGATTAATCCCAATTTCACTCTGAATATTTTTGCAGTTCCCACTT
ACATTTGCTATGTCTTGCTCTATCCCATCAGCAAGTTTGCTTCGGGAATATCCAATATATTACTTTACATAATAGGCATT
AAAACAAATAAAGAAGCCAATGAAAAAGCTTTTACCAAAGTCGATCTAGATTACTTTATTCAAAGCAGTATACAAGATGT
TCAAAATGAACAAGACATAGACACCGAAGTCAAGATATTCCAAAATGCACTAGATTTTTCGAATATCAGAATTAGGGATT
GTATGGTACCCAGAACCGAAATTGTTGCCATAGAATATGGAACTCCCATAGAAGAACTAAAAGCCCGCTTCATTGAAAGC
GGAATCAGTAAAATCATTGTCTATAAAGAAAACATTGACAATATTATAGGTTATATCCATTCTTCTGAAATGTTTCGTGA
ACAGACCGACTGGACTAAGAGTGTACGCCAACTACCTATTGCTCCCGAAACGATGGGAGCGCATAAGCTGATGAAACTAT
TCATGCAGCAAAAGAAATCCTTAGCTGTAGTAGTCGATGAATTCGGAGGTACATCCGGCATCGTGGCGCTAGAAGATTTA
GTGGAAGAAATTTTCGGTGAAATAGAAGACGAGCATGACACGACTTCTTACATAGCCAAATCTGTCGGTGACAATGAATA
CATCCTTTCCGGACGTCTGGAAATCGAAAAAGTCAATGAATTGTTCTCACTTGACCTACCGGAAAATGATGATTACCAAA
CTATCGGTGGACTCATCCTGCACCAATACCAAAGCTTCCCCAAAATACATGAAGAGATCACTTTCGATAAATTCCATTTC
AAAATAATTAAAGTAACAGCAACCAAAATTGAATTAGTAAAGTTGAAAGTAACCGAATAA

Upstream 100 bases:

>100_bases
ACAGGTATTTTCACTGTAGAAGATACAGCACCAGCAGACAGTACAAAAGCTGTTGCAAATAGCACCAGAACTGATTCGAT
ACGCTAATTCACTCACTATT

Downstream 100 bases:

>100_bases
TAGATTTTTTTCACAATAAAATAGCTTGTAAGCTGCATTTTTTGTATCTTCGTGCGCTAAATCTATGAAGTATAAAAAAA
CAATAAACAAAAATAGTAAA

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MGIIIQILITMAFSAFFSGMEIAFVSSNKLRFEMDRNSQSINSRILSIFFHNPNNFISTMLVGNNIALVIYGILMAQVIE
QNLLAGLIDNHFLLVLIQTIISTLIILVTGEFLPKTLFKINPNFTLNIFAVPTYICYVLLYPISKFASGISNILLYIIGI
KTNKEANEKAFTKVDLDYFIQSSIQDVQNEQDIDTEVKIFQNALDFSNIRIRDCMVPRTEIVAIEYGTPIEELKARFIES
GISKIIVYKENIDNIIGYIHSSEMFREQTDWTKSVRQLPIAPETMGAHKLMKLFMQQKKSLAVVVDEFGGTSGIVALEDL
VEEIFGEIEDEHDTTSYIAKSVGDNEYILSGRLEIEKVNELFSLDLPENDDYQTIGGLILHQYQSFPKIHEEITFDKFHF
KIIKVTATKIELVKLKVTE

Sequences:

>Translated_419_residues
MGIIIQILITMAFSAFFSGMEIAFVSSNKLRFEMDRNSQSINSRILSIFFHNPNNFISTMLVGNNIALVIYGILMAQVIE
QNLLAGLIDNHFLLVLIQTIISTLIILVTGEFLPKTLFKINPNFTLNIFAVPTYICYVLLYPISKFASGISNILLYIIGI
KTNKEANEKAFTKVDLDYFIQSSIQDVQNEQDIDTEVKIFQNALDFSNIRIRDCMVPRTEIVAIEYGTPIEELKARFIES
GISKIIVYKENIDNIIGYIHSSEMFREQTDWTKSVRQLPIAPETMGAHKLMKLFMQQKKSLAVVVDEFGGTSGIVALEDL
VEEIFGEIEDEHDTTSYIAKSVGDNEYILSGRLEIEKVNELFSLDLPENDDYQTIGGLILHQYQSFPKIHEEITFDKFHF
KIIKVTATKIELVKLKVTE
>Mature_418_residues
GIIIQILITMAFSAFFSGMEIAFVSSNKLRFEMDRNSQSINSRILSIFFHNPNNFISTMLVGNNIALVIYGILMAQVIEQ
NLLAGLIDNHFLLVLIQTIISTLIILVTGEFLPKTLFKINPNFTLNIFAVPTYICYVLLYPISKFASGISNILLYIIGIK
TNKEANEKAFTKVDLDYFIQSSIQDVQNEQDIDTEVKIFQNALDFSNIRIRDCMVPRTEIVAIEYGTPIEELKARFIESG
ISKIIVYKENIDNIIGYIHSSEMFREQTDWTKSVRQLPIAPETMGAHKLMKLFMQQKKSLAVVVDEFGGTSGIVALEDLV
EEIFGEIEDEHDTTSYIAKSVGDNEYILSGRLEIEKVNELFSLDLPENDDYQTIGGLILHQYQSFPKIHEEITFDKFHFK
IIKVTATKIELVKLKVTE

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=384, Percent_Identity=25, Blast_Score=113, Evalue=3e-25,
Organism=Escherichia coli, GI145693175, Length=418, Percent_Identity=24.8803827751196, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1790664, Length=424, Percent_Identity=21.6981132075472, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1786879, Length=244, Percent_Identity=29.0983606557377, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI87082033, Length=251, Percent_Identity=25.0996015936255, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1788119, Length=226, Percent_Identity=24.3362831858407, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47673; Mature: 47542

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIIIQILITMAFSAFFSGMEIAFVSSNKLRFEMDRNSQSINSRILSIFFHNPNNFISTM
CCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCHHHHHEEEEEEEECCCHHEEHE
LVGNNIALVIYGILMAQVIEQNLLAGLIDNHFLLVLIQTIISTLIILVTGEFLPKTLFKI
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHEEE
NPNFTLNIFAVPTYICYVLLYPISKFASGISNILLYIIGIKTNKEANEKAFTKVDLDYFI
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHEECHHHHH
QSSIQDVQNEQDIDTEVKIFQNALDFSNIRIRDCMVPRTEIVAIEYGTPIEELKARFIES
HHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHC
GISKIIVYKENIDNIIGYIHSSEMFREQTDWTKSVRQLPIAPETMGAHKLMKLFMQQKKS
CHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
LAVVVDEFGGTSGIVALEDLVEEIFGEIEDEHDTTSYIAKSVGDNEYILSGRLEIEKVNE
EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCEEHHHHHH
LFSLDLPENDDYQTIGGLILHQYQSFPKIHEEITFDKFHFKIIKVTATKIELVKLKVTE
HHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCEEEEEEEEEEEEEEEEEEEEEEECC
>Mature Secondary Structure 
GIIIQILITMAFSAFFSGMEIAFVSSNKLRFEMDRNSQSINSRILSIFFHNPNNFISTM
CHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCHHHHHEEEEEEEECCCHHEEHE
LVGNNIALVIYGILMAQVIEQNLLAGLIDNHFLLVLIQTIISTLIILVTGEFLPKTLFKI
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHEEE
NPNFTLNIFAVPTYICYVLLYPISKFASGISNILLYIIGIKTNKEANEKAFTKVDLDYFI
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHEECHHHHH
QSSIQDVQNEQDIDTEVKIFQNALDFSNIRIRDCMVPRTEIVAIEYGTPIEELKARFIES
HHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHC
GISKIIVYKENIDNIIGYIHSSEMFREQTDWTKSVRQLPIAPETMGAHKLMKLFMQQKKS
CHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
LAVVVDEFGGTSGIVALEDLVEEIFGEIEDEHDTTSYIAKSVGDNEYILSGRLEIEKVNE
EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCEEHHHHHH
LFSLDLPENDDYQTIGGLILHQYQSFPKIHEEITFDKFHFKIIKVTATKIELVKLKVTE
HHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCEEEEEEEEEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]