| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is aroC
Identifier: 150005072
GI number: 150005072
Start: 3240077
End: 3241153
Strand: Reverse
Name: aroC
Synonym: BVU_2537
Alternate gene names: 150005072
Gene position: 3241153-3240077 (Counterclockwise)
Preceding gene: 150005073
Following gene: 150005071
Centisome position: 62.77
GC content: 45.59
Gene sequence:
>1077_bases ATGTTCAATTCATTTGGTAATATTTTCCGGTTAACCAGTTTCGGTGAATCCCATGGACCGGGAGTAGGCGGCGTCATTGA CGGCTTCCCTGCCGGTATTAAGATTGATATGGATTTCGTTCAGCAGGAACTGAACCGCCGCCGTCCCGGACAGTCATTAC TTACCACCAGCCGCAAGGAGCCTGATACAGTGGAATTCCTTTCAGGTATATTCGAAGGCAAGTCCACCGGCTGCCCCATC GGATTTGTGGTATGGAACAAGAACCAACATTCAAACGACTACGAGAATATCAAGAATCTGTTCCGCCCTTCACACGCAGA TTATACTTATATGCAAAAATACGGAATCCGTGACTACCGTGGCGGGGGACGTTCATCAGCACGAGAAACCATTTCACGTG TAGTAGCAGGAGCTTTAGCCAAATTGGCATTGAAACAACTAGGAATCAGTGTCACAGCTTATACCTCACAGGTAGGACCT GTCAAACTTGATAAAGATTACAAAAGCTATAACCTCGACTTGATAGAAACAAACGATGTGCGTTGTCCCGATCCGGAAAA AGCCAAGGAAATGGCAGAACTTATCTGGAAAATCAAAGGAGAAGGCGATACAATAGGCGGGGTAGTGAGTTGCGTCATCA AAGGATGCCCTATCGGACTAGGGCAACCCGTATTCGGTAAGTTACATGCCGCACTAGGAAATGCCATGTTAAGTATCAAT GCCGTAAAAGGTTTCTCTTACGGACAAGGTTTTGACTCCATGGAGCTAAAAGGCAGTGAGCAGAATGATGTATTTTATAA TAATAACGGAAGAGTAGAAACAAAAAGTAATTATTCCGGAGGAATACAAGGAGGCATCAGCAACGGGCAAGACATTTACT TCCGTGTGGCATTCAAGCCAGTTGCCACAATTCTGATGGAGCAACATACAGTAAATATCAACGGCACAGACACGACCATG AAAGCCAAAGGGCGTCATGATGCCTGCGTACTGCCGCGTGCCGTCCCCATTGTAGAAGCCATGGCTGCCATGACCATTTT GGATTATTATCTGATAGACAGAACTACACAACTATAA
Upstream 100 bases:
>100_bases CCCATTTTTATCCATTCTGCTAATTTTTCAGCAACAATCAAGTATATTATCCCTAAAATCATTATCTTTACGGAAAGAAA CTTTTAAAACTACAAGCAAT
Downstream 100 bases:
>100_bases GAATCATTCAATTATGGAAATAAAACAATACATTAAAGAAAATGAAGCACGCTTCATGGAGGAACTTTTCAGCCTCATCC GTATTCCCAGTATCAGTGCT
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MFNSFGNIFRLTSFGESHGPGVGGVIDGFPAGIKIDMDFVQQELNRRRPGQSLLTTSRKEPDTVEFLSGIFEGKSTGCPI GFVVWNKNQHSNDYENIKNLFRPSHADYTYMQKYGIRDYRGGGRSSARETISRVVAGALAKLALKQLGISVTAYTSQVGP VKLDKDYKSYNLDLIETNDVRCPDPEKAKEMAELIWKIKGEGDTIGGVVSCVIKGCPIGLGQPVFGKLHAALGNAMLSIN AVKGFSYGQGFDSMELKGSEQNDVFYNNNGRVETKSNYSGGIQGGISNGQDIYFRVAFKPVATILMEQHTVNINGTDTTM KAKGRHDACVLPRAVPIVEAMAAMTILDYYLIDRTTQL
Sequences:
>Translated_358_residues MFNSFGNIFRLTSFGESHGPGVGGVIDGFPAGIKIDMDFVQQELNRRRPGQSLLTTSRKEPDTVEFLSGIFEGKSTGCPI GFVVWNKNQHSNDYENIKNLFRPSHADYTYMQKYGIRDYRGGGRSSARETISRVVAGALAKLALKQLGISVTAYTSQVGP VKLDKDYKSYNLDLIETNDVRCPDPEKAKEMAELIWKIKGEGDTIGGVVSCVIKGCPIGLGQPVFGKLHAALGNAMLSIN AVKGFSYGQGFDSMELKGSEQNDVFYNNNGRVETKSNYSGGIQGGISNGQDIYFRVAFKPVATILMEQHTVNINGTDTTM KAKGRHDACVLPRAVPIVEAMAAMTILDYYLIDRTTQL >Mature_358_residues MFNSFGNIFRLTSFGESHGPGVGGVIDGFPAGIKIDMDFVQQELNRRRPGQSLLTTSRKEPDTVEFLSGIFEGKSTGCPI GFVVWNKNQHSNDYENIKNLFRPSHADYTYMQKYGIRDYRGGGRSSARETISRVVAGALAKLALKQLGISVTAYTSQVGP VKLDKDYKSYNLDLIETNDVRCPDPEKAKEMAELIWKIKGEGDTIGGVVSCVIKGCPIGLGQPVFGKLHAALGNAMLSIN AVKGFSYGQGFDSMELKGSEQNDVFYNNNGRVETKSNYSGGIQGGISNGQDIYFRVAFKPVATILMEQHTVNINGTDTTM KAKGRHDACVLPRAVPIVEAMAAMTILDYYLIDRTTQL
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=354, Percent_Identity=49.1525423728814, Blast_Score=323, Evalue=9e-90, Organism=Saccharomyces cerevisiae, GI6321290, Length=366, Percent_Identity=46.7213114754098, Blast_Score=337, Evalue=2e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_BACV8 (A6L3D0)
Other databases:
- EMBL: CP000139 - RefSeq: YP_001299816.1 - ProteinModelPortal: A6L3D0 - SMR: A6L3D0 - STRING: A6L3D0 - GeneID: 5303501 - GenomeReviews: CP000139_GR - KEGG: bvu:BVU_2537 - NMPDR: fig|435590.6.peg.2379 - eggNOG: COG0082 - HOGENOM: HBG292336 - OMA: SRFTTQR - ProtClustDB: PRK05382 - HAMAP: MF_00300_B - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 39167; Mature: 39167
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNSFGNIFRLTSFGESHGPGVGGVIDGFPAGIKIDMDFVQQELNRRRPGQSLLTTSRKE CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHCCCCC PDTVEFLSGIFEGKSTGCPIGFVVWNKNQHSNDYENIKNLFRPSHADYTYMQKYGIRDYR CCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCC GGGRSSARETISRVVAGALAKLALKQLGISVTAYTSQVGPVKLDKDYKSYNLDLIETNDV CCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCCCCCCEEEEECCCC RCPDPEKAKEMAELIWKIKGEGDTIGGVVSCVIKGCPIGLGQPVFGKLHAALGNAMLSIN CCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEE AVKGFSYGQGFDSMELKGSEQNDVFYNNNGRVETKSNYSGGIQGGISNGQDIYFRVAFKP EECCCCCCCCCCCCEECCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEEHHH VATILMEQHTVNINGTDTTMKAKGRHDACVLPRAVPIVEAMAAMTILDYYLIDRTTQL HHHHHHHHEEEEECCCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFNSFGNIFRLTSFGESHGPGVGGVIDGFPAGIKIDMDFVQQELNRRRPGQSLLTTSRKE CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHCCCCC PDTVEFLSGIFEGKSTGCPIGFVVWNKNQHSNDYENIKNLFRPSHADYTYMQKYGIRDYR CCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCC GGGRSSARETISRVVAGALAKLALKQLGISVTAYTSQVGPVKLDKDYKSYNLDLIETNDV CCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCCCCCCEEEEECCCC RCPDPEKAKEMAELIWKIKGEGDTIGGVVSCVIKGCPIGLGQPVFGKLHAALGNAMLSIN CCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEE AVKGFSYGQGFDSMELKGSEQNDVFYNNNGRVETKSNYSGGIQGGISNGQDIYFRVAFKP EECCCCCCCCCCCCEECCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEEHHH VATILMEQHTVNINGTDTTMKAKGRHDACVLPRAVPIVEAMAAMTILDYYLIDRTTQL HHHHHHHHEEEEECCCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA