Click here to switch to the map view.

The map label for this gene is xynC [H]

Identifier: 150005020

GI number: 150005020

Start: 3187980

End: 3188798

Strand: Direct

Name: xynC [H]

Synonym: BVU_2485

Alternate gene names: 150005020

Gene position: 3187980-3188798 (Clockwise)

Preceding gene: 150005017

Following gene: 150005021

Centisome position: 61.74

GC content: 41.03

Gene sequence:

>819_bases
ATGAAAAAACGATATTGGGCTTTTTTGATAGGAAGCTGGTGTTTGTCTGTAGGAATGCAGGCAGCTAAGGTGGATACTTT
GTCGGTACATAGCGATGCAATGAATAAAGAGGTTCAGGTAATTACCATCTGTCCGGATAAAGCCATGGCAGGTGAAAAAT
GTCCCGTACTTTATCTGCTTCACGGATATGGGGGCAATGCGGGAACATGGCTCGGGATAAAACCGGAATTACCTCGGATA
GCTGATAAGGAAGGAATCATTTTTGTTTGTCCGGACGGGAAGAACAGTTGGTATTGGGACAGCCCTTTGAACAAGGAGTA
CCGTTATGAAACATTCGTGTCAAAAGAATTGGTGAACTATATTGATAAGAATTTTACTACGAAAGCGGAGAGAGGGGGAC
GTGCTGTCACCGGGTTAAGTATGGGTGGTCATGGAAGTTTATGGTTATCCATCCGTCATAAAGATGTCTTTGGAGGAGGA
GGTAGTATGAGTGGAGGTTTAGATATCCGTCCGTTTCCCAATAATTGGGAGATGAAGAAGCAATTAGGTGAAGAAGCGAG
CAACAAGCAGAGATGGGACGAACATACGGTAATTAATCAGTTGGATAAGATAAAGAATGGTGATTTGGCTGTTATAATAG
ATTGCGGTTGTGATGATTTTTTTCTGGAAGTGAATAAGGCTGTACACGAAAAACTGTTGAAGAAGAAAATAAATCATGAC
TTTATCATCCGTCCGGGTGGGCATACAGGCAGGTATTGGAATAATGCCATAGACTATCAAATACTATTTTTCAGTAAGTT
CTTTAATAAATCGAAATAA

Upstream 100 bases:

>100_bases
CATTGTTTCTTTTTATTTATGACAACAAAGATAGCGGAAAGAAGATGCAACTAAATTGCAAATTATATTGTACCTTTACA
TCGGGTAATTTTTTATATAC

Downstream 100 bases:

>100_bases
TAAAATGGATAAGATTGTTTTTATCACAGGAGCTTCCAGCGGTATCGGTGCCGGATGCGCTCGCAAGTTTGCTTCACAGG
GAGCAAGTTTGATTTTAAAT

Product: acetyl esterase

Products: NA

Alternate protein names: Acetylxylosidase [H]

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKKRYWAFLIGSWCLSVGMQAAKVDTLSVHSDAMNKEVQVITICPDKAMAGEKCPVLYLLHGYGGNAGTWLGIKPELPRI
ADKEGIIFVCPDGKNSWYWDSPLNKEYRYETFVSKELVNYIDKNFTTKAERGGRAVTGLSMGGHGSLWLSIRHKDVFGGG
GSMSGGLDIRPFPNNWEMKKQLGEEASNKQRWDEHTVINQLDKIKNGDLAVIIDCGCDDFFLEVNKAVHEKLLKKKINHD
FIIRPGGHTGRYWNNAIDYQILFFSKFFNKSK

Sequences:

>Translated_272_residues
MKKRYWAFLIGSWCLSVGMQAAKVDTLSVHSDAMNKEVQVITICPDKAMAGEKCPVLYLLHGYGGNAGTWLGIKPELPRI
ADKEGIIFVCPDGKNSWYWDSPLNKEYRYETFVSKELVNYIDKNFTTKAERGGRAVTGLSMGGHGSLWLSIRHKDVFGGG
GSMSGGLDIRPFPNNWEMKKQLGEEASNKQRWDEHTVINQLDKIKNGDLAVIIDCGCDDFFLEVNKAVHEKLLKKKINHD
FIIRPGGHTGRYWNNAIDYQILFFSKFFNKSK
>Mature_272_residues
MKKRYWAFLIGSWCLSVGMQAAKVDTLSVHSDAMNKEVQVITICPDKAMAGEKCPVLYLLHGYGGNAGTWLGIKPELPRI
ADKEGIIFVCPDGKNSWYWDSPLNKEYRYETFVSKELVNYIDKNFTTKAERGGRAVTGLSMGGHGSLWLSIRHKDVFGGG
GSMSGGLDIRPFPNNWEMKKQLGEEASNKQRWDEHTVINQLDKIKNGDLAVIIDCGCDDFFLEVNKAVHEKLLKKKINHD
FIIRPGGHTGRYWNNAIDYQILFFSKFFNKSK

Specific function: Unknown

COG id: COG0627

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000801 [H]

Pfam domain/function: PF00756 Esterase [H]

EC number: NA

Molecular weight: Translated: 30788; Mature: 30788

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRYWAFLIGSWCLSVGMQAAKVDTLSVHSDAMNKEVQVITICPDKAMAGEKCPVLYLL
CCCEEEHHHHHHHHHHHCCCHHEEEEEEECCHHCCCCEEEEEECCCCCCCCCCCCEEEEE
HGYGGNAGTWLGIKPELPRIADKEGIIFVCPDGKNSWYWDSPLNKEYRYETFVSKELVNY
ECCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHH
IDKNFTTKAERGGRAVTGLSMGGHGSLWLSIRHKDVFGGGGSMSGGLDIRPFPNNWEMKK
HHCCCCCHHHCCCEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCEEECCCCCCCHHHH
QLGEEASNKQRWDEHTVINQLDKIKNGDLAVIIDCGCDDFFLEVNKAVHEKLLKKKINHD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
FIIRPGGHTGRYWNNAIDYQILFFSKFFNKSK
EEEECCCCCCCCCCCCCCEEEEEEEHHHCCCC
>Mature Secondary Structure
MKKRYWAFLIGSWCLSVGMQAAKVDTLSVHSDAMNKEVQVITICPDKAMAGEKCPVLYLL
CCCEEEHHHHHHHHHHHCCCHHEEEEEEECCHHCCCCEEEEEECCCCCCCCCCCCEEEEE
HGYGGNAGTWLGIKPELPRIADKEGIIFVCPDGKNSWYWDSPLNKEYRYETFVSKELVNY
ECCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHH
IDKNFTTKAERGGRAVTGLSMGGHGSLWLSIRHKDVFGGGGSMSGGLDIRPFPNNWEMKK
HHCCCCCHHHCCCEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCEEECCCCCCCHHHH
QLGEEASNKQRWDEHTVINQLDKIKNGDLAVIIDCGCDDFFLEVNKAVHEKLLKKKINHD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
FIIRPGGHTGRYWNNAIDYQILFFSKFFNKSK
EEEECCCCCCCCCCCCCCEEEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2111111 [H]