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The map label for this gene is intD [C]

Identifier: 150005005

GI number: 150005005

Start: 3171749

End: 3172987

Strand: Direct

Name: intD [C]

Synonym: BVU_2470

Alternate gene names: 150005005

Gene position: 3171749-3172987 (Clockwise)

Preceding gene: 150004998

Following gene: 150005006

Centisome position: 61.43

GC content: 40.52

Gene sequence:

>1239_bases
ATGAAGAGTACATTTTCCGTTCTTTTCTTTGTGAAAAAGGACAAGCAAAAAATCAATGGCAGTTACCCTATTTTCGTCCG
TATCACGATTGACGGTGTGGCAAGCCGTTTCAATTCCAAGCTGGACGTTCAACCCAAACTTTGGGACGGTAAGGCAGGCA
AAGCCGCCGGACGTTCTGCGGAAGCTACCCGCATCAACAGATTGCTGGATGATATAAACGCATCCCTTAATACCATCTAT
CACGAACTGCAACGGCGTGACAATTATGTTACCGCCGAAAAAGTGAAGAATGAATTTTTAGGGCATAGCGAGAACCACGA
TACCATCCTTAACCTTTTCCAAAAGCACAATGACGATGTGAAACAGTTGGTCGGCATATCCAAAACGATTGCCACTTATC
GCAAATATGAAGTAACCCGCCGCCATCTTGCCGAGTTCATCCAAAGCAAATATAACCTGTCGGATATTTCTATAAAGGAA
ATAACCCCGATGTTCATTACAGACTTCGAGTTATATTTGCGTACCACCTGTAAATGTGGTTATAATACGACTGCCAAGTT
CATGCAGTTCTTCAAACGCATTATCTTGATAGCCCGTAATAACGGCATCTTGATAGGCGACCCGTTCGCCAACTATAAAA
TACGTTTGGAGAAAGTGGATAGAGGGTATTTGACAGAGGACGAAATAAAAATCATCCTCAAAAAGAAGATGGTTTCCGAG
CGATTGGAACAGGTGCGTGATGTTTTTATCTTTTCCTGTTTCAGTGGTTTGGCTTATGTGGATGTTGCAAACTTAAAGGA
AGATAATATCCGCAAGTCCTTTGACGGTAATTTATGGATAATTACGAAACGCCAAAAAACAAATACAGACGTGAATGTTC
CCTTGCTGGATATTCCTAAAATGATATTGGAAAAATACAAAGGTAAATTGCCGAATGGAAAGGTACTTCCTATTATCAGT
AATCAGAAACTAAATGCGTATTTGAAAGAAATAGCGGATGTATGCGGAATTAAAAAGAACTTGACATTCCACCTTGCAAG
ACATACATTTGCCACGACAACCACACTTGCTAAAGGTGTGCCCATTGAAACAGTCAGCAAGATGTTGGGACACACCAATA
TAGAAACGACACAGATATACGCCCGCATTACCAATAACAAAATCAGTAACGATATGCAGGGGCTTGACAAGAAGTTTGTC
GGCATTGAAAAAATTTACAAAGAAGTATCAATGAAATAG

Upstream 100 bases:

>100_bases
TTAGTCCGAAATTGGCGAACTTCTGTCGCTATTTGGCGAGCCTGTATAAACTTCACTTTGAGCTAATTAACGTAGTTTTG
TAACCTAAAAAAGTGAGTTT

Downstream 100 bases:

>100_bases
TTGTATAGGGGATTTATCGCAATTAGTGATAAGTCCCTTTATGCTTTTAATTATTCACCATTAAATAGTAACATTATGGA
TTTACAAATCATTCAGAGCA

Product: putative transposase

Products: NA

Alternate protein names: Tyrosine Type Site-Specific Recombinase; Transposase; Integrase Family Protein; Phage Integrase Family Protein; Site-Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Bacteriophage Integrase; Phage Integrase; Integrase/Transposase; Integrase Protein; Mobilizable Transposon Int Protein; Mobilizable Transposon Protein Int Protein; Prophage; Integrase Domain Protein Sam Domain Protein

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKSTFSVLFFVKKDKQKINGSYPIFVRITIDGVASRFNSKLDVQPKLWDGKAGKAAGRSAEATRINRLLDDINASLNTIY
HELQRRDNYVTAEKVKNEFLGHSENHDTILNLFQKHNDDVKQLVGISKTIATYRKYEVTRRHLAEFIQSKYNLSDISIKE
ITPMFITDFELYLRTTCKCGYNTTAKFMQFFKRIILIARNNGILIGDPFANYKIRLEKVDRGYLTEDEIKIILKKKMVSE
RLEQVRDVFIFSCFSGLAYVDVANLKEDNIRKSFDGNLWIITKRQKTNTDVNVPLLDIPKMILEKYKGKLPNGKVLPIIS
NQKLNAYLKEIADVCGIKKNLTFHLARHTFATTTTLAKGVPIETVSKMLGHTNIETTQIYARITNNKISNDMQGLDKKFV
GIEKIYKEVSMK

Sequences:

>Translated_412_residues
MKSTFSVLFFVKKDKQKINGSYPIFVRITIDGVASRFNSKLDVQPKLWDGKAGKAAGRSAEATRINRLLDDINASLNTIY
HELQRRDNYVTAEKVKNEFLGHSENHDTILNLFQKHNDDVKQLVGISKTIATYRKYEVTRRHLAEFIQSKYNLSDISIKE
ITPMFITDFELYLRTTCKCGYNTTAKFMQFFKRIILIARNNGILIGDPFANYKIRLEKVDRGYLTEDEIKIILKKKMVSE
RLEQVRDVFIFSCFSGLAYVDVANLKEDNIRKSFDGNLWIITKRQKTNTDVNVPLLDIPKMILEKYKGKLPNGKVLPIIS
NQKLNAYLKEIADVCGIKKNLTFHLARHTFATTTTLAKGVPIETVSKMLGHTNIETTQIYARITNNKISNDMQGLDKKFV
GIEKIYKEVSMK
>Mature_412_residues
MKSTFSVLFFVKKDKQKINGSYPIFVRITIDGVASRFNSKLDVQPKLWDGKAGKAAGRSAEATRINRLLDDINASLNTIY
HELQRRDNYVTAEKVKNEFLGHSENHDTILNLFQKHNDDVKQLVGISKTIATYRKYEVTRRHLAEFIQSKYNLSDISIKE
ITPMFITDFELYLRTTCKCGYNTTAKFMQFFKRIILIARNNGILIGDPFANYKIRLEKVDRGYLTEDEIKIILKKKMVSE
RLEQVRDVFIFSCFSGLAYVDVANLKEDNIRKSFDGNLWIITKRQKTNTDVNVPLLDIPKMILEKYKGKLPNGKVLPIIS
NQKLNAYLKEIADVCGIKKNLTFHLARHTFATTTTLAKGVPIETVSKMLGHTNIETTQIYARITNNKISNDMQGLDKKFV
GIEKIYKEVSMK

Specific function: Integrase From The Cryptic Lambdoic Prophage Dlp12. Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From Th

COG id: COG4974

COG function: function code L; Site-specific recombinase XerD

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47374; Mature: 47374

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTFSVLFFVKKDKQKINGSYPIFVRITIDGVASRFNSKLDVQPKLWDGKAGKAAGRSA
CCCCEEEEEEEECCHHHCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
EATRINRLLDDINASLNTIYHELQRRDNYVTAEKVKNEFLGHSENHDTILNLFQKHNDDV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHH
KQLVGISKTIATYRKYEVTRRHLAEFIQSKYNLSDISIKEITPMFITDFELYLRTTCKCG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCC
YNTTAKFMQFFKRIILIARNNGILIGDPFANYKIRLEKVDRGYLTEDEIKIILKKKMVSE
CCCHHHHHHHHHHHEEEECCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
RLEQVRDVFIFSCFSGLAYVDVANLKEDNIRKSFDGNLWIITKRQKTNTDVNVPLLDIPK
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCHHHHHH
MILEKYKGKLPNGKVLPIISNQKLNAYLKEIADVCGIKKNLTFHLARHTFATTTTLAKGV
HHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCC
PIETVSKMLGHTNIETTQIYARITNNKISNDMQGLDKKFVGIEKIYKEVSMK
CHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSTFSVLFFVKKDKQKINGSYPIFVRITIDGVASRFNSKLDVQPKLWDGKAGKAAGRSA
CCCCEEEEEEEECCHHHCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
EATRINRLLDDINASLNTIYHELQRRDNYVTAEKVKNEFLGHSENHDTILNLFQKHNDDV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHH
KQLVGISKTIATYRKYEVTRRHLAEFIQSKYNLSDISIKEITPMFITDFELYLRTTCKCG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCC
YNTTAKFMQFFKRIILIARNNGILIGDPFANYKIRLEKVDRGYLTEDEIKIILKKKMVSE
CCCHHHHHHHHHHHEEEECCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
RLEQVRDVFIFSCFSGLAYVDVANLKEDNIRKSFDGNLWIITKRQKTNTDVNVPLLDIPK
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCHHHHHH
MILEKYKGKLPNGKVLPIISNQKLNAYLKEIADVCGIKKNLTFHLARHTFATTTTLAKGV
HHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCC
PIETVSKMLGHTNIETTQIYARITNNKISNDMQGLDKKFVGIEKIYKEVSMK
CHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA