Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

Click here to switch to the map view.

The map label for this gene is 150004982

Identifier: 150004982

GI number: 150004982

Start: 3143077

End: 3144525

Strand: Reverse

Name: 150004982

Synonym: BVU_2446

Alternate gene names: NA

Gene position: 3144525-3143077 (Counterclockwise)

Preceding gene: 150004983

Following gene: 150004981

Centisome position: 60.9

GC content: 38.3

Gene sequence:

>1449_bases
ATGAAAGTATTTAAATATTTATTTATCAGTTCCATTATGTTTGCCGTCACTTCGTGCGGAAATGACTGGCTAGATCTAGC
CCCCTCCACACAAGTGGATACAGAAACCAGTATCAATGTTTTGTCAGATATTGAATTCACATTGAACGGAATCTACAGCA
CAATGCAAAGTTCAGATGCATACTCCGGCCGTCTGGTATATTATGGAGATGTAACTGGAGATGACATGCAGGCTGTAAGT
TCAACGAAACGAACCGGTAATTATTACCGTTTCAATTTTACTAAAGACAATGGTCCCAGCAGTCATTGGTCATATCTGTA
CTCTATTATCCAGAACTGTAATCTGATTCTAATGAATGTTGATAAACTATCTATAGATGAAGATGAAACCGAATATAAAA
ATGATTTGAAAGGCCAGGCATTAGCCATCCGTGGTATGGCACTATTCGACCTGACACGTATTTTTGGTTATCCCTACCTA
AAAGATAACGGAGCTTCATTAGGCGTGCCCATTGTGAAAGAGTTATCAACCATAGACAGTAAACCCGCACGAAATACAGT
AGCCGAATGTTATACGGAAATTATTTCCGACCTCAAAAACAGTACAGAGCTGCTGAGCGGTGATTTTAATAAAGGAAAAG
TAAACAGATGGGCTGCTATGACATTGTTGAGCCGAGTATATTTATATAAAGGAGAATACAATGAAGCATTGACCATGGCT
GAAAATGCAATAAAGGGTGCAGAAAAAGAAGGCTACGCTCTTTGGACAAACGAAGAATATCCAACCGCATGGGGCAATGA
CGCATCAGCATCCAATCCTGGTGAAATATTATTCGAAATTGTCAATCTGACTACAGACAGTCCGGGCAAAGAAAGCATGG
GATATCTGAACTCATACAACGGTTATGACGATATGTGTATTACTTGCTCTTTTTATCAATTATTAAAGAAAGATCCCAAA
GACGTCCGGTTGAAAATCTTGAGTTTTGACAAAAAGTACTACGCATACGTCAATAAATACCAACCTCAGCAAGGAGAAAA
CATAACCGATGCCAATATTCCGCTTATACGCCTTTCAGAAGCCTATCTGAATGCTGCTGAAGCGGCCGTACAGACAGGAG
ATAATGCCAAAGCAGTGAAATATTTGAATTCCATAGTACAACGAGCTAATCCGGAAAATTCAGTGGAAGGAAAAACATTA
ACATTAGAAAATGTATTAGACGAACGTCGTAAAGAATTGGTAGCAGAAGGACATCGTATGTACGATGTTATCAGAAATGG
AATGACTGTCAAACGAATCGATGTGAAAGACAGTGATATAAACAAAACCAAACATAATACTGCTTACATGGAATATGACT
GGAATTTCCATAAAATTCTACTTCCTATTCCCAAAAAAGAAATGGACGCAAATCCTAATATGAAACAGAATCCAGGATAT
GTCGATTAA

Upstream 100 bases:

>100_bases
GAAGCTGTCAGTGGTGGTAGTGCCATCTGGGGAACTCCTCCTTTGAAGACTGTAACCTTTGGTCTAAGCGTTAATTTCTA
ACCCATTAAAAACTTGAATT

Downstream 100 bases:

>100_bases
ATAATTCAAATACCAAATCGATGACAAGCAAGACTAATTTTATCAACTACTTTCTTCTTGCATTTACCCTCGCCTTCATC
AGTTCCGGCCTTAGTGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; RagB/SusD Domain-Containing Protein; SusD/RagB Family Protein; Lipoprotein; Ragb/Susd DomaiN-Containing Protein; RagB/SusD Family Protein; Tetratricopeptide Domain Protein; Outer Membrane Receptor Protein; SusD Outer Membrane Protein

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MKVFKYLFISSIMFAVTSCGNDWLDLAPSTQVDTETSINVLSDIEFTLNGIYSTMQSSDAYSGRLVYYGDVTGDDMQAVS
STKRTGNYYRFNFTKDNGPSSHWSYLYSIIQNCNLILMNVDKLSIDEDETEYKNDLKGQALAIRGMALFDLTRIFGYPYL
KDNGASLGVPIVKELSTIDSKPARNTVAECYTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMA
ENAIKGAEKEGYALWTNEEYPTAWGNDASASNPGEILFEIVNLTTDSPGKESMGYLNSYNGYDDMCITCSFYQLLKKDPK
DVRLKILSFDKKYYAYVNKYQPQQGENITDANIPLIRLSEAYLNAAEAAVQTGDNAKAVKYLNSIVQRANPENSVEGKTL
TLENVLDERRKELVAEGHRMYDVIRNGMTVKRIDVKDSDINKTKHNTAYMEYDWNFHKILLPIPKKEMDANPNMKQNPGY
VD

Sequences:

>Translated_482_residues
MKVFKYLFISSIMFAVTSCGNDWLDLAPSTQVDTETSINVLSDIEFTLNGIYSTMQSSDAYSGRLVYYGDVTGDDMQAVS
STKRTGNYYRFNFTKDNGPSSHWSYLYSIIQNCNLILMNVDKLSIDEDETEYKNDLKGQALAIRGMALFDLTRIFGYPYL
KDNGASLGVPIVKELSTIDSKPARNTVAECYTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMA
ENAIKGAEKEGYALWTNEEYPTAWGNDASASNPGEILFEIVNLTTDSPGKESMGYLNSYNGYDDMCITCSFYQLLKKDPK
DVRLKILSFDKKYYAYVNKYQPQQGENITDANIPLIRLSEAYLNAAEAAVQTGDNAKAVKYLNSIVQRANPENSVEGKTL
TLENVLDERRKELVAEGHRMYDVIRNGMTVKRIDVKDSDINKTKHNTAYMEYDWNFHKILLPIPKKEMDANPNMKQNPGY
VD
>Mature_482_residues
MKVFKYLFISSIMFAVTSCGNDWLDLAPSTQVDTETSINVLSDIEFTLNGIYSTMQSSDAYSGRLVYYGDVTGDDMQAVS
STKRTGNYYRFNFTKDNGPSSHWSYLYSIIQNCNLILMNVDKLSIDEDETEYKNDLKGQALAIRGMALFDLTRIFGYPYL
KDNGASLGVPIVKELSTIDSKPARNTVAECYTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMA
ENAIKGAEKEGYALWTNEEYPTAWGNDASASNPGEILFEIVNLTTDSPGKESMGYLNSYNGYDDMCITCSFYQLLKKDPK
DVRLKILSFDKKYYAYVNKYQPQQGENITDANIPLIRLSEAYLNAAEAAVQTGDNAKAVKYLNSIVQRANPENSVEGKTL
TLENVLDERRKELVAEGHRMYDVIRNGMTVKRIDVKDSDINKTKHNTAYMEYDWNFHKILLPIPKKEMDANPNMKQNPGY
VD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54495; Mature: 54495

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFKYLFISSIMFAVTSCGNDWLDLAPSTQVDTETSINVLSDIEFTLNGIYSTMQSSDA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
YSGRLVYYGDVTGDDMQAVSSTKRTGNYYRFNFTKDNGPSSHWSYLYSIIQNCNLILMNV
CCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEC
DKLSIDEDETEYKNDLKGQALAIRGMALFDLTRIFGYPYLKDNGASLGVPIVKELSTIDS
CCCCCCCCHHHHHHCCCCCEEEECCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCC
KPARNTVAECYTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
ENAIKGAEKEGYALWTNEEYPTAWGNDASASNPGEILFEIVNLTTDSPGKESMGYLNSYN
HHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCHHHCCC
GYDDMCITCSFYQLLKKDPKDVRLKILSFDKKYYAYVNKYQPQQGENITDANIPLIRLSE
CCCCEEEHHHHHHHHHCCCHHEEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCEEEEHH
AYLNAAEAAVQTGDNAKAVKYLNSIVQRANPENSVEGKTLTLENVLDERRKELVAEGHRM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHCCHHH
YDVIRNGMTVKRIDVKDSDINKTKHNTAYMEYDWNFHKILLPIPKKEMDANPNMKQNPGY
HHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCHHHCCCCCCCCCCCCC
VD
CC
>Mature Secondary Structure
MKVFKYLFISSIMFAVTSCGNDWLDLAPSTQVDTETSINVLSDIEFTLNGIYSTMQSSDA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
YSGRLVYYGDVTGDDMQAVSSTKRTGNYYRFNFTKDNGPSSHWSYLYSIIQNCNLILMNV
CCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEC
DKLSIDEDETEYKNDLKGQALAIRGMALFDLTRIFGYPYLKDNGASLGVPIVKELSTIDS
CCCCCCCCHHHHHHCCCCCEEEECCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCC
KPARNTVAECYTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
ENAIKGAEKEGYALWTNEEYPTAWGNDASASNPGEILFEIVNLTTDSPGKESMGYLNSYN
HHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCHHHCCC
GYDDMCITCSFYQLLKKDPKDVRLKILSFDKKYYAYVNKYQPQQGENITDANIPLIRLSE
CCCCEEEHHHHHHHHHCCCHHEEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCEEEEHH
AYLNAAEAAVQTGDNAKAVKYLNSIVQRANPENSVEGKTLTLENVLDERRKELVAEGHRM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHCCHHH
YDVIRNGMTVKRIDVKDSDINKTKHNTAYMEYDWNFHKILLPIPKKEMDANPNMKQNPGY
HHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCHHHCCCCCCCCCCCCC
VD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA