| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004982
Identifier: 150004982
GI number: 150004982
Start: 3143077
End: 3144525
Strand: Reverse
Name: 150004982
Synonym: BVU_2446
Alternate gene names: NA
Gene position: 3144525-3143077 (Counterclockwise)
Preceding gene: 150004983
Following gene: 150004981
Centisome position: 60.9
GC content: 38.3
Gene sequence:
>1449_bases ATGAAAGTATTTAAATATTTATTTATCAGTTCCATTATGTTTGCCGTCACTTCGTGCGGAAATGACTGGCTAGATCTAGC CCCCTCCACACAAGTGGATACAGAAACCAGTATCAATGTTTTGTCAGATATTGAATTCACATTGAACGGAATCTACAGCA CAATGCAAAGTTCAGATGCATACTCCGGCCGTCTGGTATATTATGGAGATGTAACTGGAGATGACATGCAGGCTGTAAGT TCAACGAAACGAACCGGTAATTATTACCGTTTCAATTTTACTAAAGACAATGGTCCCAGCAGTCATTGGTCATATCTGTA CTCTATTATCCAGAACTGTAATCTGATTCTAATGAATGTTGATAAACTATCTATAGATGAAGATGAAACCGAATATAAAA ATGATTTGAAAGGCCAGGCATTAGCCATCCGTGGTATGGCACTATTCGACCTGACACGTATTTTTGGTTATCCCTACCTA AAAGATAACGGAGCTTCATTAGGCGTGCCCATTGTGAAAGAGTTATCAACCATAGACAGTAAACCCGCACGAAATACAGT AGCCGAATGTTATACGGAAATTATTTCCGACCTCAAAAACAGTACAGAGCTGCTGAGCGGTGATTTTAATAAAGGAAAAG TAAACAGATGGGCTGCTATGACATTGTTGAGCCGAGTATATTTATATAAAGGAGAATACAATGAAGCATTGACCATGGCT GAAAATGCAATAAAGGGTGCAGAAAAAGAAGGCTACGCTCTTTGGACAAACGAAGAATATCCAACCGCATGGGGCAATGA CGCATCAGCATCCAATCCTGGTGAAATATTATTCGAAATTGTCAATCTGACTACAGACAGTCCGGGCAAAGAAAGCATGG GATATCTGAACTCATACAACGGTTATGACGATATGTGTATTACTTGCTCTTTTTATCAATTATTAAAGAAAGATCCCAAA GACGTCCGGTTGAAAATCTTGAGTTTTGACAAAAAGTACTACGCATACGTCAATAAATACCAACCTCAGCAAGGAGAAAA CATAACCGATGCCAATATTCCGCTTATACGCCTTTCAGAAGCCTATCTGAATGCTGCTGAAGCGGCCGTACAGACAGGAG ATAATGCCAAAGCAGTGAAATATTTGAATTCCATAGTACAACGAGCTAATCCGGAAAATTCAGTGGAAGGAAAAACATTA ACATTAGAAAATGTATTAGACGAACGTCGTAAAGAATTGGTAGCAGAAGGACATCGTATGTACGATGTTATCAGAAATGG AATGACTGTCAAACGAATCGATGTGAAAGACAGTGATATAAACAAAACCAAACATAATACTGCTTACATGGAATATGACT GGAATTTCCATAAAATTCTACTTCCTATTCCCAAAAAAGAAATGGACGCAAATCCTAATATGAAACAGAATCCAGGATAT GTCGATTAA
Upstream 100 bases:
>100_bases GAAGCTGTCAGTGGTGGTAGTGCCATCTGGGGAACTCCTCCTTTGAAGACTGTAACCTTTGGTCTAAGCGTTAATTTCTA ACCCATTAAAAACTTGAATT
Downstream 100 bases:
>100_bases ATAATTCAAATACCAAATCGATGACAAGCAAGACTAATTTTATCAACTACTTTCTTCTTGCATTTACCCTCGCCTTCATC AGTTCCGGCCTTAGTGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; RagB/SusD Domain-Containing Protein; SusD/RagB Family Protein; Lipoprotein; Ragb/Susd DomaiN-Containing Protein; RagB/SusD Family Protein; Tetratricopeptide Domain Protein; Outer Membrane Receptor Protein; SusD Outer Membrane Protein
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MKVFKYLFISSIMFAVTSCGNDWLDLAPSTQVDTETSINVLSDIEFTLNGIYSTMQSSDAYSGRLVYYGDVTGDDMQAVS STKRTGNYYRFNFTKDNGPSSHWSYLYSIIQNCNLILMNVDKLSIDEDETEYKNDLKGQALAIRGMALFDLTRIFGYPYL KDNGASLGVPIVKELSTIDSKPARNTVAECYTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMA ENAIKGAEKEGYALWTNEEYPTAWGNDASASNPGEILFEIVNLTTDSPGKESMGYLNSYNGYDDMCITCSFYQLLKKDPK DVRLKILSFDKKYYAYVNKYQPQQGENITDANIPLIRLSEAYLNAAEAAVQTGDNAKAVKYLNSIVQRANPENSVEGKTL TLENVLDERRKELVAEGHRMYDVIRNGMTVKRIDVKDSDINKTKHNTAYMEYDWNFHKILLPIPKKEMDANPNMKQNPGY VD
Sequences:
>Translated_482_residues MKVFKYLFISSIMFAVTSCGNDWLDLAPSTQVDTETSINVLSDIEFTLNGIYSTMQSSDAYSGRLVYYGDVTGDDMQAVS STKRTGNYYRFNFTKDNGPSSHWSYLYSIIQNCNLILMNVDKLSIDEDETEYKNDLKGQALAIRGMALFDLTRIFGYPYL KDNGASLGVPIVKELSTIDSKPARNTVAECYTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMA ENAIKGAEKEGYALWTNEEYPTAWGNDASASNPGEILFEIVNLTTDSPGKESMGYLNSYNGYDDMCITCSFYQLLKKDPK DVRLKILSFDKKYYAYVNKYQPQQGENITDANIPLIRLSEAYLNAAEAAVQTGDNAKAVKYLNSIVQRANPENSVEGKTL TLENVLDERRKELVAEGHRMYDVIRNGMTVKRIDVKDSDINKTKHNTAYMEYDWNFHKILLPIPKKEMDANPNMKQNPGY VD >Mature_482_residues MKVFKYLFISSIMFAVTSCGNDWLDLAPSTQVDTETSINVLSDIEFTLNGIYSTMQSSDAYSGRLVYYGDVTGDDMQAVS STKRTGNYYRFNFTKDNGPSSHWSYLYSIIQNCNLILMNVDKLSIDEDETEYKNDLKGQALAIRGMALFDLTRIFGYPYL KDNGASLGVPIVKELSTIDSKPARNTVAECYTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMA ENAIKGAEKEGYALWTNEEYPTAWGNDASASNPGEILFEIVNLTTDSPGKESMGYLNSYNGYDDMCITCSFYQLLKKDPK DVRLKILSFDKKYYAYVNKYQPQQGENITDANIPLIRLSEAYLNAAEAAVQTGDNAKAVKYLNSIVQRANPENSVEGKTL TLENVLDERRKELVAEGHRMYDVIRNGMTVKRIDVKDSDINKTKHNTAYMEYDWNFHKILLPIPKKEMDANPNMKQNPGY VD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54495; Mature: 54495
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFKYLFISSIMFAVTSCGNDWLDLAPSTQVDTETSINVLSDIEFTLNGIYSTMQSSDA CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC YSGRLVYYGDVTGDDMQAVSSTKRTGNYYRFNFTKDNGPSSHWSYLYSIIQNCNLILMNV CCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEC DKLSIDEDETEYKNDLKGQALAIRGMALFDLTRIFGYPYLKDNGASLGVPIVKELSTIDS CCCCCCCCHHHHHHCCCCCEEEECCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCC KPARNTVAECYTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH ENAIKGAEKEGYALWTNEEYPTAWGNDASASNPGEILFEIVNLTTDSPGKESMGYLNSYN HHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCHHHCCC GYDDMCITCSFYQLLKKDPKDVRLKILSFDKKYYAYVNKYQPQQGENITDANIPLIRLSE CCCCEEEHHHHHHHHHCCCHHEEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCEEEEHH AYLNAAEAAVQTGDNAKAVKYLNSIVQRANPENSVEGKTLTLENVLDERRKELVAEGHRM HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHCCHHH YDVIRNGMTVKRIDVKDSDINKTKHNTAYMEYDWNFHKILLPIPKKEMDANPNMKQNPGY HHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCHHHCCCCCCCCCCCCC VD CC >Mature Secondary Structure MKVFKYLFISSIMFAVTSCGNDWLDLAPSTQVDTETSINVLSDIEFTLNGIYSTMQSSDA CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC YSGRLVYYGDVTGDDMQAVSSTKRTGNYYRFNFTKDNGPSSHWSYLYSIIQNCNLILMNV CCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEC DKLSIDEDETEYKNDLKGQALAIRGMALFDLTRIFGYPYLKDNGASLGVPIVKELSTIDS CCCCCCCCHHHHHHCCCCCEEEECCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCC KPARNTVAECYTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH ENAIKGAEKEGYALWTNEEYPTAWGNDASASNPGEILFEIVNLTTDSPGKESMGYLNSYN HHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCHHHCCC GYDDMCITCSFYQLLKKDPKDVRLKILSFDKKYYAYVNKYQPQQGENITDANIPLIRLSE CCCCEEEHHHHHHHHHCCCHHEEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCEEEEHH AYLNAAEAAVQTGDNAKAVKYLNSIVQRANPENSVEGKTLTLENVLDERRKELVAEGHRM HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHCCHHH YDVIRNGMTVKRIDVKDSDINKTKHNTAYMEYDWNFHKILLPIPKKEMDANPNMKQNPGY HHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCHHHCCCCCCCCCCCCC VD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA