| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is melR [C]
Identifier: 150004963
GI number: 150004963
Start: 3113540
End: 3115357
Strand: Direct
Name: melR [C]
Synonym: BVU_2426
Alternate gene names: 150004963
Gene position: 3113540-3115357 (Clockwise)
Preceding gene: 150004962
Following gene: 150004964
Centisome position: 60.3
GC content: 38.83
Gene sequence:
>1818_bases ATGACGAGAATGAAGATGTTCAAACTGTGGATGGTTGTAATGTTATTGGGACTCTTGCCCATTGTTTCAGAGGCGCAAGA AGAAATAAATAATGCCATTAATGTACAGTTGGAGTATCTGAAAAAGTATCCTAAAGACAAAGAAGCACTTCGGAAAGTTA GTTTTCTCTATCTGAATAAAGCAGATTATGATCAGGCTATCTTTTATGGTCGACAATTGTTTGAGTTGGGTTATAATGAA CGGGATTACAATGGCGCTGTAATTTATTCTCATATTTGTCTGGGGCAGGCCCATATGATGAAGGGAAATGTAAAGGAGGC TTATAGTCATTTAGGGCAGGCCAGGCTGATAGGTGAAAGTAATAAAAATGATTCCGCCTTATGTTCCGTATATAATGGGC TGGGACTTTATGCATCGAATGTCCAAAAAGACTATTATCGTTCACTTACCTATTTCTTCAAAGGAGTTGAAGCTGCAAGA CGTTGTCATTATGACAGGCTCTATTCCATTTTGCTTTCTAATATTGCCGGTATTTATTATTTGAAAAATGATAGCACAGG ATTGAAATATGCTCTTGAATGTTATGAACTGGGACATGAACGGAAAGATCCTTATCTGATTTATAGTGGTTCAACCAATA CCGCTTATATGTATTATTTGAAGAGTGACTATAATACAGCATTGAAATATATTCAGGAGGCGGAGTTCACCATGGTGCAG AATGACTTTTATGATCAATCAAACGTTTACAATCTTTATGGATATATTCTGCATAAATTGAATAAAGATGATGAAGCGCT GGTTTTTTTCCGGAAGGCTTTGGATTTGAAAGAACAGGGAAATATTTCTTCAGTGATGAATTCTTATTTGGGCTATGCCG AAATTTTAATGGAGCATCACCAGTATGACCGGGCTGTCCGGATGCTGAAAGCCGGAATAGAACTGTCTTACCAACAGGCT AATGCCATCTATCGAAGTGACCTGTTGAAGGCTTTATCCCGATGTTATGAAGAAGATGGTATGCTGGTAGAGGCGTTGAA GTATCATAAGCTCTATCAGCTGGAAACAGATAGCTTATATAATGCGGAAAAGGAACGTGCTGTGGGGGAGATACGTGCAA AATACGATATGGAACGGCAGGAAAACGAGATAAAACAAAACCGTCTGGAATTATTGGAAAAGGAAAATAAGATGCAATTG CTTATAGCCGGATTTATCTGTATCTTCATAGCTGCCTCTTTACTATATTACTTATATTACAGAAAAAATAAGCTGTACCT TACCATTGTGAAGCAAAATCAGGACGCTATCCGGCGTGAACAGCAATTGCAGAACAAGATAGATGAGCAGTTTGCAGAGA TAGGCCGCCAGTCCGCTCTTTTACAAGAATATCTTACGGATTCGACGAAAACTTCTTTGCCGCAACCTGAGAAATATGCT TCATCCTCGTTGACAGATGAAAAGAAGCAGGATTTATTTCTGCGTTTGGAAACGCTGTTGTGGGAGGAGAAGGTATTTAC AGACAATTTGCTGACCAAAGAGAAAGTAGCGGAAATGTTGGGAACTAATCGTACTTATCTCTCTCAAATTATTAATGAGC AGACCAAGCAGACTTTTACTCAATTTGTAAATGGTTTCCGCACAAAAGAGGCAGTCCGTTTACTTTCCGATCCTGATAAC CAAACTCCGCTAAAGGCGATTTCAGCTGAATTGGGCTTTAATTCCATGACTACTTTTTATAGCCAGTTTCAGGCGGCTAC TGGTATGACTCCCGCTCAGTATAGAAACAAAGTGCAGGAATTGCATAAAAATAGATAA
Upstream 100 bases:
>100_bases GATTGAGCGAGCGTCGCATTGCTATCATTAAGGAATATAATTTTTATAATCAGCAATATTGTGGCTGTGAGTTCAGTATG CGGAAAGAAGAAAAGGGAGG
Downstream 100 bases:
>100_bases TCTATTAATTTGCTATCATAAATTTATCCAAATGCGGCAATTGCTGTATTTGGATAACCTATTTTTGCTATAATTTAAAA TTTTATGCATTAATTTGCTA
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; AraC Family Transcriptional Regulator; Protein Serine/Threonine Phosphatase; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator AraC Family Protein
Number of amino acids: Translated: 605; Mature: 604
Protein sequence:
>605_residues MTRMKMFKLWMVVMLLGLLPIVSEAQEEINNAINVQLEYLKKYPKDKEALRKVSFLYLNKADYDQAIFYGRQLFELGYNE RDYNGAVIYSHICLGQAHMMKGNVKEAYSHLGQARLIGESNKNDSALCSVYNGLGLYASNVQKDYYRSLTYFFKGVEAAR RCHYDRLYSILLSNIAGIYYLKNDSTGLKYALECYELGHERKDPYLIYSGSTNTAYMYYLKSDYNTALKYIQEAEFTMVQ NDFYDQSNVYNLYGYILHKLNKDDEALVFFRKALDLKEQGNISSVMNSYLGYAEILMEHHQYDRAVRMLKAGIELSYQQA NAIYRSDLLKALSRCYEEDGMLVEALKYHKLYQLETDSLYNAEKERAVGEIRAKYDMERQENEIKQNRLELLEKENKMQL LIAGFICIFIAASLLYYLYYRKNKLYLTIVKQNQDAIRREQQLQNKIDEQFAEIGRQSALLQEYLTDSTKTSLPQPEKYA SSSLTDEKKQDLFLRLETLLWEEKVFTDNLLTKEKVAEMLGTNRTYLSQIINEQTKQTFTQFVNGFRTKEAVRLLSDPDN QTPLKAISAELGFNSMTTFYSQFQAATGMTPAQYRNKVQELHKNR
Sequences:
>Translated_605_residues MTRMKMFKLWMVVMLLGLLPIVSEAQEEINNAINVQLEYLKKYPKDKEALRKVSFLYLNKADYDQAIFYGRQLFELGYNE RDYNGAVIYSHICLGQAHMMKGNVKEAYSHLGQARLIGESNKNDSALCSVYNGLGLYASNVQKDYYRSLTYFFKGVEAAR RCHYDRLYSILLSNIAGIYYLKNDSTGLKYALECYELGHERKDPYLIYSGSTNTAYMYYLKSDYNTALKYIQEAEFTMVQ NDFYDQSNVYNLYGYILHKLNKDDEALVFFRKALDLKEQGNISSVMNSYLGYAEILMEHHQYDRAVRMLKAGIELSYQQA NAIYRSDLLKALSRCYEEDGMLVEALKYHKLYQLETDSLYNAEKERAVGEIRAKYDMERQENEIKQNRLELLEKENKMQL LIAGFICIFIAASLLYYLYYRKNKLYLTIVKQNQDAIRREQQLQNKIDEQFAEIGRQSALLQEYLTDSTKTSLPQPEKYA SSSLTDEKKQDLFLRLETLLWEEKVFTDNLLTKEKVAEMLGTNRTYLSQIINEQTKQTFTQFVNGFRTKEAVRLLSDPDN QTPLKAISAELGFNSMTTFYSQFQAATGMTPAQYRNKVQELHKNR >Mature_604_residues TRMKMFKLWMVVMLLGLLPIVSEAQEEINNAINVQLEYLKKYPKDKEALRKVSFLYLNKADYDQAIFYGRQLFELGYNER DYNGAVIYSHICLGQAHMMKGNVKEAYSHLGQARLIGESNKNDSALCSVYNGLGLYASNVQKDYYRSLTYFFKGVEAARR CHYDRLYSILLSNIAGIYYLKNDSTGLKYALECYELGHERKDPYLIYSGSTNTAYMYYLKSDYNTALKYIQEAEFTMVQN DFYDQSNVYNLYGYILHKLNKDDEALVFFRKALDLKEQGNISSVMNSYLGYAEILMEHHQYDRAVRMLKAGIELSYQQAN AIYRSDLLKALSRCYEEDGMLVEALKYHKLYQLETDSLYNAEKERAVGEIRAKYDMERQENEIKQNRLELLEKENKMQLL IAGFICIFIAASLLYYLYYRKNKLYLTIVKQNQDAIRREQQLQNKIDEQFAEIGRQSALLQEYLTDSTKTSLPQPEKYAS SSLTDEKKQDLFLRLETLLWEEKVFTDNLLTKEKVAEMLGTNRTYLSQIINEQTKQTFTQFVNGFRTKEAVRLLSDPDNQ TPLKAISAELGFNSMTTFYSQFQAATGMTPAQYRNKVQELHKNR
Specific function: Transcription Activator For The Expression Of The Melab Operon. Melr Binds At Two Sites Located Upstream Of The Melab Transcription Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70703; Mature: 70571
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR ; PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRMKMFKLWMVVMLLGLLPIVSEAQEEINNAINVQLEYLKKYPKDKEALRKVSFLYLNK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECC ADYDQAIFYGRQLFELGYNERDYNGAVIYSHICLGQAHMMKGNVKEAYSHLGQARLIGES CCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHCHHHHHCCCHHHHHHHCCCEEEECCC NKNDSALCSVYNGLGLYASNVQKDYYRSLTYFFKGVEAARRCHYDRLYSILLSNIAGIYY CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE LKNDSTGLKYALECYELGHERKDPYLIYSGSTNTAYMYYLKSDYNTALKYIQEAEFTMVQ EECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHH NDFYDQSNVYNLYGYILHKLNKDDEALVFFRKALDLKEQGNISSVMNSYLGYAEILMEHH HCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH QYDRAVRMLKAGIELSYQQANAIYRSDLLKALSRCYEEDGMLVEALKYHKLYQLETDSLY HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCHHHH NAEKERAVGEIRAKYDMERQENEIKQNRLELLEKENKMQLLIAGFICIFIAASLLYYLYY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RKNKLYLTIVKQNQDAIRREQQLQNKIDEQFAEIGRQSALLQEYLTDSTKTSLPQPEKYA CCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHH SSSLTDEKKQDLFLRLETLLWEEKVFTDNLLTKEKVAEMLGTNRTYLSQIINEQTKQTFT HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH QFVNGFRTKEAVRLLSDPDNQTPLKAISAELGFNSMTTFYSQFQAATGMTPAQYRNKVQE HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH LHKNR HHCCC >Mature Secondary Structure TRMKMFKLWMVVMLLGLLPIVSEAQEEINNAINVQLEYLKKYPKDKEALRKVSFLYLNK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECC ADYDQAIFYGRQLFELGYNERDYNGAVIYSHICLGQAHMMKGNVKEAYSHLGQARLIGES CCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHCHHHHHCCCHHHHHHHCCCEEEECCC NKNDSALCSVYNGLGLYASNVQKDYYRSLTYFFKGVEAARRCHYDRLYSILLSNIAGIYY CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE LKNDSTGLKYALECYELGHERKDPYLIYSGSTNTAYMYYLKSDYNTALKYIQEAEFTMVQ EECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHH NDFYDQSNVYNLYGYILHKLNKDDEALVFFRKALDLKEQGNISSVMNSYLGYAEILMEHH HCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH QYDRAVRMLKAGIELSYQQANAIYRSDLLKALSRCYEEDGMLVEALKYHKLYQLETDSLY HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCHHHH NAEKERAVGEIRAKYDMERQENEIKQNRLELLEKENKMQLLIAGFICIFIAASLLYYLYY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RKNKLYLTIVKQNQDAIRREQQLQNKIDEQFAEIGRQSALLQEYLTDSTKTSLPQPEKYA CCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHH SSSLTDEKKQDLFLRLETLLWEEKVFTDNLLTKEKVAEMLGTNRTYLSQIINEQTKQTFT HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH QFVNGFRTKEAVRLLSDPDNQTPLKAISAELGFNSMTTFYSQFQAATGMTPAQYRNKVQE HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH LHKNR HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA