| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is cdr [H]
Identifier: 150004959
GI number: 150004959
Start: 3108448
End: 3110949
Strand: Direct
Name: cdr [H]
Synonym: BVU_2422
Alternate gene names: 150004959
Gene position: 3108448-3110949 (Clockwise)
Preceding gene: 150004950
Following gene: 150004960
Centisome position: 60.2
GC content: 46.8
Gene sequence:
>2502_bases ATGAAGTATATAGTAATAGGAGGCGTAGCAGGAGGTGCAACTGCTGCCGCACGTATCAGAAGAAACACGGAACAGGCGGA AATCATTTTGTTCGAGAAGGGAGAATACATTTCGTATGCCAATTGTGGTCTGCCTTATTATATAGGAGGTGTGATTGCGG AGCGGGAAAAATTGTTTGTACAGACTCCGGAGGCTTTCGGGAAACGTTTTAACATAGATGTGCGTACCCGGTCCGAGGTA ATAGCCATCCATTCTGCCGATAAGACAGTGGATATTCGTACTTCCGACGGGAAAACTTATACGGAGAGTTATGACAAATT ATTGCTTTCTCCGGGTGCGTCGCCTGTTCGTCCTCCCTTGCCGGGCATTGACAATGAAGGAATTTTTACCCTACGTAATG TGAATGATACCGATGCTATCAAGAGTTACTTGCAGCAGCATAAGGTGAAACGGGCGGTAATCATCGGGGCCGGATTCATC GGGTTGGAGATGGCGGAGAATCTGCAGGAAGCCGGTGCGGAAGTGGCGGTTGTAGAGATGGCAAATCAAGTCATGGCTCC TATTGATTTCTCTATGGCTTCTTTGGTGCACGAGCATTTGTTGCAGAAAGGAGTGCATCTCTACCTGGAAAAGGCGGTGG CTTCTTTCGAGCGCACGGTCAACGGACTGGAGGTTATTTTTAAATCGGGCGAAAGGCTGCCTGCCGATATGGTGTTGTTA TCCATCGGGGTACGTCCCAATACCTCATTGGTGACAGAGGCCGGACTGGAGATAGGGGAGATGCGCGGCATTAAGGTGAA CGATTACTTGCAGACTTCCGACGAGTATATTTATGCGGTGGGCGACGCTATCGAGTTCCGTCATCCGCTGACTGATAGAC CGTGGTTGAATTATCTGGCTGGTCCGGCCAACCGTCAGGCGCGTATTGTGGCAGATAACATGGTTTTTGGAAATAAGGTT ACATACGAAGGGGCTGTCGGTACTTCCATTGCCAAAATTTTTGATATGACTGTCGCTGCTTCAGGCCTTCCGGCAAAGCG GTTGAAACAGGCAGGCATTGATTATTTGTCGGCAACCATCCATTCCGGTTCCCATGCGGGATATTATCCCGATGCTTTAC AGATGTCCATTAAAATAACCTTCTCTCCTGTGAACGGGAAATTACTTGGAGCGCAGATTGTGGGGTATAATGGAGTGGAC AAACGTATTGACGAATTCTCGCAAGTGATTAAGCATAACGGAACTGTATATGACTTGATGGCTTTGGAGCAGGCATACGC TCCTCCTTTCTCTTCGGCTAAAGATCCTGTAGCAGTAGCCGGATATGTAGCCGGAAATATACTGAGCGGAAAGATGAAGC CTCTTTATTGGCGCGAGTTGCAGGCTGCCGATTTGAGTAAAGTTACGTTGGTTGATGTCCGTACTCCCGATGAATTTGCA CTCGGTGCTTTGAAGGGGGCTGTCAATATTCCTTTGGATGATATGCGCGAAAGGATGAAAGAGATTCCTCAGGATAAGCC GGTCTATTTGTATTGTGGAGTGGGGTTGAGAGGGTATCTGGCTTCTAATATATTGTTACAGAATGGCTTTGGGGAAGTAA GGAATTTAATAGGAGGTTTGAAACTGTATAAAGCGGCAACGGCTCCTCTGCCCAAGCCGAAGGAGTTCTCAAATTCCGGA TCTTCAAGTTCTGATTCTTCAAAAGTTGATCATTCTGAACACAGTAAAGATTCTGCTGAAGCTTATACTATTGCCTCTTC CGTCATTCCTTCTATGAAAGCAATAAAAGTGGATGCTTGTGGCATATCTTGTCCCGGTCCTATCATGAAGCTGAAGAAGA GTATGGAAGAACTGGCGGACGGCGAACGTCTGGAGATTGTCGCTACGGATGCCGGTTTCCCCCGCGATGCCGAAGCATGG TGCCAGACTACCGGGAACCGTTTTGTCTCAGTAAAGTCAGGAGCAGGAAAGTATGAGGTAATTGTTGAGAAAAGTACTCC GCAATCTTCTTCCTCGGAGGTTTGCCGGGAGGATAAAGGGAAAACTTTTATTCTGTTCAGTGACAACCTGGACAAAGTTT TAGCTACTTTTGTACTCGCAAACGGTGCGGCGGCTACGGGAAAGAAGGTGATCATCTTCTTTACTTTCTGGGGGCTGAAT GCTATCAAAAGATTGGACAAGCCTGCGGTGAAGAAAGATATCTGGGGGAAGATGTTCGGCATGATGCTGCCTTCCAGTTC TTTAAAGTTGAGATTGTCTAAAATGAATATGGGTGGAATGGGAGCCAGGATGATGCGATATATCATGAATAAGAAAAATA TCGACTCACTGGAATCTCTGCGTACTCAAGCCATTCAGAACGGAGTGGAATTTATAGCTTGCCAGATGTCAATGGATGTA ATGGGTGTGAAACGTGAGGAATTGCTGGATCATGTGACTATTGGCGGAGTGGCAACCTATATGAACCGTGCCGAACAGGC GAATGTAAACTTGTTTATTTAA
Upstream 100 bases:
>100_bases ATAATATTTTCCATAGGAAACTTTTTATTATAAGAAATATCATGTATGTTTGCATAAAGTTTCCATTGGAAAATATTAAA TCAAATAAAATAGTTCGATT
Downstream 100 bases:
>100_bases ATTTGCATGGAGAAAATAAAATCAATATGTGTCATGAGAGAGTTGTTCAAGGCTCTCTCTGAACTTGAAACCCGCTTGAT GGAACAATATGGAGTGTCAT
Product: pyridine nucleotide-disulphide oxidoreductase
Products: NA
Alternate protein names: CoA-disulfide reductase; CoADR [H]
Number of amino acids: Translated: 833; Mature: 833
Protein sequence:
>833_residues MKYIVIGGVAGGATAAARIRRNTEQAEIILFEKGEYISYANCGLPYYIGGVIAEREKLFVQTPEAFGKRFNIDVRTRSEV IAIHSADKTVDIRTSDGKTYTESYDKLLLSPGASPVRPPLPGIDNEGIFTLRNVNDTDAIKSYLQQHKVKRAVIIGAGFI GLEMAENLQEAGAEVAVVEMANQVMAPIDFSMASLVHEHLLQKGVHLYLEKAVASFERTVNGLEVIFKSGERLPADMVLL SIGVRPNTSLVTEAGLEIGEMRGIKVNDYLQTSDEYIYAVGDAIEFRHPLTDRPWLNYLAGPANRQARIVADNMVFGNKV TYEGAVGTSIAKIFDMTVAASGLPAKRLKQAGIDYLSATIHSGSHAGYYPDALQMSIKITFSPVNGKLLGAQIVGYNGVD KRIDEFSQVIKHNGTVYDLMALEQAYAPPFSSAKDPVAVAGYVAGNILSGKMKPLYWRELQAADLSKVTLVDVRTPDEFA LGALKGAVNIPLDDMRERMKEIPQDKPVYLYCGVGLRGYLASNILLQNGFGEVRNLIGGLKLYKAATAPLPKPKEFSNSG SSSSDSSKVDHSEHSKDSAEAYTIASSVIPSMKAIKVDACGISCPGPIMKLKKSMEELADGERLEIVATDAGFPRDAEAW CQTTGNRFVSVKSGAGKYEVIVEKSTPQSSSSEVCREDKGKTFILFSDNLDKVLATFVLANGAAATGKKVIIFFTFWGLN AIKRLDKPAVKKDIWGKMFGMMLPSSSLKLRLSKMNMGGMGARMMRYIMNKKNIDSLESLRTQAIQNGVEFIACQMSMDV MGVKREELLDHVTIGGVATYMNRAEQANVNLFI
Sequences:
>Translated_833_residues MKYIVIGGVAGGATAAARIRRNTEQAEIILFEKGEYISYANCGLPYYIGGVIAEREKLFVQTPEAFGKRFNIDVRTRSEV IAIHSADKTVDIRTSDGKTYTESYDKLLLSPGASPVRPPLPGIDNEGIFTLRNVNDTDAIKSYLQQHKVKRAVIIGAGFI GLEMAENLQEAGAEVAVVEMANQVMAPIDFSMASLVHEHLLQKGVHLYLEKAVASFERTVNGLEVIFKSGERLPADMVLL SIGVRPNTSLVTEAGLEIGEMRGIKVNDYLQTSDEYIYAVGDAIEFRHPLTDRPWLNYLAGPANRQARIVADNMVFGNKV TYEGAVGTSIAKIFDMTVAASGLPAKRLKQAGIDYLSATIHSGSHAGYYPDALQMSIKITFSPVNGKLLGAQIVGYNGVD KRIDEFSQVIKHNGTVYDLMALEQAYAPPFSSAKDPVAVAGYVAGNILSGKMKPLYWRELQAADLSKVTLVDVRTPDEFA LGALKGAVNIPLDDMRERMKEIPQDKPVYLYCGVGLRGYLASNILLQNGFGEVRNLIGGLKLYKAATAPLPKPKEFSNSG SSSSDSSKVDHSEHSKDSAEAYTIASSVIPSMKAIKVDACGISCPGPIMKLKKSMEELADGERLEIVATDAGFPRDAEAW CQTTGNRFVSVKSGAGKYEVIVEKSTPQSSSSEVCREDKGKTFILFSDNLDKVLATFVLANGAAATGKKVIIFFTFWGLN AIKRLDKPAVKKDIWGKMFGMMLPSSSLKLRLSKMNMGGMGARMMRYIMNKKNIDSLESLRTQAIQNGVEFIACQMSMDV MGVKREELLDHVTIGGVATYMNRAEQANVNLFI >Mature_833_residues MKYIVIGGVAGGATAAARIRRNTEQAEIILFEKGEYISYANCGLPYYIGGVIAEREKLFVQTPEAFGKRFNIDVRTRSEV IAIHSADKTVDIRTSDGKTYTESYDKLLLSPGASPVRPPLPGIDNEGIFTLRNVNDTDAIKSYLQQHKVKRAVIIGAGFI GLEMAENLQEAGAEVAVVEMANQVMAPIDFSMASLVHEHLLQKGVHLYLEKAVASFERTVNGLEVIFKSGERLPADMVLL SIGVRPNTSLVTEAGLEIGEMRGIKVNDYLQTSDEYIYAVGDAIEFRHPLTDRPWLNYLAGPANRQARIVADNMVFGNKV TYEGAVGTSIAKIFDMTVAASGLPAKRLKQAGIDYLSATIHSGSHAGYYPDALQMSIKITFSPVNGKLLGAQIVGYNGVD KRIDEFSQVIKHNGTVYDLMALEQAYAPPFSSAKDPVAVAGYVAGNILSGKMKPLYWRELQAADLSKVTLVDVRTPDEFA LGALKGAVNIPLDDMRERMKEIPQDKPVYLYCGVGLRGYLASNILLQNGFGEVRNLIGGLKLYKAATAPLPKPKEFSNSG SSSSDSSKVDHSEHSKDSAEAYTIASSVIPSMKAIKVDACGISCPGPIMKLKKSMEELADGERLEIVATDAGFPRDAEAW CQTTGNRFVSVKSGAGKYEVIVEKSTPQSSSSEVCREDKGKTFILFSDNLDKVLATFVLANGAAATGKKVIIFFTFWGLN AIKRLDKPAVKKDIWGKMFGMMLPSSSLKLRLSKMNMGGMGARMMRYIMNKKNIDSLESLRTQAIQNGVEFIACQMSMDV MGVKREELLDHVTIGGVATYMNRAEQANVNLFI
Specific function: Catalyzes specifically the NADPH-dependent reduction of coenzyme A disulfide [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI21389617, Length=328, Percent_Identity=27.7439024390244, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI65787454, Length=328, Percent_Identity=27.7439024390244, Blast_Score=107, Evalue=5e-23, Organism=Homo sapiens, GI226437568, Length=328, Percent_Identity=27.7439024390244, Blast_Score=107, Evalue=5e-23, Organism=Homo sapiens, GI50301238, Length=269, Percent_Identity=27.8810408921933, Blast_Score=68, Evalue=4e-11, Organism=Escherichia coli, GI1789065, Length=264, Percent_Identity=30.6818181818182, Blast_Score=118, Evalue=2e-27, Organism=Escherichia coli, GI1789765, Length=374, Percent_Identity=28.3422459893048, Blast_Score=106, Evalue=8e-24, Organism=Escherichia coli, GI1788892, Length=287, Percent_Identity=29.616724738676, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI1786307, Length=318, Percent_Identity=28.6163522012579, Blast_Score=93, Evalue=9e-20, Organism=Escherichia coli, GI87082354, Length=238, Percent_Identity=27.7310924369748, Blast_Score=83, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17559934, Length=301, Percent_Identity=25.5813953488372, Blast_Score=93, Evalue=7e-19, Organism=Drosophila melanogaster, GI281359715, Length=325, Percent_Identity=28, Blast_Score=105, Evalue=2e-22, Organism=Drosophila melanogaster, GI281359713, Length=325, Percent_Identity=28, Blast_Score=105, Evalue=2e-22, Organism=Drosophila melanogaster, GI24639250, Length=325, Percent_Identity=28, Blast_Score=105, Evalue=2e-22, Organism=Drosophila melanogaster, GI18543267, Length=325, Percent_Identity=28, Blast_Score=105, Evalue=2e-22, Organism=Drosophila melanogaster, GI24639252, Length=325, Percent_Identity=28, Blast_Score=105, Evalue=2e-22, Organism=Drosophila melanogaster, GI24639257, Length=325, Percent_Identity=28, Blast_Score=104, Evalue=3e-22, Organism=Drosophila melanogaster, GI24585130, Length=326, Percent_Identity=24.2331288343558, Blast_Score=83, Evalue=7e-16, Organism=Drosophila melanogaster, GI21358499, Length=207, Percent_Identity=34.2995169082126, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017758 - InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.14 [H]
Molecular weight: Translated: 90806; Mature: 90806
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS50206 RHODANESE_3 ; PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYIVIGGVAGGATAAARIRRNTEQAEIILFEKGEYISYANCGLPYYIGGVIAEREKLFV CEEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHCCCCEEE QTPEAFGKRFNIDVRTRSEVIAIHSADKTVDIRTSDGKTYTESYDKLLLSPGASPVRPPL ECHHHHCCEEEEEEECCCEEEEEEECCCEEEEEECCCCCHHHHHHHEEECCCCCCCCCCC PGIDNEGIFTLRNVNDTDAIKSYLQQHKVKRAVIIGAGFIGLEMAENLQEAGAEVAVVEM CCCCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCEEEHHH ANQVMAPIDFSMASLVHEHLLQKGVHLYLEKAVASFERTVNGLEVIFKSGERLPADMVLL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE SIGVRPNTSLVTEAGLEIGEMRGIKVNDYLQTSDEYIYAVGDAIEFRHPLTDRPWLNYLA EECCCCCCCHHHHCCCCHHHCCCEEECCCCCCCCCEEEEECCHHCCCCCCCCCCHHHHHC GPANRQARIVADNMVFGNKVTYEGAVGTSIAKIFDMTVAASGLPAKRLKQAGIDYLSATI CCCCCCEEEEEECEEECCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHH HSGSHAGYYPDALQMSIKITFSPVNGKLLGAQIVGYNGVDKRIDEFSQVIKHNGTVYDLM CCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEHH ALEQAYAPPFSSAKDPVAVAGYVAGNILSGKMKPLYWRELQAADLSKVTLVDVRTPDEFA HHHHHCCCCCCCCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHH LGALKGAVNIPLDDMRERMKEIPQDKPVYLYCGVGLRGYLASNILLQNGFGEVRNLIGGL HHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHEECCHHHHHHHHHHH KLYKAATAPLPKPKEFSNSGSSSSDSSKVDHSEHSKDSAEAYTIASSVIPSMKAIKVDAC HHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEC GISCPGPIMKLKKSMEELADGERLEIVATDAGFPRDAEAWCQTTGNRFVSVKSGAGKYEV CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEEECCCCCEEE IVEKSTPQSSSSEVCREDKGKTFILFSDNLDKVLATFVLANGAAATGKKVIIFFTFWGLN EEECCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHH AIKRLDKPAVKKDIWGKMFGMMLPSSSLKLRLSKMNMGGMGARMMRYIMNKKNIDSLESL HHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHH RTQAIQNGVEFIACQMSMDVMGVKREELLDHVTIGGVATYMNRAEQANVNLFI HHHHHHCCHHEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEC >Mature Secondary Structure MKYIVIGGVAGGATAAARIRRNTEQAEIILFEKGEYISYANCGLPYYIGGVIAEREKLFV CEEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHCCCCEEE QTPEAFGKRFNIDVRTRSEVIAIHSADKTVDIRTSDGKTYTESYDKLLLSPGASPVRPPL ECHHHHCCEEEEEEECCCEEEEEEECCCEEEEEECCCCCHHHHHHHEEECCCCCCCCCCC PGIDNEGIFTLRNVNDTDAIKSYLQQHKVKRAVIIGAGFIGLEMAENLQEAGAEVAVVEM CCCCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCEEEHHH ANQVMAPIDFSMASLVHEHLLQKGVHLYLEKAVASFERTVNGLEVIFKSGERLPADMVLL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE SIGVRPNTSLVTEAGLEIGEMRGIKVNDYLQTSDEYIYAVGDAIEFRHPLTDRPWLNYLA EECCCCCCCHHHHCCCCHHHCCCEEECCCCCCCCCEEEEECCHHCCCCCCCCCCHHHHHC GPANRQARIVADNMVFGNKVTYEGAVGTSIAKIFDMTVAASGLPAKRLKQAGIDYLSATI CCCCCCEEEEEECEEECCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHH HSGSHAGYYPDALQMSIKITFSPVNGKLLGAQIVGYNGVDKRIDEFSQVIKHNGTVYDLM CCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEHH ALEQAYAPPFSSAKDPVAVAGYVAGNILSGKMKPLYWRELQAADLSKVTLVDVRTPDEFA HHHHHCCCCCCCCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHH LGALKGAVNIPLDDMRERMKEIPQDKPVYLYCGVGLRGYLASNILLQNGFGEVRNLIGGL HHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHEECCHHHHHHHHHHH KLYKAATAPLPKPKEFSNSGSSSSDSSKVDHSEHSKDSAEAYTIASSVIPSMKAIKVDAC HHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEC GISCPGPIMKLKKSMEELADGERLEIVATDAGFPRDAEAWCQTTGNRFVSVKSGAGKYEV CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEEECCCCCEEE IVEKSTPQSSSSEVCREDKGKTFILFSDNLDKVLATFVLANGAAATGKKVIIFFTFWGLN EEECCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHH AIKRLDKPAVKKDIWGKMFGMMLPSSSLKLRLSKMNMGGMGARMMRYIMNKKNIDSLESL HHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHH RTQAIQNGVEFIACQMSMDVMGVKREELLDHVTIGGVATYMNRAEQANVNLFI HHHHHHCCHHEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA