| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004922
Identifier: 150004922
GI number: 150004922
Start: 3064534
End: 3066075
Strand: Reverse
Name: 150004922
Synonym: BVU_2385
Alternate gene names: NA
Gene position: 3066075-3064534 (Counterclockwise)
Preceding gene: 150004944
Following gene: 150004921
Centisome position: 59.38
GC content: 43.19
Gene sequence:
>1542_bases ATGCAAATACATAACAATACATTGATAGCGGAATGCTCGGCTTACGATTTCAAGGAAATGCTGGAACGTAAGAAAGTAAA GTCATGGCTTAAATCCGTGTCGGCATTTGCCAATACGGACGGTGGCAGTTTGTTTTATGGAGTGAATGATGACGGTGTAA TTGTAGGTTTGGAGAATCCACAAGCCGATGCTGATTTTATCAGTGAAATGATAAAGGCACGACTTGACCCTGTGCCGGAA GTTCAGCTTATTCCGATAGAACACGAAGGGCATACCTTGCTTGAAGTGAAAGTAAAGGCAGGAACGCTTACACCTTATTA CTATTATCAGGATGGGACACGTACCGCATATGTACGAGTTGGCAATGAAAGCGTGGAGTGTAATTCGCAACAGCTTCTTT CATTGGTATTGAAAGGTACGCACATGACTTGGGATTCACTGCCTACCCAAGTGGATGCCAGCAAACATTCTTTCATCATT CTCGCCAATACTTTCCGTGAGCAAACCCATCAGGAATGGAATGACAAGTATCTGGAATCATTCGGACTAGTAACTCCTGA CGGCAAACTGACCAATGCCGGATTGCTGTTTGTGGATAATTGTACCGTATTCCAATCACGTATTTTCTGTACCCGTTGGA CTGGACTCTATAAAGATGATGCCATCAGTTCCGTGGAACATCGGGCTAACCTTGTATTGCTATTGAAATACGGCATGGAC TTCATCAAGAACTATACCATGAGTGGTTGGGTGAAGATGCCGAACTATCGTCTAAACCTCCCCGACTATTCAGACCGTGC TATCTTCGAAGGATTGGTAAACCACCTTATCCATAGAGATTATACTGTGATGGGTGGTGAAGTGCATATTGACATTTACG ATGACCGTGTAGAACTGGTATCACCGGGCGCAATGCTTGACGGAACACAGATTCAAGACCGTGACATATACAAAGTGCCG TCCATGCGCCGTAACCCTGTCATTGCAGACATGTTCACACAGTTGGATTATATGGAGAAACGTGGTTCCGGTTTACGCAA AATGCGAGAGCTTACAGAGAAGCTACCCAATTTCCTGCAAGGTAAAGAGCCGCAATATCAAACGGAAGCGACTTCTTTCT ACACCACATTCTATAATTTGAACTGGGGTGACAACGGAAGAATGCCTGTTGAAGAAGTAGCCAACAGGGTAAATAGTACC CTCGAAAAGTATCCTGTAAACAAAGAAAGTTCGGTCGAAAAGTTCGGTGTAAACACAAAAGAGTTCGGTGTAAATGAAGA AAGTTCGGTCGAAAAGTTCGGTGTAAATGCGGATAAGTTCGGAGATACATCGGAAACACAGAAGAAAGTCAGTAAAACTG CACAAAAGATAATCGACCTCGTTATTTCAGATCCTTCAATCACAGCTGATAATATGGCCAACAAGATTGGTGTAACTAAA CGCGCTATAGAGAAAAATATCAAGAGCCTTAGGGGTATGGGAATTTTGGTTCACGAAGGTTCAGACAAGGCTGGTTATTG GCGCATTATTGTTAAACCATAA
Upstream 100 bases:
>100_bases AAAATCAAAAGAAAGCGATGTTTTTAACAGATTCTTCGGTTTTATCCTTACCTTTGTATATGATATTGGGATGTTATACC CGAACAACAATAAGGAAACT
Downstream 100 bases:
>100_bases ACAGAACAACAAACCTATGGAGACCTCTTTCATACCACTCTTTGCAATCATAGCCGTTTTGATTATCGCCTTTTTGCTTG CCTCTTTGCCACAGGAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent DNA Helicase; Divergent AAA Domain Protein; ATP-Dependent DNA Helicase RecG; Divergent AAA Domain-Containing Protein; Divergent AAA ATP; Restriction Gene; Xin-Antitoxin System Toxin Component Fic Family; ATP-Dependent DNA Helicase Protein; AAA-4 Family Protein; Transcription Regulator HTH/DeoR Family
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MQIHNNTLIAECSAYDFKEMLERKKVKSWLKSVSAFANTDGGSLFYGVNDDGVIVGLENPQADADFISEMIKARLDPVPE VQLIPIEHEGHTLLEVKVKAGTLTPYYYYQDGTRTAYVRVGNESVECNSQQLLSLVLKGTHMTWDSLPTQVDASKHSFII LANTFREQTHQEWNDKYLESFGLVTPDGKLTNAGLLFVDNCTVFQSRIFCTRWTGLYKDDAISSVEHRANLVLLLKYGMD FIKNYTMSGWVKMPNYRLNLPDYSDRAIFEGLVNHLIHRDYTVMGGEVHIDIYDDRVELVSPGAMLDGTQIQDRDIYKVP SMRRNPVIADMFTQLDYMEKRGSGLRKMRELTEKLPNFLQGKEPQYQTEATSFYTTFYNLNWGDNGRMPVEEVANRVNST LEKYPVNKESSVEKFGVNTKEFGVNEESSVEKFGVNADKFGDTSETQKKVSKTAQKIIDLVISDPSITADNMANKIGVTK RAIEKNIKSLRGMGILVHEGSDKAGYWRIIVKP
Sequences:
>Translated_513_residues MQIHNNTLIAECSAYDFKEMLERKKVKSWLKSVSAFANTDGGSLFYGVNDDGVIVGLENPQADADFISEMIKARLDPVPE VQLIPIEHEGHTLLEVKVKAGTLTPYYYYQDGTRTAYVRVGNESVECNSQQLLSLVLKGTHMTWDSLPTQVDASKHSFII LANTFREQTHQEWNDKYLESFGLVTPDGKLTNAGLLFVDNCTVFQSRIFCTRWTGLYKDDAISSVEHRANLVLLLKYGMD FIKNYTMSGWVKMPNYRLNLPDYSDRAIFEGLVNHLIHRDYTVMGGEVHIDIYDDRVELVSPGAMLDGTQIQDRDIYKVP SMRRNPVIADMFTQLDYMEKRGSGLRKMRELTEKLPNFLQGKEPQYQTEATSFYTTFYNLNWGDNGRMPVEEVANRVNST LEKYPVNKESSVEKFGVNTKEFGVNEESSVEKFGVNADKFGDTSETQKKVSKTAQKIIDLVISDPSITADNMANKIGVTK RAIEKNIKSLRGMGILVHEGSDKAGYWRIIVKP >Mature_513_residues MQIHNNTLIAECSAYDFKEMLERKKVKSWLKSVSAFANTDGGSLFYGVNDDGVIVGLENPQADADFISEMIKARLDPVPE VQLIPIEHEGHTLLEVKVKAGTLTPYYYYQDGTRTAYVRVGNESVECNSQQLLSLVLKGTHMTWDSLPTQVDASKHSFII LANTFREQTHQEWNDKYLESFGLVTPDGKLTNAGLLFVDNCTVFQSRIFCTRWTGLYKDDAISSVEHRANLVLLLKYGMD FIKNYTMSGWVKMPNYRLNLPDYSDRAIFEGLVNHLIHRDYTVMGGEVHIDIYDDRVELVSPGAMLDGTQIQDRDIYKVP SMRRNPVIADMFTQLDYMEKRGSGLRKMRELTEKLPNFLQGKEPQYQTEATSFYTTFYNLNWGDNGRMPVEEVANRVNST LEKYPVNKESSVEKFGVNTKEFGVNEESSVEKFGVNADKFGDTSETQKKVSKTAQKIIDLVISDPSITADNMANKIGVTK RAIEKNIKSLRGMGILVHEGSDKAGYWRIIVKP
Specific function: Unknown
COG id: COG2865
COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58203; Mature: 58203
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIHNNTLIAECSAYDFKEMLERKKVKSWLKSVSAFANTDGGSLFYGVNDDGVIVGLENP CEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCC QADADFISEMIKARLDPVPEVQLIPIEHEGHTLLEVKVKAGTLTPYYYYQDGTRTAYVRV CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCEEEEEEE GNESVECNSQQLLSLVLKGTHMTWDSLPTQVDASKHSFIILANTFREQTHQEWNDKYLES CCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH FGLVTPDGKLTNAGLLFVDNCTVFQSRIFCTRWTGLYKDDAISSVEHRANLVLLLKYGMD CCCCCCCCCEECCCEEEEECCHHHHHHEEEEECCCCCCHHHHHHHHHHCCEEEEEHHCHH FIKNYTMSGWVKMPNYRLNLPDYSDRAIFEGLVNHLIHRDYTVMGGEVHIDIYDDRVELV HHHCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHHHHCCEEEECCEEEEEEECCCEEEE SPGAMLDGTQIQDRDIYKVPSMRRNPVIADMFTQLDYMEKRGSGLRKMRELTEKLPNFLQ CCCCEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC GKEPQYQTEATSFYTTFYNLNWGDNGRMPVEEVANRVNSTLEKYPVNKESSVEKFGVNTK CCCCCCCHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHH EFGVNEESSVEKFGVNADKFGDTSETQKKVSKTAQKIIDLVISDPSITADNMANKIGVTK HCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RAIEKNIKSLRGMGILVHEGSDKAGYWRIIVKP HHHHHHHHHHCCCEEEEECCCCCCCEEEEEECC >Mature Secondary Structure MQIHNNTLIAECSAYDFKEMLERKKVKSWLKSVSAFANTDGGSLFYGVNDDGVIVGLENP CEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCC QADADFISEMIKARLDPVPEVQLIPIEHEGHTLLEVKVKAGTLTPYYYYQDGTRTAYVRV CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCEEEEEEE GNESVECNSQQLLSLVLKGTHMTWDSLPTQVDASKHSFIILANTFREQTHQEWNDKYLES CCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH FGLVTPDGKLTNAGLLFVDNCTVFQSRIFCTRWTGLYKDDAISSVEHRANLVLLLKYGMD CCCCCCCCCEECCCEEEEECCHHHHHHEEEEECCCCCCHHHHHHHHHHCCEEEEEHHCHH FIKNYTMSGWVKMPNYRLNLPDYSDRAIFEGLVNHLIHRDYTVMGGEVHIDIYDDRVELV HHHCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHHHHCCEEEECCEEEEEEECCCEEEE SPGAMLDGTQIQDRDIYKVPSMRRNPVIADMFTQLDYMEKRGSGLRKMRELTEKLPNFLQ CCCCEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC GKEPQYQTEATSFYTTFYNLNWGDNGRMPVEEVANRVNSTLEKYPVNKESSVEKFGVNTK CCCCCCCHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHH EFGVNEESSVEKFGVNADKFGDTSETQKKVSKTAQKIIDLVISDPSITADNMANKIGVTK HCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RAIEKNIKSLRGMGILVHEGSDKAGYWRIIVKP HHHHHHHHHHCCCEEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA