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The map label for this gene is araA [H]

Identifier: 150004857

GI number: 150004857

Start: 2994967

End: 2996496

Strand: Reverse

Name: araA [H]

Synonym: BVU_2320

Alternate gene names: 150004857

Gene position: 2996496-2994967 (Counterclockwise)

Preceding gene: 150004858

Following gene: 150004856

Centisome position: 58.04

GC content: 45.69

Gene sequence:

>1530_bases
ATGGAAAAAGCATTTGATCAGTATGAAGTATGGTTTGTAACAGGAGCACAGCTTCTGTACGGAGGTGACGCAGTTATAGC
AGTAGACGCTCACTCCAATGAAATGGTAAACGGACTGAACGAATCAGGGAAACTTCCTGTAAAAGTAGTATATAAAGGAA
CAGCCAACTCTTCCAAAGAAGTGGAAGCAGTGTTCAAAGCAGCCAACAACGATGAAAAATGTATCGGTGTCATCACTTGG
ATGCACACTTTCTCCCCAGCTAAAATGTGGATTCACGGTCTGCAACAGTTAAAGAAACCACTGTTACATCTACACACTCA
ATTCAATAAGGAAATTCCTTGGGATACCATGGATATGGACTTCATGAATCTGAATCAATCCGCCCATGGTGACCGCGAAT
TCGGACATATCTGTACCCGTATGCGCATCCGCCGCAAAGTAGTGGTAGGTTACTGGAAAGACGAAGACACCCAGCACAAG
ATTGCCGTTTGGATGCGCGTTTGTGCAGGTTGGGCAGACTCTCAGGATATGCTGATCATCCGTTTCGGCGATCAGATGAA
TAATGTAGCTGTAACTGACGGTGATAAAGTGGAAGCAGAACAACGTATGGGGTATCACGTAGATTACTGTCCGGCAAGCG
AACTGATGAAATACCATAAAAACATCAAGGATACAGATGTAGAGGCACTTGTAGCAACTTACTTCAACGAATACGACCAC
GATGCTTCATTAGAAGATAAATCAACCGAAGCTTATCAGAAAGTATGGAACGCTGCAAAAGCCGAATTAGCTCTTCGTGC
CATCCTTAAAGCCAAAGGCGCCAAAGGATTCACTACTAATTTTGATGATTTGGGCCAAACAGACGGCAGCTACTTCGATC
AGATTCCGGGACTGGCTTCCCAGCGTCTGATGGCTGAAGGCTACGGATTCGGTGCGGAAGGTGACTGGAAATCAGCAGCT
CTCTACCGTACCGTATGGGTGATGAACCAAGGACTTTCCAAAGGTTGTTCTTTCCTGGAAGATTACACATTGAACTTCGA
TGGTGCAAACAGTGCTATCCTGCAATCACATATGCTGGAAGTTTGCCCTCTTATCGCCGCTTCCAAACCACGTCTGGAAG
TACACTTCCTAGGCATAGGTATTCGCAAGAGCCAGACAGCCCGTCTTGTATTCACTTCAAAAGTAGGCTCAGGTTGTACC
GCCACTGTAGTAGACTTGGGTAACCGTTTCCGTCTGATCGTGAACGACGTAGAATGCATCGAGTCGAAACCGTTGCCCAA
ATTACCGGTTGCTTCCGCCCTGTGGATTCCGATGCCTAATTTCGAAGTAGGTGCAGGCGCATGGATCCTAGCAGGTGGAA
CACATCATTCTTGCTTCTCTTATGATCTGACAGCAGAATATTGGGAAGACTATGCTGAGATTGCAGGTATCGAAATGATC
CGTATCGACAAAGATACTACCATCAGCAACTTCAAGAAAGAGCTTCGCATGAACGAAGTCTACTATATGCTGAACAAAGC
ACTTTGCTAA

Upstream 100 bases:

>100_bases
ATTAATAGAAAAGCATTTCAACCGCAAACACGGCCCCAATGCCTATTATGGACAGAAATAAGAAACAAAGAAATTAATAA
CCCTTTTAAAATATAACATT

Downstream 100 bases:

>100_bases
TTCATCCATAAAGAGGGGATGTGTCAAGGCTAATAAGATTCTTGGCACATCCCACCTTATTTTATCATCATTATTGTTGT
ACCTTAAATTATAGGTTTTA

Product: L-arabinose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MEKAFDQYEVWFVTGAQLLYGGDAVIAVDAHSNEMVNGLNESGKLPVKVVYKGTANSSKEVEAVFKAANNDEKCIGVITW
MHTFSPAKMWIHGLQQLKKPLLHLHTQFNKEIPWDTMDMDFMNLNQSAHGDREFGHICTRMRIRRKVVVGYWKDEDTQHK
IAVWMRVCAGWADSQDMLIIRFGDQMNNVAVTDGDKVEAEQRMGYHVDYCPASELMKYHKNIKDTDVEALVATYFNEYDH
DASLEDKSTEAYQKVWNAAKAELALRAILKAKGAKGFTTNFDDLGQTDGSYFDQIPGLASQRLMAEGYGFGAEGDWKSAA
LYRTVWVMNQGLSKGCSFLEDYTLNFDGANSAILQSHMLEVCPLIAASKPRLEVHFLGIGIRKSQTARLVFTSKVGSGCT
ATVVDLGNRFRLIVNDVECIESKPLPKLPVASALWIPMPNFEVGAGAWILAGGTHHSCFSYDLTAEYWEDYAEIAGIEMI
RIDKDTTISNFKKELRMNEVYYMLNKALC

Sequences:

>Translated_509_residues
MEKAFDQYEVWFVTGAQLLYGGDAVIAVDAHSNEMVNGLNESGKLPVKVVYKGTANSSKEVEAVFKAANNDEKCIGVITW
MHTFSPAKMWIHGLQQLKKPLLHLHTQFNKEIPWDTMDMDFMNLNQSAHGDREFGHICTRMRIRRKVVVGYWKDEDTQHK
IAVWMRVCAGWADSQDMLIIRFGDQMNNVAVTDGDKVEAEQRMGYHVDYCPASELMKYHKNIKDTDVEALVATYFNEYDH
DASLEDKSTEAYQKVWNAAKAELALRAILKAKGAKGFTTNFDDLGQTDGSYFDQIPGLASQRLMAEGYGFGAEGDWKSAA
LYRTVWVMNQGLSKGCSFLEDYTLNFDGANSAILQSHMLEVCPLIAASKPRLEVHFLGIGIRKSQTARLVFTSKVGSGCT
ATVVDLGNRFRLIVNDVECIESKPLPKLPVASALWIPMPNFEVGAGAWILAGGTHHSCFSYDLTAEYWEDYAEIAGIEMI
RIDKDTTISNFKKELRMNEVYYMLNKALC
>Mature_509_residues
MEKAFDQYEVWFVTGAQLLYGGDAVIAVDAHSNEMVNGLNESGKLPVKVVYKGTANSSKEVEAVFKAANNDEKCIGVITW
MHTFSPAKMWIHGLQQLKKPLLHLHTQFNKEIPWDTMDMDFMNLNQSAHGDREFGHICTRMRIRRKVVVGYWKDEDTQHK
IAVWMRVCAGWADSQDMLIIRFGDQMNNVAVTDGDKVEAEQRMGYHVDYCPASELMKYHKNIKDTDVEALVATYFNEYDH
DASLEDKSTEAYQKVWNAAKAELALRAILKAKGAKGFTTNFDDLGQTDGSYFDQIPGLASQRLMAEGYGFGAEGDWKSAA
LYRTVWVMNQGLSKGCSFLEDYTLNFDGANSAILQSHMLEVCPLIAASKPRLEVHFLGIGIRKSQTARLVFTSKVGSGCT
ATVVDLGNRFRLIVNDVECIESKPLPKLPVASALWIPMPNFEVGAGAWILAGGTHHSCFSYDLTAEYWEDYAEIAGIEMI
RIDKDTTISNFKKELRMNEVYYMLNKALC

Specific function: Catalyzes the conversion of L-arabinose to L-ribulose [H]

COG id: COG2160

COG function: function code G; L-arabinose isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arabinose isomerase family [H]

Homologues:

Organism=Escherichia coli, GI1786248, Length=504, Percent_Identity=47.4206349206349, Blast_Score=478, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004216
- InterPro:   IPR009015
- InterPro:   IPR003762
- ProDom:   PD018364 [H]

Pfam domain/function: PF02610 Arabinose_Isome [H]

EC number: =5.3.1.4 [H]

Molecular weight: Translated: 57216; Mature: 57216

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKAFDQYEVWFVTGAQLLYGGDAVIAVDAHSNEMVNGLNESGKLPVKVVYKGTANSSKE
CCCCCCCEEEEEEECCEEEECCCEEEEEECCCCHHHHCCCCCCCCCEEEEEECCCCCCHH
VEAVFKAANNDEKCIGVITWMHTFSPAKMWIHGLQQLKKPLLHLHTQFNKEIPWDTMDMD
HHHHHHHCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
FMNLNQSAHGDREFGHICTRMRIRRKVVVGYWKDEDTQHKIAVWMRVCAGWADSQDMLII
HHCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEE
RFGDQMNNVAVTDGDKVEAEQRMGYHVDYCPASELMKYHKNIKDTDVEALVATYFNEYDH
EECCCCCCEEECCCCCCCHHHHCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
DASLEDKSTEAYQKVWNAAKAELALRAILKAKGAKGFTTNFDDLGQTDGSYFDQIPGLAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHCCCHHH
QRLMAEGYGFGAEGDWKSAALYRTVWVMNQGLSKGCSFLEDYTLNFDGANSAILQSHMLE
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCEECCCCCCHHHHHHHHHH
VCPLIAASKPRLEVHFLGIGIRKSQTARLVFTSKVGSGCTATVVDLGNRFRLIVNDVECI
HHHHHHCCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEECHHHH
ESKPLPKLPVASALWIPMPNFEVGAGAWILAGGTHHSCFSYDLTAEYWEDYAEIAGIEMI
CCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHCCEEEE
RIDKDTTISNFKKELRMNEVYYMLNKALC
EECCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKAFDQYEVWFVTGAQLLYGGDAVIAVDAHSNEMVNGLNESGKLPVKVVYKGTANSSKE
CCCCCCCEEEEEEECCEEEECCCEEEEEECCCCHHHHCCCCCCCCCEEEEEECCCCCCHH
VEAVFKAANNDEKCIGVITWMHTFSPAKMWIHGLQQLKKPLLHLHTQFNKEIPWDTMDMD
HHHHHHHCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
FMNLNQSAHGDREFGHICTRMRIRRKVVVGYWKDEDTQHKIAVWMRVCAGWADSQDMLII
HHCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEE
RFGDQMNNVAVTDGDKVEAEQRMGYHVDYCPASELMKYHKNIKDTDVEALVATYFNEYDH
EECCCCCCEEECCCCCCCHHHHCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
DASLEDKSTEAYQKVWNAAKAELALRAILKAKGAKGFTTNFDDLGQTDGSYFDQIPGLAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHCCCHHH
QRLMAEGYGFGAEGDWKSAALYRTVWVMNQGLSKGCSFLEDYTLNFDGANSAILQSHMLE
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCEECCCCCCHHHHHHHHHH
VCPLIAASKPRLEVHFLGIGIRKSQTARLVFTSKVGSGCTATVVDLGNRFRLIVNDVECI
HHHHHHCCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEECHHHH
ESKPLPKLPVASALWIPMPNFEVGAGAWILAGGTHHSCFSYDLTAEYWEDYAEIAGIEMI
CCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHCCEEEE
RIDKDTTISNFKKELRMNEVYYMLNKALC
EECCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]