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The map label for this gene is yoeC [H]

Identifier: 150004836

GI number: 150004836

Start: 2971606

End: 2972193

Strand: Direct

Name: yoeC [H]

Synonym: BVU_2299

Alternate gene names: 150004836

Gene position: 2971606-2972193 (Clockwise)

Preceding gene: 150004835

Following gene: 150004837

Centisome position: 57.55

GC content: 31.8

Gene sequence:

>588_bases
ATGAGTTTAAAGTATTCAAGCACTACAGCAGATTATCTAGTTTGGTCTGATGCTATGAATTTAATAAGGAAATTGGCTAA
AGATGGTAATTACAAAATTTCACTTCTTATAGCTTTGGGTTGTTTCACAGGATTGAGAATATCAGATATTTTAGCTTTGA
GATGGAAACAGATATTAAATACCAGTGAATTTACAGTAATAGAGAAAAAGACAAATAAGGTGAGAACTATTAGGATAAAT
GCCCAACTTGGGCAGCACATTAAAGAATGCTATGAACAGATAAAGCCTATAGGAATTAACTCACCTATTTTAGTGAGCCA
AAAAGGAACTGTTTTCACTATCCAGAGAATCAATGTGATACTAAAAGAGGTGAAAAAGAAGTATAAATTAAAGATTAAGA
ACTTTAGCTGTCATTCACTTAGAAAGACTTTTGGCAGACAAGTTTATAATATGAACAGTGACAATTCAGAACTAGCCTTA
GTCAAACTGATGGAACTGTTTAATCATTCCAGTGTAACTATAACTAAAAGATACTTAGGTTTAAGGCAGGAAGAACTGTT
AAATACTTATGACTGCCTAAGTTTCTAA

Upstream 100 bases:

>100_bases
GTGAATGTTTTGCTATAAATCAACACATTAGCTAATTAGCTAGTATGTTGGTAATGGTGAAACATTCACTTTTATTTATT
TACATATAAAACAGAACATT

Downstream 100 bases:

>100_bases
TCTGTTGGAATGTGACAAAGTTTGAAATTTCTGAGCTATTTACAGAGATAGAAAGTTTTGTCACATTCTGATAGTCCTAT
GCAAACCAGTTCCGAAATGA

Product: tyrosine type site-specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSLKYSSTTADYLVWSDAMNLIRKLAKDGNYKISLLIALGCFTGLRISDILALRWKQILNTSEFTVIEKKTNKVRTIRIN
AQLGQHIKECYEQIKPIGINSPILVSQKGTVFTIQRINVILKEVKKKYKLKIKNFSCHSLRKTFGRQVYNMNSDNSELAL
VKLMELFNHSSVTITKRYLGLRQEELLNTYDCLSF

Sequences:

>Translated_195_residues
MSLKYSSTTADYLVWSDAMNLIRKLAKDGNYKISLLIALGCFTGLRISDILALRWKQILNTSEFTVIEKKTNKVRTIRIN
AQLGQHIKECYEQIKPIGINSPILVSQKGTVFTIQRINVILKEVKKKYKLKIKNFSCHSLRKTFGRQVYNMNSDNSELAL
VKLMELFNHSSVTITKRYLGLRQEELLNTYDCLSF
>Mature_194_residues
SLKYSSTTADYLVWSDAMNLIRKLAKDGNYKISLLIALGCFTGLRISDILALRWKQILNTSEFTVIEKKTNKVRTIRINA
QLGQHIKECYEQIKPIGINSPILVSQKGTVFTIQRINVILKEVKKKYKLKIKNFSCHSLRKTFGRQVYNMNSDNSELALV
KLMELFNHSSVTITKRYLGLRQEELLNTYDCLSF

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 22516; Mature: 22385

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKYSSTTADYLVWSDAMNLIRKLAKDGNYKISLLIALGCFTGLRISDILALRWKQILN
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHCCCHHHHHHHHHHHHHHC
TSEFTVIEKKTNKVRTIRINAQLGQHIKECYEQIKPIGINSPILVSQKGTVFTIQRINVI
CCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEHHHHHHH
LKEVKKKYKLKIKNFSCHSLRKTFGRQVYNMNSDNSELALVKLMELFNHSSVTITKRYLG
HHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHC
LRQEELLNTYDCLSF
CCHHHHHHHHHHCCC
>Mature Secondary Structure 
SLKYSSTTADYLVWSDAMNLIRKLAKDGNYKISLLIALGCFTGLRISDILALRWKQILN
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHCCCHHHHHHHHHHHHHHC
TSEFTVIEKKTNKVRTIRINAQLGQHIKECYEQIKPIGINSPILVSQKGTVFTIQRINVI
CCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEHHHHHHH
LKEVKKKYKLKIKNFSCHSLRKTFGRQVYNMNSDNSELALVKLMELFNHSSVTITKRYLG
HHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHC
LRQEELLNTYDCLSF
CCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]