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The map label for this gene is yccF [H]

Identifier: 150004825

GI number: 150004825

Start: 2960650

End: 2961018

Strand: Direct

Name: yccF [H]

Synonym: BVU_2288

Alternate gene names: 150004825

Gene position: 2960650-2961018 (Clockwise)

Preceding gene: 150004824

Following gene: 150004829

Centisome position: 57.34

GC content: 45.8

Gene sequence:

>369_bases
ATGAACTTACTGCTCAATATTATTTGGCTGATTTGCGGCGGATTTCTGATCTGCGTGGAATATATTGTTTCCAGCCTGTT
GCTGATGATTACTATCGTCGGCATTCCTTTCGGTTTCCAGACTTTGAAGTTGTCTATGCTGGCTCTTTGTCCTTTTGGGC
GGGAAATACGCAGTTGTCCCGGTGATGGTGGATGTCTCAGTGTGTTGATGAATATCATCTGGATACTTGTAGGTGGAATC
TGGATCAGCCTCTCTCATCTGGCATTCGGGGTGTTGCTTTGCATCACTGTCATCGGCATTCCATTCGGACTGCAACATTT
CAAGCTGGCGGGTTTGGCACTTACTCCTTTCGGAAAGGAGATTGTATAA

Upstream 100 bases:

>100_bases
GAATATTTTCAACGGTTCGTTGGAAGAATTGCAATTAATGACCATAAAGAAATAAGGGAACTGTGCCTGAGGTTCCGAAA
ACTTTGCTTATATTTGCTTT

Downstream 100 bases:

>100_bases
TAAATATAATACCGATATGATCGTTTGGTCACTTTGGATAAAATGCAGCGTCCTACGTGCGTTTGTCACCGCTTGATTCC
GGTTCTAATTTTCAGGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MNLLLNIIWLICGGFLICVEYIVSSLLLMITIVGIPFGFQTLKLSMLALCPFGREIRSCPGDGGCLSVLMNIIWILVGGI
WISLSHLAFGVLLCITVIGIPFGLQHFKLAGLALTPFGKEIV

Sequences:

>Translated_122_residues
MNLLLNIIWLICGGFLICVEYIVSSLLLMITIVGIPFGFQTLKLSMLALCPFGREIRSCPGDGGCLSVLMNIIWILVGGI
WISLSHLAFGVLLCITVIGIPFGLQHFKLAGLALTPFGKEIV
>Mature_122_residues
MNLLLNIIWLICGGFLICVEYIVSSLLLMITIVGIPFGFQTLKLSMLALCPFGREIRSCPGDGGCLSVLMNIIWILVGGI
WISLSHLAFGVLLCITVIGIPFGLQHFKLAGLALTPFGKEIV

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=130, Percent_Identity=31.5384615384615, Blast_Score=73, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 13206; Mature: 13206

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLLNIIWLICGGFLICVEYIVSSLLLMITIVGIPFGFQTLKLSMLALCPFGREIRSCP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCC
GDGGCLSVLMNIIWILVGGIWISLSHLAFGVLLCITVIGIPFGLQHFKLAGLALTPFGKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEECCCCCC
IV
CC
>Mature Secondary Structure
MNLLLNIIWLICGGFLICVEYIVSSLLLMITIVGIPFGFQTLKLSMLALCPFGREIRSCP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCC
GDGGCLSVLMNIIWILVGGIWISLSHLAFGVLLCITVIGIPFGLQHFKLAGLALTPFGKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEECCCCCC
IV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]