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The map label for this gene is glaB2

Identifier: 150004820

GI number: 150004820

Start: 2955102

End: 2956919

Strand: Direct

Name: glaB2

Synonym: BVU_2283

Alternate gene names: 150004820

Gene position: 2955102-2956919 (Clockwise)

Preceding gene: 150004815

Following gene: 150004823

Centisome position: 57.23

GC content: 45.32

Gene sequence:

>1818_bases
ATGAAACGAATTATCTTTAATTTCTGCTTCGTATGGCTGGCTGTTTCCGCTTTTGCCGGAAGTAAGGTAGTCGAAATGCG
AAATTATGGTCTGGTACCGGACACACACGAGAATCTTTCACCCAAATTGCAGAAGGCGTTACAAGACATCAAGTCTCAAG
TTGCTTTGGGTGATAAGGTCACCCTGCTTTTTGAATCCGGACGTTACGATTTCCATCCTGAAGGGGCGGCTGTCCGTGAG
TATTATATTTCCAATCATGATCAGGACAATCCGAAAACGGTAGGTTTCCCTTTGGAGGATTGGAAGGGGCTGACGGTGGA
CGGACAGGGTGCCGATTTTATCTTTCATGGACGTATGCTTCCACTTTCTCTGCTTCGTTCAGAGAATTGTACTTTGCGTA
ATTTCAGCATAGATTTTGAGACTCCTCATATTGCTCAGGTCAAGATATTGGAAAGCGGAGAGGAGGGAATTACTTTTGAA
CCTGCCGCATGGGTGAAATGCCGTATCAATGAGAAAGGTTTTTTCGAAGCATACGGTGAAGGCTGGTCCAGTGCTCCCCA
GGGAGGAATTGCTTTTGAAGAAAAGACAAAGCGTCTGGTATACCGCACCAGTGACTTATGGTGTCCTATGGAAGGGGTGA
AAGAAGTTTCTCCACGTGTCTACCATGCTCCTCAATGGAAAGACGCCCGGTTGAAACCGGGGACAGTGGTGGCTCTTCGT
ACTTATTATCGTCCTGCTCCGGGTATATTCTTGTCCAATGATAAAGACACCCGTTTGCAGAATGTGAAAGTGCATTATGC
CGAAGGTATGGGACTGCTGGCCCAGTTATGTGAAAATATCACGTTGGATGAATTCAGCGTTTGCCTTCGTGGCGATAAGG
ATCCGCGTTACTTTACCACGCAGGCGGATGCTACCCATTTCTCCAGTTGCCGGGGGAAGATTGATTCTCGCAACGGGTTG
TATGAAGGAATGATGGATGATGCGATTAATGTACATGGTACTTATTTGAAAATCAAGCAACGCCTTGATGACCATACGGT
GATTGCCCGATACATGCATCCGCAAGCATACGGATTCGAATGGGGCGTGAATGGCGATGAAGTACAATTTGTACGTTCCG
CCACCATGGAACTGACCGGTGGAAAGAACCGGGTGAAGGAAATCCTGCCCAATGACAAAGATACGGTGAAAGGTGCAAAA
GAATATCGTATCACTTTTGCCGAGCCTTTGGATGCGGAGATTACGGATAAAGAAGGTTTCGGCATTGAAAACCTGTCCTG
GTGTCCGGAAGTTTATTTTGCGGATAATGTCATTCGTAATAATCGAGCACGCGGTACGCTGTTCAGCACTCCCCTGAAAA
CGGTGGTAGAGCGTAACCTGTTTGATCATACATCAGGAACAGCCATATTGCTGTGCGGTGATTGTAACGGCTGGTTTGAA
ACGGGAGCTTGCCGGAATGTGCTGATTCGTAACAATCGTTTTATCAACGCATTGACTAATATGTTCCAGTTTACGGAAGC
TGTTATCTCTATTTATCCGGAGATTCCCGATTTGGAGCATCAGAAAAAATATTTCCATGGTGGAAAAGGAGAAAAAGGAG
TAGTGATTGAAGATAACTATTTTGAAACCTTTGACCGCCCTGTACTTTTTGCAAAATCCATTGACGGATTGATCTTTAAA
AACAATGTGATCCGCCAGAATACGGATTATCCGGCTTTTCATCATAACAAATCCCGTTTCCGCTTGCTTCACACCCGGAA
TGTGAAGATAGAGAAGAATAATTTTGAGGATGGGGATGAGAGTATAGCAAGAGAATAG

Upstream 100 bases:

>100_bases
CAAAAATATCTTTTTCATGTTGTTTTCTTCTTTATTTATGGTTGCGAAGTTAGGAATTTTTGTTAGTTTTGTCATTCTAA
CTAATCTATAATGAACCTAA

Downstream 100 bases:

>100_bases
ATACAAATAACACTGATTATGCGGGTGAAAATACAATCCGCATAATCAGTGTTTTCATATCTGAAGAACTACAACGGAAG
GGTTATTCTATTTTTCCAAT

Product: ATP/GTP-binding site

Products: NA

Alternate protein names: Exo-alpha-galactosidase B2

Number of amino acids: Translated: 605; Mature: 605

Protein sequence:

>605_residues
MKRIIFNFCFVWLAVSAFAGSKVVEMRNYGLVPDTHENLSPKLQKALQDIKSQVALGDKVTLLFESGRYDFHPEGAAVRE
YYISNHDQDNPKTVGFPLEDWKGLTVDGQGADFIFHGRMLPLSLLRSENCTLRNFSIDFETPHIAQVKILESGEEGITFE
PAAWVKCRINEKGFFEAYGEGWSSAPQGGIAFEEKTKRLVYRTSDLWCPMEGVKEVSPRVYHAPQWKDARLKPGTVVALR
TYYRPAPGIFLSNDKDTRLQNVKVHYAEGMGLLAQLCENITLDEFSVCLRGDKDPRYFTTQADATHFSSCRGKIDSRNGL
YEGMMDDAINVHGTYLKIKQRLDDHTVIARYMHPQAYGFEWGVNGDEVQFVRSATMELTGGKNRVKEILPNDKDTVKGAK
EYRITFAEPLDAEITDKEGFGIENLSWCPEVYFADNVIRNNRARGTLFSTPLKTVVERNLFDHTSGTAILLCGDCNGWFE
TGACRNVLIRNNRFINALTNMFQFTEAVISIYPEIPDLEHQKKYFHGGKGEKGVVIEDNYFETFDRPVLFAKSIDGLIFK
NNVIRQNTDYPAFHHNKSRFRLLHTRNVKIEKNNFEDGDESIARE

Sequences:

>Translated_605_residues
MKRIIFNFCFVWLAVSAFAGSKVVEMRNYGLVPDTHENLSPKLQKALQDIKSQVALGDKVTLLFESGRYDFHPEGAAVRE
YYISNHDQDNPKTVGFPLEDWKGLTVDGQGADFIFHGRMLPLSLLRSENCTLRNFSIDFETPHIAQVKILESGEEGITFE
PAAWVKCRINEKGFFEAYGEGWSSAPQGGIAFEEKTKRLVYRTSDLWCPMEGVKEVSPRVYHAPQWKDARLKPGTVVALR
TYYRPAPGIFLSNDKDTRLQNVKVHYAEGMGLLAQLCENITLDEFSVCLRGDKDPRYFTTQADATHFSSCRGKIDSRNGL
YEGMMDDAINVHGTYLKIKQRLDDHTVIARYMHPQAYGFEWGVNGDEVQFVRSATMELTGGKNRVKEILPNDKDTVKGAK
EYRITFAEPLDAEITDKEGFGIENLSWCPEVYFADNVIRNNRARGTLFSTPLKTVVERNLFDHTSGTAILLCGDCNGWFE
TGACRNVLIRNNRFINALTNMFQFTEAVISIYPEIPDLEHQKKYFHGGKGEKGVVIEDNYFETFDRPVLFAKSIDGLIFK
NNVIRQNTDYPAFHHNKSRFRLLHTRNVKIEKNNFEDGDESIARE
>Mature_605_residues
MKRIIFNFCFVWLAVSAFAGSKVVEMRNYGLVPDTHENLSPKLQKALQDIKSQVALGDKVTLLFESGRYDFHPEGAAVRE
YYISNHDQDNPKTVGFPLEDWKGLTVDGQGADFIFHGRMLPLSLLRSENCTLRNFSIDFETPHIAQVKILESGEEGITFE
PAAWVKCRINEKGFFEAYGEGWSSAPQGGIAFEEKTKRLVYRTSDLWCPMEGVKEVSPRVYHAPQWKDARLKPGTVVALR
TYYRPAPGIFLSNDKDTRLQNVKVHYAEGMGLLAQLCENITLDEFSVCLRGDKDPRYFTTQADATHFSSCRGKIDSRNGL
YEGMMDDAINVHGTYLKIKQRLDDHTVIARYMHPQAYGFEWGVNGDEVQFVRSATMELTGGKNRVKEILPNDKDTVKGAK
EYRITFAEPLDAEITDKEGFGIENLSWCPEVYFADNVIRNNRARGTLFSTPLKTVVERNLFDHTSGTAILLCGDCNGWFE
TGACRNVLIRNNRFINALTNMFQFTEAVISIYPEIPDLEHQKKYFHGGKGEKGVVIEDNYFETFDRPVLFAKSIDGLIFK
NNVIRQNTDYPAFHHNKSRFRLLHTRNVKIEKNNFEDGDESIARE

Specific function: Alpha-galactosidase. Removes both branched alpha-1,3- linked galactose residues of blood group B antigens and linear alpha-1,3-linked galactose structures

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PbH1 repeats

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLAB2_BACV8 (A6L2M8)

Other databases:

- EMBL:   CP000139
- RefSeq:   YP_001299564.1
- STRING:   A6L2M8
- GeneID:   5303247
- GenomeReviews:   CP000139_GR
- KEGG:   bvu:BVU_2283
- NMPDR:   fig|435590.6.peg.2141
- eggNOG:   NOG77539
- HOGENOM:   HBG345842
- OMA:   GDESIAR
- ProtClustDB:   CLSK823424
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050
- Gene3D:   G3DSA:2.160.20.10
- SMART:   SM00710

Pfam domain/function: SSF51126 Pectin_lyas_like

EC number: =3.2.1.22

Molecular weight: Translated: 68958; Mature: 68958

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIIFNFCFVWLAVSAFAGSKVVEMRNYGLVPDTHENLSPKLQKALQDIKSQVALGDKV
CCHHHHHHHHHHHHHHHHCCCEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
TLLFESGRYDFHPEGAAVREYYISNHDQDNPKTVGFPLEDWKGLTVDGQGADFIFHGRML
EEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEECCCHHHCCCEEECCCCCCEEEECCCH
PLSLLRSENCTLRNFSIDFETPHIAQVKILESGEEGITFEPAAWVKCRINEKGFFEAYGE
HHHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCEECCCCEEEEEECCCCCHHHHCC
GWSSAPQGGIAFEEKTKRLVYRTSDLWCPMEGVKEVSPRVYHAPQWKDARLKPGTVVALR
CCCCCCCCCEEHHHHHHEEEEECCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCEEEEE
TYYRPAPGIFLSNDKDTRLQNVKVHYAEGMGLLAQLCENITLDEFSVCLRGDKDPRYFTT
EECCCCCCEEECCCCCCCEEEEEEEEECCHHHHHHHHCCCCCCHHHHEEECCCCCCEEEE
QADATHFSSCRGKIDSRNGLYEGMMDDAINVHGTYLKIKQRLDDHTVIARYMHPQAYGFE
CCCCHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEHHHCCCCEEEHHHHCCCCCCEE
WGVNGDEVQFVRSATMELTGGKNRVKEILPNDKDTVKGAKEYRITFAEPLDAEITDKEGF
ECCCCCHHHHEEHHHEEECCCHHHHHHHCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCC
GIENLSWCPEVYFADNVIRNNRARGTLFSTPLKTVVERNLFDHTSGTAILLCGDCNGWFE
CCCCCCCCCCHHCCCHHHHCCCCCCCEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
TGACRNVLIRNNRFINALTNMFQFTEAVISIYPEIPDLEHQKKYFHGGKGEKGVVIEDNY
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEECCC
FETFDRPVLFAKSIDGLIFKNNVIRQNTDYPAFHHNKSRFRLLHTRNVKIEKNNFEDGDE
HHHCCCCEEEECCCCCEEEECCEEECCCCCCCEECCCCEEEEEEECCEEEECCCCCCCHH
SIARE
HHCCC
>Mature Secondary Structure
MKRIIFNFCFVWLAVSAFAGSKVVEMRNYGLVPDTHENLSPKLQKALQDIKSQVALGDKV
CCHHHHHHHHHHHHHHHHCCCEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
TLLFESGRYDFHPEGAAVREYYISNHDQDNPKTVGFPLEDWKGLTVDGQGADFIFHGRML
EEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEECCCHHHCCCEEECCCCCCEEEECCCH
PLSLLRSENCTLRNFSIDFETPHIAQVKILESGEEGITFEPAAWVKCRINEKGFFEAYGE
HHHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCEECCCCEEEEEECCCCCHHHHCC
GWSSAPQGGIAFEEKTKRLVYRTSDLWCPMEGVKEVSPRVYHAPQWKDARLKPGTVVALR
CCCCCCCCCEEHHHHHHEEEEECCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCEEEEE
TYYRPAPGIFLSNDKDTRLQNVKVHYAEGMGLLAQLCENITLDEFSVCLRGDKDPRYFTT
EECCCCCCEEECCCCCCCEEEEEEEEECCHHHHHHHHCCCCCCHHHHEEECCCCCCEEEE
QADATHFSSCRGKIDSRNGLYEGMMDDAINVHGTYLKIKQRLDDHTVIARYMHPQAYGFE
CCCCHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEHHHCCCCEEEHHHHCCCCCCEE
WGVNGDEVQFVRSATMELTGGKNRVKEILPNDKDTVKGAKEYRITFAEPLDAEITDKEGF
ECCCCCHHHHEEHHHEEECCCHHHHHHHCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCC
GIENLSWCPEVYFADNVIRNNRARGTLFSTPLKTVVERNLFDHTSGTAILLCGDCNGWFE
CCCCCCCCCCHHCCCHHHHCCCCCCCEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
TGACRNVLIRNNRFINALTNMFQFTEAVISIYPEIPDLEHQKKYFHGGKGEKGVVIEDNY
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEECCC
FETFDRPVLFAKSIDGLIFKNNVIRQNTDYPAFHHNKSRFRLLHTRNVKIEKNNFEDGDE
HHHCCCCEEEECCCCCEEEECCEEECCCCCCCEECCCCEEEEEEECCEEEECCCCCCCHH
SIARE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA