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The map label for this gene is yafV [H]

Identifier: 150004809

GI number: 150004809

Start: 2939129

End: 2939890

Strand: Direct

Name: yafV [H]

Synonym: BVU_2272

Alternate gene names: 150004809

Gene position: 2939129-2939890 (Clockwise)

Preceding gene: 150004808

Following gene: 150004810

Centisome position: 56.92

GC content: 49.87

Gene sequence:

>762_bases
ATGAAAATAACAATTCTACAGAGAAATATAGAATGGGCCAATCCACAGGCCAATATAGCAAGGGCGGACGAAGCGATAAG
CTGTCTGCCGGATGCTGATCTGTTTGTTTTACCCGAAATGTTTTCCACCGGTTTTTGTACGCAACCCGAAGGAATTGCGG
AGAGCACCGACAGTGAAACCCTGCACTGGATGAAGCGTAAGGCAGCCGAGCGGAATTGTGCTATTGCAGGCAGTGTAGCT
GTATGTGAGAATGGAAACTATTATAATCGTTTTTACTTTGTCCATCCGGACGGAGCCGTGCAGCATTATGATAAGAAACA
TTTGTTCACCTTTGGGGGCGAACACAAGCGTTTCACTGCCGGCACAGAGCGTGTGGTGGTGAACTTCCGTGGGGTACGTA
TTCTTTTGGAGGTATGTTATGACCTCCGTTTCCCTGTTTGGTCACGCAACCTGGGGGATTACGACATGATACTTTATGTG
GCAAGCTGGCCCACTCCCCGTGTGGATGCCTGGAGCGCTCTGCTTCGGGCGCGGGCTATTGAGAACCAGTGCTATGTGGC
CGGAGTGAACCGCATGGGAACTGATCCTACCTGTGAATATTCGGGTGGCAGCGCCATCATCGATCCCTACGGAAAAACGA
TAGCCGAATGTCCGTGGAGCAGGGAAAGTGCGGTATCGGCTGATATAGATATGGAGGCATTGCAGGCTTTCAGGAAGAAA
TTCCCGGTATTGGATGATGCAGACCCTTTTACATTGATATGA

Upstream 100 bases:

>100_bases
ACATGTAAGAAAAAAGGGAGTGAAAGGAAATAGTTAGTAATAAAATGCTTGCTATCTTATTATATTTGTTACCTTTGTGG
GTCTTATAATATGAAAAACA

Downstream 100 bases:

>100_bases
AACAATTAACAAAATAATAGATAATGGCTGAAAAGAAATTATTGTTGGGCGATGAGGCAATTGCCCTCGGAGCGATACAT
GCCGGCATATCGGGTGTATA

Product: putative amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKITILQRNIEWANPQANIARADEAISCLPDADLFVLPEMFSTGFCTQPEGIAESTDSETLHWMKRKAAERNCAIAGSVA
VCENGNYYNRFYFVHPDGAVQHYDKKHLFTFGGEHKRFTAGTERVVVNFRGVRILLEVCYDLRFPVWSRNLGDYDMILYV
ASWPTPRVDAWSALLRARAIENQCYVAGVNRMGTDPTCEYSGGSAIIDPYGKTIAECPWSRESAVSADIDMEALQAFRKK
FPVLDDADPFTLI

Sequences:

>Translated_253_residues
MKITILQRNIEWANPQANIARADEAISCLPDADLFVLPEMFSTGFCTQPEGIAESTDSETLHWMKRKAAERNCAIAGSVA
VCENGNYYNRFYFVHPDGAVQHYDKKHLFTFGGEHKRFTAGTERVVVNFRGVRILLEVCYDLRFPVWSRNLGDYDMILYV
ASWPTPRVDAWSALLRARAIENQCYVAGVNRMGTDPTCEYSGGSAIIDPYGKTIAECPWSRESAVSADIDMEALQAFRKK
FPVLDDADPFTLI
>Mature_253_residues
MKITILQRNIEWANPQANIARADEAISCLPDADLFVLPEMFSTGFCTQPEGIAESTDSETLHWMKRKAAERNCAIAGSVA
VCENGNYYNRFYFVHPDGAVQHYDKKHLFTFGGEHKRFTAGTERVVVNFRGVRILLEVCYDLRFPVWSRNLGDYDMILYV
ASWPTPRVDAWSALLRARAIENQCYVAGVNRMGTDPTCEYSGGSAIIDPYGKTIAECPWSRESAVSADIDMEALQAFRKK
FPVLDDADPFTLI

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI9910460, Length=245, Percent_Identity=28.1632653061224, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1786412, Length=253, Percent_Identity=47.8260869565217, Blast_Score=242, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI17556280, Length=268, Percent_Identity=29.4776119402985, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323383, Length=267, Percent_Identity=24.7191011235955, Blast_Score=76, Evalue=5e-15,
Organism=Drosophila melanogaster, GI21355835, Length=267, Percent_Identity=28.4644194756554, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI17933642, Length=250, Percent_Identity=29.2, Blast_Score=71, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 28511; Mature: 28511

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITILQRNIEWANPQANIARADEAISCLPDADLFVLPEMFSTGFCTQPEGIAESTDSET
CEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCHHH
LHWMKRKAAERNCAIAGSVAVCENGNYYNRFYFVHPDGAVQHYDKKHLFTFGGEHKRFTA
HHHHHHHHHHCCCEEECCEEEECCCCEEEEEEEECCCCHHHHCCCCEEEEECCCCCEEEC
GTERVVVNFRGVRILLEVCYDLRFPVWSRNLGDYDMILYVASWPTPRVDAWSALLRARAI
CCEEEEEEEHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
ENQCYVAGVNRMGTDPTCEYSGGSAIIDPYGKTIAECPWSRESAVSADIDMEALQAFRKK
CCCEEEEECCCCCCCCCEEECCCCEEECCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHH
FPVLDDADPFTLI
CCCCCCCCCCCCC
>Mature Secondary Structure
MKITILQRNIEWANPQANIARADEAISCLPDADLFVLPEMFSTGFCTQPEGIAESTDSET
CEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCHHH
LHWMKRKAAERNCAIAGSVAVCENGNYYNRFYFVHPDGAVQHYDKKHLFTFGGEHKRFTA
HHHHHHHHHHCCCEEECCEEEECCCCEEEEEEEECCCCHHHHCCCCEEEEECCCCCEEEC
GTERVVVNFRGVRILLEVCYDLRFPVWSRNLGDYDMILYVASWPTPRVDAWSALLRARAI
CCEEEEEEEHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
ENQCYVAGVNRMGTDPTCEYSGGSAIIDPYGKTIAECPWSRESAVSADIDMEALQAFRKK
CCCEEEEECCCCCCCCCEEECCCCEEECCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHH
FPVLDDADPFTLI
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]