| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004805
Identifier: 150004805
GI number: 150004805
Start: 2931072
End: 2933267
Strand: Reverse
Name: 150004805
Synonym: BVU_2268
Alternate gene names: NA
Gene position: 2933267-2931072 (Counterclockwise)
Preceding gene: 150004806
Following gene: 150004802
Centisome position: 56.81
GC content: 41.17
Gene sequence:
>2196_bases ATGCGCGAAGAAATCATAAAACTATTAGACCAATATCGGTTAAAAGAAGCATTATCCCAAATGACAGGATATGCCACCCA TACTTCCGACTGGCAATTAAAGAATGAGCTAGAAGCCCTGCAAACGTCATACGACCTGATGCTGCAATATACTTCAAAAG GGATGAAAGATCCCAATAAAGTGGAAATATACCATAAAATGTTACGCACGGCATACGAACTGGCCGACCGTATCCATATA GCCGTACAGGCAACACAAAATTACGGAGCCTATTATGACACAATGCGCACTTTTGTCCAAAGCCCTCCTCACAGCTATGC CGAATTACAAATGCAATTGGAGGCGTATACAGAAGATATGGCTACAGCCCCATTGATATATACCACCGAGGCCAAAAGAA ATGAAGAAATGGATGCCATGAGAAAACGTCACGAAACAGCCGTAGACGAATTATTTGAAAAAATATGGGTATCCACCCGG TGGAGTGAATCGGAATATGCTGAAGCGCAAACTTTGTTCAACTCACTATTGATCCAAGTCAACGACCTTTCCATAATGGT CAGCGCCGTCACCATGAGCCTGCTGCAAATATTCGACATCCGCAAGTTCATGTTTCTATTGAACGCCTATACCCATCAGG ATACCATGCTGAATCAGCGGGCTATTGCAGGGATCGCACTAACATGCTACTATTATGAAAAGCGTATCCTTCAATACCCT GAAGCCGTGTCGCGCATAAATGAACTGAATGAAAATGCCGAGTTCATCAAAAACCTGCATCATATCCAGATTCAATTATT GCAATCTTCCCGTGAAACCCGAAAGATAGACAAGAAGATGCGTGAAGAAATCATTCCCGAAATGATGAAAAATCCCAAAC TTAATTTGGAAGGACTGGATGAAGATGCCGAAGATCATAATCCGGAATGGGAAGAATGGATTGACCGTTCAGGCATTACC GATAAATTGCGCGAATTAGGTGAACTGCAAATGTCCGGGGCAGATGTGTATATGAGTACCTTTTCACAGCTGAAACAATT CCCGTTTTTCCGCAAAATTTCTCACTGGTTCTATCCTTTTGACCCCCAATATCAGGATATCGCCAAATTATCTCTCGGAA ATGACGAACAAAAAATCTCTCTGCTCAACATTTTGATGAATTCGGATGTATTCTGCAATTCCGACAAATACTCTTTTTGT TTTACCATGTTACAAATGCCGGAAAGCCAAAGGAATCTCATGCAGCAACAATTGAACGGACAACATGAAGCTTCTGAAGA ACTGAAAGAACGTTTAAAAGAGATGTCACAATCAAAAGCTCGCGCTGAATTCGTGAGCCGGCAATACATTCATGACCTCT ACCGTTTCTTCAAATTATGGTCAAGAAGACATGAAATACATGACATTTTTGAGGACACTCTGGACTTATGGAATAAAGAA GCATTGTCTCAAGCCTTGTTACACAAAGAGTATATCAACAAACTGGCAGATTACCTATTCACACACGACGACTTGGCAGA AGCCGGAATTCTCTATGATAAATCAATTGAATTATACAATCGTAAAAATGCCGAATTATGGCAGAAAGCAGGTTTCATTT ATCAGAAAATCGGTTCCTATAAAAAAGCGATAGATTATTACCTGCAATCAGATCTGCTGATCCCCGATAATACATGGAAT AACCGCCATTTGGCACAATGTTATAGAAAAGAGGGAAACTACCCAAAAGCTTTGGAATATTATAACAAGGTGGAACAGGC ACAGCCCGACAGTCTGAATCTGGCACTACAAATAGGACAATGCCTGATGGCACTGGAACGATACGATGAAGCACTGGCTT ATTTCTTCAAAGTGGAGTATCTGGATAAAAAGCCACAGAATGCCCGACGCGCCATCGGATGGTGTTCCTTCATTACCGGC AACCATCAACAAGCCAAGAAATATTACGACTTGCTGATATCCGAGCCCAAGCCCATTATGGAAGACTGGATGAATGCAGG ACATGTGTATTATATCCTGAATGAAACAGAAAAATCAATAGAATATTATCGCAAAGCCCAGGAACTATGCGACAGTCATG ATGAGTTTGTCCGCCTTTACCAAATAGATAAGAAAGACTTGATAAAGCAAGGCGCCAATGAAGTAGACTTGTTTATACTT CCCGATGAATTAGGGATATTCAGTAAATGTCTCTAA
Upstream 100 bases:
>100_bases ATGGAATATATATGGAAACGGGCAACCTGGCTGAAATAAGCCAAGAACCGAAGTCTGCCCGCATTTGTTTATAAAAGACA TACAAATAGAACTTTAAAAT
Downstream 100 bases:
>100_bases AAAATAAGATGGCATATGAAGATGATAGGGCATGACCATTTCATATGCCATTCTTATTGTCATTTTTCCGTGCTTTCTCA CATACTTCTATCCGACAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Domain Protein; Tetratricopeptide Repeat Containing Protein
Number of amino acids: Translated: 731; Mature: 731
Protein sequence:
>731_residues MREEIIKLLDQYRLKEALSQMTGYATHTSDWQLKNELEALQTSYDLMLQYTSKGMKDPNKVEIYHKMLRTAYELADRIHI AVQATQNYGAYYDTMRTFVQSPPHSYAELQMQLEAYTEDMATAPLIYTTEAKRNEEMDAMRKRHETAVDELFEKIWVSTR WSESEYAEAQTLFNSLLIQVNDLSIMVSAVTMSLLQIFDIRKFMFLLNAYTHQDTMLNQRAIAGIALTCYYYEKRILQYP EAVSRINELNENAEFIKNLHHIQIQLLQSSRETRKIDKKMREEIIPEMMKNPKLNLEGLDEDAEDHNPEWEEWIDRSGIT DKLRELGELQMSGADVYMSTFSQLKQFPFFRKISHWFYPFDPQYQDIAKLSLGNDEQKISLLNILMNSDVFCNSDKYSFC FTMLQMPESQRNLMQQQLNGQHEASEELKERLKEMSQSKARAEFVSRQYIHDLYRFFKLWSRRHEIHDIFEDTLDLWNKE ALSQALLHKEYINKLADYLFTHDDLAEAGILYDKSIELYNRKNAELWQKAGFIYQKIGSYKKAIDYYLQSDLLIPDNTWN NRHLAQCYRKEGNYPKALEYYNKVEQAQPDSLNLALQIGQCLMALERYDEALAYFFKVEYLDKKPQNARRAIGWCSFITG NHQQAKKYYDLLISEPKPIMEDWMNAGHVYYILNETEKSIEYYRKAQELCDSHDEFVRLYQIDKKDLIKQGANEVDLFIL PDELGIFSKCL
Sequences:
>Translated_731_residues MREEIIKLLDQYRLKEALSQMTGYATHTSDWQLKNELEALQTSYDLMLQYTSKGMKDPNKVEIYHKMLRTAYELADRIHI AVQATQNYGAYYDTMRTFVQSPPHSYAELQMQLEAYTEDMATAPLIYTTEAKRNEEMDAMRKRHETAVDELFEKIWVSTR WSESEYAEAQTLFNSLLIQVNDLSIMVSAVTMSLLQIFDIRKFMFLLNAYTHQDTMLNQRAIAGIALTCYYYEKRILQYP EAVSRINELNENAEFIKNLHHIQIQLLQSSRETRKIDKKMREEIIPEMMKNPKLNLEGLDEDAEDHNPEWEEWIDRSGIT DKLRELGELQMSGADVYMSTFSQLKQFPFFRKISHWFYPFDPQYQDIAKLSLGNDEQKISLLNILMNSDVFCNSDKYSFC FTMLQMPESQRNLMQQQLNGQHEASEELKERLKEMSQSKARAEFVSRQYIHDLYRFFKLWSRRHEIHDIFEDTLDLWNKE ALSQALLHKEYINKLADYLFTHDDLAEAGILYDKSIELYNRKNAELWQKAGFIYQKIGSYKKAIDYYLQSDLLIPDNTWN NRHLAQCYRKEGNYPKALEYYNKVEQAQPDSLNLALQIGQCLMALERYDEALAYFFKVEYLDKKPQNARRAIGWCSFITG NHQQAKKYYDLLISEPKPIMEDWMNAGHVYYILNETEKSIEYYRKAQELCDSHDEFVRLYQIDKKDLIKQGANEVDLFIL PDELGIFSKCL >Mature_731_residues MREEIIKLLDQYRLKEALSQMTGYATHTSDWQLKNELEALQTSYDLMLQYTSKGMKDPNKVEIYHKMLRTAYELADRIHI AVQATQNYGAYYDTMRTFVQSPPHSYAELQMQLEAYTEDMATAPLIYTTEAKRNEEMDAMRKRHETAVDELFEKIWVSTR WSESEYAEAQTLFNSLLIQVNDLSIMVSAVTMSLLQIFDIRKFMFLLNAYTHQDTMLNQRAIAGIALTCYYYEKRILQYP EAVSRINELNENAEFIKNLHHIQIQLLQSSRETRKIDKKMREEIIPEMMKNPKLNLEGLDEDAEDHNPEWEEWIDRSGIT DKLRELGELQMSGADVYMSTFSQLKQFPFFRKISHWFYPFDPQYQDIAKLSLGNDEQKISLLNILMNSDVFCNSDKYSFC FTMLQMPESQRNLMQQQLNGQHEASEELKERLKEMSQSKARAEFVSRQYIHDLYRFFKLWSRRHEIHDIFEDTLDLWNKE ALSQALLHKEYINKLADYLFTHDDLAEAGILYDKSIELYNRKNAELWQKAGFIYQKIGSYKKAIDYYLQSDLLIPDNTWN NRHLAQCYRKEGNYPKALEYYNKVEQAQPDSLNLALQIGQCLMALERYDEALAYFFKVEYLDKKPQNARRAIGWCSFITG NHQQAKKYYDLLISEPKPIMEDWMNAGHVYYILNETEKSIEYYRKAQELCDSHDEFVRLYQIDKKDLIKQGANEVDLFIL PDELGIFSKCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86636; Mature: 86636
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREEIIKLLDQYRLKEALSQMTGYATHTSDWQLKNELEALQTSYDLMLQYTSKGMKDPNK CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH VEIYHKMLRTAYELADRIHIAVQATQNYGAYYDTMRTFVQSPPHSYAELQMQLEAYTEDM HHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ATAPLIYTTEAKRNEEMDAMRKRHETAVDELFEKIWVSTRWSESEYAEAQTLFNSLLIQV HCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH NDLSIMVSAVTMSLLQIFDIRKFMFLLNAYTHQDTMLNQRAIAGIALTCYYYEKRILQYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAVSRINELNENAEFIKNLHHIQIQLLQSSRETRKIDKKMREEIIPEMMKNPKLNLEGLD HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EDAEDHNPEWEEWIDRSGITDKLRELGELQMSGADVYMSTFSQLKQFPFFRKISHWFYPF CCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCC DPQYQDIAKLSLGNDEQKISLLNILMNSDVFCNSDKYSFCFTMLQMPESQRNLMQQQLNG CCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHCCCHHHHHHHHHHCC QHEASEELKERLKEMSQSKARAEFVSRQYIHDLYRFFKLWSRRHEIHDIFEDTLDLWNKE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSQALLHKEYINKLADYLFTHDDLAEAGILYDKSIELYNRKNAELWQKAGFIYQKIGSY HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEECCHHHHCCCCHHHHHHHHHHHHHHHHH KKAIDYYLQSDLLIPDNTWNNRHLAQCYRKEGNYPKALEYYNKVEQAQPDSLNLALQIGQ HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH CLMALERYDEALAYFFKVEYLDKKPQNARRAIGWCSFITGNHQQAKKYYDLLISEPKPIM HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH EDWMNAGHVYYILNETEKSIEYYRKAQELCDSHDEFVRLYQIDKKDLIKQGANEVDLFIL HHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCCCEEEEEE PDELGIFSKCL CCHHHHHHHCC >Mature Secondary Structure MREEIIKLLDQYRLKEALSQMTGYATHTSDWQLKNELEALQTSYDLMLQYTSKGMKDPNK CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH VEIYHKMLRTAYELADRIHIAVQATQNYGAYYDTMRTFVQSPPHSYAELQMQLEAYTEDM HHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ATAPLIYTTEAKRNEEMDAMRKRHETAVDELFEKIWVSTRWSESEYAEAQTLFNSLLIQV HCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH NDLSIMVSAVTMSLLQIFDIRKFMFLLNAYTHQDTMLNQRAIAGIALTCYYYEKRILQYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAVSRINELNENAEFIKNLHHIQIQLLQSSRETRKIDKKMREEIIPEMMKNPKLNLEGLD HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EDAEDHNPEWEEWIDRSGITDKLRELGELQMSGADVYMSTFSQLKQFPFFRKISHWFYPF CCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCC DPQYQDIAKLSLGNDEQKISLLNILMNSDVFCNSDKYSFCFTMLQMPESQRNLMQQQLNG CCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHCCCHHHHHHHHHHCC QHEASEELKERLKEMSQSKARAEFVSRQYIHDLYRFFKLWSRRHEIHDIFEDTLDLWNKE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSQALLHKEYINKLADYLFTHDDLAEAGILYDKSIELYNRKNAELWQKAGFIYQKIGSY HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEECCHHHHCCCCHHHHHHHHHHHHHHHHH KKAIDYYLQSDLLIPDNTWNNRHLAQCYRKEGNYPKALEYYNKVEQAQPDSLNLALQIGQ HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH CLMALERYDEALAYFFKVEYLDKKPQNARRAIGWCSFITGNHQQAKKYYDLLISEPKPIM HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH EDWMNAGHVYYILNETEKSIEYYRKAQELCDSHDEFVRLYQIDKKDLIKQGANEVDLFIL HHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCCCEEEEEE PDELGIFSKCL CCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA