| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004800
Identifier: 150004800
GI number: 150004800
Start: 2923556
End: 2924953
Strand: Reverse
Name: 150004800
Synonym: BVU_2263
Alternate gene names: NA
Gene position: 2924953-2923556 (Counterclockwise)
Preceding gene: 150004801
Following gene: 150004799
Centisome position: 56.65
GC content: 42.42
Gene sequence:
>1398_bases ATGAAGCATATACGGAGCACTTTTTTTCTTCTAACCACTTTATTTATAATGGCTTCATGTGGCGAAGACCGCAGTGGGGA ATACTATGCATTAATTGGAGAGAATGTATGGATAGAACAAATAATGAAAGAGCATTATTTGTGGTATGACAGTATTCCGG CAATAAAGGAAACGGACTATTTTGCCGAACCGGAAGACTTCCTGCAAAAATTGGTTTATACCAAGGCACAAAACGGAAAA GGAGACCCGTATTCGTATATAGAAATAAAGGACGCTTCCGATGCGGCACGTTCCTACCTGCAACGTACTTCTACTTACGG ATTTGATTTTGAATTAATGACCGATCCTACCGGAATCTCATCACACGTATTTGCCCGTATTTTATTCGTACTGCCCAATT CACCGGCCTCAGAAGCCGGATTGGAACGAGGGAACTGGATATCAGCCATTGGCAAAGAAGAACTGACCAACAATAATTAC GGATATCTGATGGAAGGCGGCAATACAACTTTCGCCAGAGAAAGCTTGGTTTTTGATGAGGAAGGCAATTCCAGCTGGAT TGCAACAGATACAGTCAAAGTAGCGGCATCACGCCCTGTAGAATTGAATCCGTTCTATATAGATACTGTATATGAGGTAT CCGGGAAAAAAATAGCCTATATGGTCTACAATGAATTCAGTACAGGCCCCAATAACCAGGCAACAGATACAGAATACAGG GAACAGATGAAACAGATATTCGCCCGGTTCAAGGGACAGTCACCCGACGCTTTTATTCTGGACTTACGCTACAATCCCGG TGGTTATTTGAGTTGTGCCACAGATTTAGGAAGTTATCTGGCACCTGCGGCAGATCTAGGGAAAGTATTTTGCACAACTT TGTATAATGACATCAGTGACCCGCAAAAAATTGATTTCCCTCTCAATACAGGACTTGCTTCCGAAAACTTGAACTTAAGC AAGCTCTACGTACTGACAAGCAAATTTACTGCATCGGCCTCAGAAGCAGTCATAAATTGTCTCCGTCCATATATAGGTAC AGAAAATGTAGTGGTAATAGGTGAAACGACTGTTGGCAAAAATGTAGCCATGGAACCATACCAAGATGAGCGTTACAACT TTATTTTATGGCCGGTTGTGGCATACGTTCTCAACTCGGCAGGACAAGCCAACTATGTAAATGGAATCACCCCCGATTTC ACATTGAGCGAACGTAACCTCATCTCCCCTCTCTACCCACTGGGAGATACCAAAGAGTATTTATTGAAGAACACCATAGC TTATATTACGACAGGAAGTATGCCCGACCTGCCACAAACAGAAGAACAAGTATCAAAAGGAAAAATTATCTATAACTCAC TGATTCGAAGAAGTATGAACGGCATACGGCTACGGTAG
Upstream 100 bases:
>100_bases TTCTTTTTTATATAAAGGTTTTTTGGATTATTTATTCCAAACCTTATCCCTACTTTAAAATAAAATCCCTAGCTTTGCAG ATCGAAAAAGGAATTAGATT
Downstream 100 bases:
>100_bases TCCGATTTATCCAGATACAACGCCCTATTTATTAAAGACCGTGTTTAATGCATTTTAAACATGGTCTTGTTTTTTCTGAA AAGAGAACTTATTAAAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxyl-Terminal Protease; S41 Family Peptidase; Periplasmic Protease; Peptidase Family S; PDZ/DHR/GLGFPeptidase S; Peptidase; Peptidase Family Protein; Peptidase Family; Carboxyl- Protease
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MKHIRSTFFLLTTLFIMASCGEDRSGEYYALIGENVWIEQIMKEHYLWYDSIPAIKETDYFAEPEDFLQKLVYTKAQNGK GDPYSYIEIKDASDAARSYLQRTSTYGFDFELMTDPTGISSHVFARILFVLPNSPASEAGLERGNWISAIGKEELTNNNY GYLMEGGNTTFARESLVFDEEGNSSWIATDTVKVAASRPVELNPFYIDTVYEVSGKKIAYMVYNEFSTGPNNQATDTEYR EQMKQIFARFKGQSPDAFILDLRYNPGGYLSCATDLGSYLAPAADLGKVFCTTLYNDISDPQKIDFPLNTGLASENLNLS KLYVLTSKFTASASEAVINCLRPYIGTENVVVIGETTVGKNVAMEPYQDERYNFILWPVVAYVLNSAGQANYVNGITPDF TLSERNLISPLYPLGDTKEYLLKNTIAYITTGSMPDLPQTEEQVSKGKIIYNSLIRRSMNGIRLR
Sequences:
>Translated_465_residues MKHIRSTFFLLTTLFIMASCGEDRSGEYYALIGENVWIEQIMKEHYLWYDSIPAIKETDYFAEPEDFLQKLVYTKAQNGK GDPYSYIEIKDASDAARSYLQRTSTYGFDFELMTDPTGISSHVFARILFVLPNSPASEAGLERGNWISAIGKEELTNNNY GYLMEGGNTTFARESLVFDEEGNSSWIATDTVKVAASRPVELNPFYIDTVYEVSGKKIAYMVYNEFSTGPNNQATDTEYR EQMKQIFARFKGQSPDAFILDLRYNPGGYLSCATDLGSYLAPAADLGKVFCTTLYNDISDPQKIDFPLNTGLASENLNLS KLYVLTSKFTASASEAVINCLRPYIGTENVVVIGETTVGKNVAMEPYQDERYNFILWPVVAYVLNSAGQANYVNGITPDF TLSERNLISPLYPLGDTKEYLLKNTIAYITTGSMPDLPQTEEQVSKGKIIYNSLIRRSMNGIRLR >Mature_465_residues MKHIRSTFFLLTTLFIMASCGEDRSGEYYALIGENVWIEQIMKEHYLWYDSIPAIKETDYFAEPEDFLQKLVYTKAQNGK GDPYSYIEIKDASDAARSYLQRTSTYGFDFELMTDPTGISSHVFARILFVLPNSPASEAGLERGNWISAIGKEELTNNNY GYLMEGGNTTFARESLVFDEEGNSSWIATDTVKVAASRPVELNPFYIDTVYEVSGKKIAYMVYNEFSTGPNNQATDTEYR EQMKQIFARFKGQSPDAFILDLRYNPGGYLSCATDLGSYLAPAADLGKVFCTTLYNDISDPQKIDFPLNTGLASENLNLS KLYVLTSKFTASASEAVINCLRPYIGTENVVVIGETTVGKNVAMEPYQDERYNFILWPVVAYVLNSAGQANYVNGITPDF TLSERNLISPLYPLGDTKEYLLKNTIAYITTGSMPDLPQTEEQVSKGKIIYNSLIRRSMNGIRLR
Specific function: Unknown
COG id: COG0793
COG function: function code M; Periplasmic protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52239; Mature: 52239
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHIRSTFFLLTTLFIMASCGEDRSGEYYALIGENVWIEQIMKEHYLWYDSIPAIKETDY CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCEECCCCCCCCCCC FAEPEDFLQKLVYTKAQNGKGDPYSYIEIKDASDAARSYLQRTSTYGFDFELMTDPTGIS CCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCH SHVFARILFVLPNSPASEAGLERGNWISAIGKEELTNNNYGYLMEGGNTTFARESLVFDE HHHHHEEEEEECCCCCHHHCCCCCCCHHHCCHHHHCCCCCEEEEECCCCCEEEEEEEEEC EGNSSWIATDTVKVAASRPVELNPFYIDTVYEVSGKKIAYMVYNEFSTGPNNQATDTEYR CCCCCEEEECEEEEECCCCEECCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHH EQMKQIFARFKGQSPDAFILDLRYNPGGYLSCATDLGSYLAPAADLGKVFCTTLYNDISD HHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCC PQKIDFPLNTGLASENLNLSKLYVLTSKFTASASEAVINCLRPYIGTENVVVIGETTVGK CCEECCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCC NVAMEPYQDERYNFILWPVVAYVLNSAGQANYVNGITPDFTLSERNLISPLYPLGDTKEY CCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHH LLKNTIAYITTGSMPDLPQTEEQVSKGKIIYNSLIRRSMNGIRLR HHHCCEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKHIRSTFFLLTTLFIMASCGEDRSGEYYALIGENVWIEQIMKEHYLWYDSIPAIKETDY CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCEECCCCCCCCCCC FAEPEDFLQKLVYTKAQNGKGDPYSYIEIKDASDAARSYLQRTSTYGFDFELMTDPTGIS CCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCH SHVFARILFVLPNSPASEAGLERGNWISAIGKEELTNNNYGYLMEGGNTTFARESLVFDE HHHHHEEEEEECCCCCHHHCCCCCCCHHHCCHHHHCCCCCEEEEECCCCCEEEEEEEEEC EGNSSWIATDTVKVAASRPVELNPFYIDTVYEVSGKKIAYMVYNEFSTGPNNQATDTEYR CCCCCEEEECEEEEECCCCEECCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHH EQMKQIFARFKGQSPDAFILDLRYNPGGYLSCATDLGSYLAPAADLGKVFCTTLYNDISD HHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCC PQKIDFPLNTGLASENLNLSKLYVLTSKFTASASEAVINCLRPYIGTENVVVIGETTVGK CCEECCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCC NVAMEPYQDERYNFILWPVVAYVLNSAGQANYVNGITPDFTLSERNLISPLYPLGDTKEY CCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHH LLKNTIAYITTGSMPDLPQTEEQVSKGKIIYNSLIRRSMNGIRLR HHHCCEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA