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The map label for this gene is pal [H]

Identifier: 150004726

GI number: 150004726

Start: 2819801

End: 2821072

Strand: Reverse

Name: pal [H]

Synonym: BVU_2187

Alternate gene names: 150004726

Gene position: 2821072-2819801 (Counterclockwise)

Preceding gene: 150004727

Following gene: 150004725

Centisome position: 54.64

GC content: 34.12

Gene sequence:

>1272_bases
ATGAAAAAACATTTATTATTGAAAACTATAGCAGCTCTTATGAGTTGCCCGAAGTACAAGTTATCTATGAAGAATAAAAA
TATGAAGAAAATATATATACATAAAATCCATCTCATACTATGCTTTACCTCAGTATTATGTTTCGGTTTACCTATAAATG
CACAACAAAATGCAAAGAATGGAGCAGCCGATAATAATAAAAAAGCATGGGAAATAGGTATAGGCGCAACCGGACTTCAA
ATGACACGTTTTAATGTCATTAATTTCCATACTAATAATAAAGGCGGTTACACTGTAGGTACTAATAAAAAAGATTTTAT
TTTTGGAGGAAATCTATATTTTGCTCGTGAACTTAACTCTCATTTTTATCTAGATTTACAAGGAACATTAGACTACAGTT
CCGATCCTGTCCGTAACGGTAAAGAATCAAGATGGCTAGGTATGGCAGGAATCGGTTTACAGTGGCGTCTAGGTGAATAT
CTCCATTCAAATTATATTGATCCTTTCCTACGGATGGGAGCCAACTATATGTACAAGAATTTTAAGATCAACTATAAGGG
GATGGAAGAATTCAACAGTGAGGAGATGGGATGGAATCTGTCAAATGATTATACTAAAGAAGGGAAAGATAAACAAAATC
TTATCCCTATTTCATTGGGAATAGGCGTGAATATGTGGCTTAATGACAACATTGGCATAGGACTCCAAGGAGACTACCTC
ATCATGCCATACAAACATATAGCCAATTCATGGCAAGGAAGCATTCGATTGATGTGGCGCATTGGTGGTAAATCCCTAAA
AGTCAAACCGGAAATTCAATATGTGGAAAAAATCATAGAAAAAGTTATAGAAAAACCTATAATCATGAAACAAATTGTAG
AAACTCCAAGCCAGCCCAATGTTTTATGTGATTTATTCAACAATATCTATTTTGAGTTTGATAAAACAGAAATAACTCCT
AAAGCAGCTACTATCATTGATGAAATAGCTCAAATTATGCTGACAGACACAAGCAAAAAATATCTCATCACAGGATGTAC
TGATGCAAAAGGATCATCACAATACAATATGGATCTATCCCAAAAACGTGCAGACGCTGTAGTCAATGCACTTATAAAGA
AAGGAGTTCCCAATAAAATGTTAAAAGCAAAAGGAGTGGGCGCAAAAATATCGTATGCATCTCAGAATGCTCCCAACGAA
ATACGAGAAGGAGATCGTAAAATTATAGTTCAAATCATTACAAATATGGATTATTGGAATTATATACCATAA

Upstream 100 bases:

>100_bases
AAAGTATTCGCACCATTTTTAAATTCATCCATATACATTGACAGTGGCAACAGTTCATATTTCTATAGATATTATCAAGG
TTATCTCCGAAAAGGAAAGG

Downstream 100 bases:

>100_bases
AAAATTTCCCCTCTATCAAAACGGCATATATTCCTATATCGTGGAATATAGCCGTTTTGCATATTCCAAAGAAAAGTTCG
AGCCATGTATACCCTCATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKKHLLLKTIAALMSCPKYKLSMKNKNMKKIYIHKIHLILCFTSVLCFGLPINAQQNAKNGAADNNKKAWEIGIGATGLQ
MTRFNVINFHTNNKGGYTVGTNKKDFIFGGNLYFARELNSHFYLDLQGTLDYSSDPVRNGKESRWLGMAGIGLQWRLGEY
LHSNYIDPFLRMGANYMYKNFKINYKGMEEFNSEEMGWNLSNDYTKEGKDKQNLIPISLGIGVNMWLNDNIGIGLQGDYL
IMPYKHIANSWQGSIRLMWRIGGKSLKVKPEIQYVEKIIEKVIEKPIIMKQIVETPSQPNVLCDLFNNIYFEFDKTEITP
KAATIIDEIAQIMLTDTSKKYLITGCTDAKGSSQYNMDLSQKRADAVVNALIKKGVPNKMLKAKGVGAKISYASQNAPNE
IREGDRKIIVQIITNMDYWNYIP

Sequences:

>Translated_423_residues
MKKHLLLKTIAALMSCPKYKLSMKNKNMKKIYIHKIHLILCFTSVLCFGLPINAQQNAKNGAADNNKKAWEIGIGATGLQ
MTRFNVINFHTNNKGGYTVGTNKKDFIFGGNLYFARELNSHFYLDLQGTLDYSSDPVRNGKESRWLGMAGIGLQWRLGEY
LHSNYIDPFLRMGANYMYKNFKINYKGMEEFNSEEMGWNLSNDYTKEGKDKQNLIPISLGIGVNMWLNDNIGIGLQGDYL
IMPYKHIANSWQGSIRLMWRIGGKSLKVKPEIQYVEKIIEKVIEKPIIMKQIVETPSQPNVLCDLFNNIYFEFDKTEITP
KAATIIDEIAQIMLTDTSKKYLITGCTDAKGSSQYNMDLSQKRADAVVNALIKKGVPNKMLKAKGVGAKISYASQNAPNE
IREGDRKIIVQIITNMDYWNYIP
>Mature_423_residues
MKKHLLLKTIAALMSCPKYKLSMKNKNMKKIYIHKIHLILCFTSVLCFGLPINAQQNAKNGAADNNKKAWEIGIGATGLQ
MTRFNVINFHTNNKGGYTVGTNKKDFIFGGNLYFARELNSHFYLDLQGTLDYSSDPVRNGKESRWLGMAGIGLQWRLGEY
LHSNYIDPFLRMGANYMYKNFKINYKGMEEFNSEEMGWNLSNDYTKEGKDKQNLIPISLGIGVNMWLNDNIGIGLQGDYL
IMPYKHIANSWQGSIRLMWRIGGKSLKVKPEIQYVEKIIEKVIEKPIIMKQIVETPSQPNVLCDLFNNIYFEFDKTEITP
KAATIIDEIAQIMLTDTSKKYLITGCTDAKGSSQYNMDLSQKRADAVVNALIKKGVPNKMLKAKGVGAKISYASQNAPNE
IREGDRKIIVQIITNMDYWNYIP

Specific function: Thought to play a role in bacterial envelope integrity. Very strongly associated with the peptidoglycan [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 48112; Mature: 48112

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHLLLKTIAALMSCPKYKLSMKNKNMKKIYIHKIHLILCFTSVLCFGLPINAQQNAKN
CCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GAADNNKKAWEIGIGATGLQMTRFNVINFHTNNKGGYTVGTNKKDFIFGGNLYFARELNS
CCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCEEECCCCCCEEEECCEEEEEECCC
HFYLDLQGTLDYSSDPVRNGKESRWLGMAGIGLQWRLGEYLHSNYIDPFLRMGANYMYKN
EEEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHCCCHHHHCCCCEEEEE
FKINYKGMEEFNSEEMGWNLSNDYTKEGKDKQNLIPISLGIGVNMWLNDNIGIGLQGDYL
EEEEECCHHHCCCHHCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCEE
IMPYKHIANSWQGSIRLMWRIGGKSLKVKPEIQYVEKIIEKVIEKPIIMKQIVETPSQPN
EECHHHHCCCCCCCEEEEEEECCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC
VLCDLFNNIYFEFDKTEITPKAATIIDEIAQIMLTDTSKKYLITGCTDAKGSSQYNMDLS
HHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCEECCCHH
QKRADAVVNALIKKGVPNKMLKAKGVGAKISYASQNAPNEIREGDRKIIVQIITNMDYWN
HHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCHHHHCCHHHEEHHHHHCCCCCC
YIP
CCC
>Mature Secondary Structure
MKKHLLLKTIAALMSCPKYKLSMKNKNMKKIYIHKIHLILCFTSVLCFGLPINAQQNAKN
CCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GAADNNKKAWEIGIGATGLQMTRFNVINFHTNNKGGYTVGTNKKDFIFGGNLYFARELNS
CCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCEEECCCCCCEEEECCEEEEEECCC
HFYLDLQGTLDYSSDPVRNGKESRWLGMAGIGLQWRLGEYLHSNYIDPFLRMGANYMYKN
EEEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHCCCHHHHCCCCEEEEE
FKINYKGMEEFNSEEMGWNLSNDYTKEGKDKQNLIPISLGIGVNMWLNDNIGIGLQGDYL
EEEEECCHHHCCCHHCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCEE
IMPYKHIANSWQGSIRLMWRIGGKSLKVKPEIQYVEKIIEKVIEKPIIMKQIVETPSQPN
EECHHHHCCCCCCCEEEEEEECCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC
VLCDLFNNIYFEFDKTEITPKAATIIDEIAQIMLTDTSKKYLITGCTDAKGSSQYNMDLS
HHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCEECCCHH
QKRADAVVNALIKKGVPNKMLKAKGVGAKISYASQNAPNEIREGDRKIIVQIITNMDYWN
HHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCHHHHCCHHHEEHHHHHCCCCCC
YIP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]