| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004709
Identifier: 150004709
GI number: 150004709
Start: 2801743
End: 2803269
Strand: Direct
Name: 150004709
Synonym: BVU_2170
Alternate gene names: NA
Gene position: 2801743-2803269 (Clockwise)
Preceding gene: 150004708
Following gene: 150004710
Centisome position: 54.26
GC content: 46.43
Gene sequence:
>1527_bases ATGATTTTGGATTATTTTAATGTAAGAAAGCTTGTTGTGGTCGCAACTGTGGCTTGGGTAGGAAGTTTTCAGCTTTGGGG ACAGTCTGTAATAAGAACCAGCAGTACCGAGAAGGCTGTCTGGCAGCAGTCTAAGGATAGGTTGAAAAGCACGGCGGAAG TATCGCCAATATTCTCTATAACGGGAAATGAAAAAGGTACCGAATGGAAAGCATGGGGAACGACTTTTAATGAACTGGAT TGGGATGCGTTGCTGATGCTGACACGTGACGAGCAGGAAGAAATTATGTACAATCTTTTCGCTCCACAAGGTGATTTGAA GTTCACACGTGGACGTATTTCTATGAACTGTAATGATTATGGCCGTTCATGGTATAGCTGTGATGAAGTGCAAGGTGACT TGGAACTACGCTATTTTAACATTGAACGCGACAAGCGTAGTATCATCCCTTTGATTCGTGCTGCACAGAAGTACAATTCG GCTCTCACCTTTTGGGCTTCTCCCTGGAGTCCGCCAAGCTGGATGAAAATAAACAATGACTATCCGGTGGTGAGCAGCCG TCATAATCATGCCAATCCGAACATAGACTATCTGCTTTACGGTAGCGTGGAAGGTATTGATGAAAACGAAATGCAATTCT TGGGAGAACGCAAAGGTAAGTTTCCGCGTCGGCTTGCCACGCAGGACTATTTCATTCAAGACCCGCGTTACTTACAGGCA TACGCCAACTATTTCTGCAAGTTTATCGATGCTTACAAAGAGCAGGGCGTAAATATTGATATGATTATCTACCAGAACGA GGCTTATAGCTATACGCCCTATCCGGGCTGTGCCTGGACGGCAGAGGGAACCGTATGTTTCAACCGGGATTATTTGGCTC CGACACTCCGTTCACGTCACCCTGAAGTGAAACTCTATTTGGGTACGTTCAATACCAATCGTCGGGACCATGTGGAGAAG ATACTATCCGACGGGGAGTTGCGTAAGAGCATAGACGGCATCGCTTTCCAATGGGAAGGCCGTGAGATATTGCCGGAAAT ACGCCGTCAATATCCCGATTACCATTACATCTGCTCGGAGAGCGAATGCGGCAACGGCAGCATGGACTGGAAAGCGGGCG AGCACACCTTTTTCCTGATCAGCGACAATGCCGGCAACGGATGCGACGAATGGTTCAACTGGAACTTCCTTCTGCCCGAC AATGGAACCAGCCCCTGGGGATGGAAACAAAATGCTTTGATTCAGGTGGACTCTAAAACACGCAAGTTCCGCTATACGGC GGAGTATTATGCGGTAAAGCACTTTACGCATTATGTAATACCGGGCAGTCGGATGATAAACTACTATCCGCAGAAAGAGA AAAAGCTGTACACTGTGGTATGGCAAACTCCGGCAGAGGATTATGTGACGGTCATCGGTAACTTTGGTGACGCGGAACAA TCCATCTCCATAGGCTTTGGAAAAAAGTTCCTCAATACAGTGGTAAAGCCCCATTCATTCAATACCTATTGTATAAATCA TAAGTAA
Upstream 100 bases:
>100_bases TTTCAATATAAAGAGCTGGAATGATGCATCTTATCGTGAATATGATTACTTTTGTCATGAATTTATCGTATGAATGAAAT CTTTTAATTAAAGCAGATTT
Downstream 100 bases:
>100_bases TTCTCATGAAAAAGTTTATATCTATATCTTTCTTCACCTGGCTGTTTGTAATGTTCAGCTATCCTCTGTTTGTAGAGGCT GCTATGCCAGAGCGGAAACA
Product: beta-glycosidase
Products: D-glucose; N-acylsphingosine
Alternate protein names: Glycoside Hydrolase Family; Glucan Endo-1 6-Beta-Glucosidase; O-Glycosyl Hydrolase Family; O-Glycosyl Hydrolase; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase; Ricin B Lectin; Glycoside Hydrolase; Lysosomal Glucosyl Ceramidase-Like Protein; Glucan EndO-1 6-Beta-Glucosidase; Beta-Glycosidase; O-Glycosyl Hydrolase Family Protein; LPXTG-Motif Cell Wall Anchor Domain Protein; Glycosyl Hydrolases Family; Endo-1 6-Beta-D-Glucanase
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MILDYFNVRKLVVVATVAWVGSFQLWGQSVIRTSSTEKAVWQQSKDRLKSTAEVSPIFSITGNEKGTEWKAWGTTFNELD WDALLMLTRDEQEEIMYNLFAPQGDLKFTRGRISMNCNDYGRSWYSCDEVQGDLELRYFNIERDKRSIIPLIRAAQKYNS ALTFWASPWSPPSWMKINNDYPVVSSRHNHANPNIDYLLYGSVEGIDENEMQFLGERKGKFPRRLATQDYFIQDPRYLQA YANYFCKFIDAYKEQGVNIDMIIYQNEAYSYTPYPGCAWTAEGTVCFNRDYLAPTLRSRHPEVKLYLGTFNTNRRDHVEK ILSDGELRKSIDGIAFQWEGREILPEIRRQYPDYHYICSESECGNGSMDWKAGEHTFFLISDNAGNGCDEWFNWNFLLPD NGTSPWGWKQNALIQVDSKTRKFRYTAEYYAVKHFTHYVIPGSRMINYYPQKEKKLYTVVWQTPAEDYVTVIGNFGDAEQ SISIGFGKKFLNTVVKPHSFNTYCINHK
Sequences:
>Translated_508_residues MILDYFNVRKLVVVATVAWVGSFQLWGQSVIRTSSTEKAVWQQSKDRLKSTAEVSPIFSITGNEKGTEWKAWGTTFNELD WDALLMLTRDEQEEIMYNLFAPQGDLKFTRGRISMNCNDYGRSWYSCDEVQGDLELRYFNIERDKRSIIPLIRAAQKYNS ALTFWASPWSPPSWMKINNDYPVVSSRHNHANPNIDYLLYGSVEGIDENEMQFLGERKGKFPRRLATQDYFIQDPRYLQA YANYFCKFIDAYKEQGVNIDMIIYQNEAYSYTPYPGCAWTAEGTVCFNRDYLAPTLRSRHPEVKLYLGTFNTNRRDHVEK ILSDGELRKSIDGIAFQWEGREILPEIRRQYPDYHYICSESECGNGSMDWKAGEHTFFLISDNAGNGCDEWFNWNFLLPD NGTSPWGWKQNALIQVDSKTRKFRYTAEYYAVKHFTHYVIPGSRMINYYPQKEKKLYTVVWQTPAEDYVTVIGNFGDAEQ SISIGFGKKFLNTVVKPHSFNTYCINHK >Mature_508_residues MILDYFNVRKLVVVATVAWVGSFQLWGQSVIRTSSTEKAVWQQSKDRLKSTAEVSPIFSITGNEKGTEWKAWGTTFNELD WDALLMLTRDEQEEIMYNLFAPQGDLKFTRGRISMNCNDYGRSWYSCDEVQGDLELRYFNIERDKRSIIPLIRAAQKYNS ALTFWASPWSPPSWMKINNDYPVVSSRHNHANPNIDYLLYGSVEGIDENEMQFLGERKGKFPRRLATQDYFIQDPRYLQA YANYFCKFIDAYKEQGVNIDMIIYQNEAYSYTPYPGCAWTAEGTVCFNRDYLAPTLRSRHPEVKLYLGTFNTNRRDHVEK ILSDGELRKSIDGIAFQWEGREILPEIRRQYPDYHYICSESECGNGSMDWKAGEHTFFLISDNAGNGCDEWFNWNFLLPD NGTSPWGWKQNALIQVDSKTRKFRYTAEYYAVKHFTHYVIPGSRMINYYPQKEKKLYTVVWQTPAEDYVTVIGNFGDAEQ SISIGFGKKFLNTVVKPHSFNTYCINHK
Specific function: Unknown
COG id: COG5520
COG function: function code M; O-Glycosyl hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI284807150, Length=476, Percent_Identity=24.7899159663866, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI54607043, Length=475, Percent_Identity=24.8421052631579, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI54607045, Length=475, Percent_Identity=24.8421052631579, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI54607047, Length=475, Percent_Identity=24.8421052631579, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI284807152, Length=420, Percent_Identity=26.1904761904762, Blast_Score=96, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17539758, Length=450, Percent_Identity=24.4444444444444, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17539756, Length=450, Percent_Identity=24.6666666666667, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI25151335, Length=450, Percent_Identity=24.6666666666667, Blast_Score=111, Evalue=7e-25, Organism=Caenorhabditis elegans, GI115532472, Length=475, Percent_Identity=24.4210526315789, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI115532470, Length=472, Percent_Identity=24.1525423728814, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17542884, Length=441, Percent_Identity=23.8095238095238, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI193204210, Length=451, Percent_Identity=23.2815964523282, Blast_Score=102, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.45
Molecular weight: Translated: 59277; Mature: 59277
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILDYFNVRKLVVVATVAWVGSFQLWGQSVIRTSSTEKAVWQQSKDRLKSTAEVSPIFSI CEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEE TGNEKGTEWKAWGTTFNELDWDALLMLTRDEQEEIMYNLFAPQGDLKFTRGRISMNCNDY CCCCCCCEEEECCCCCCCCCCEEEEEEECCCHHHHHHEEECCCCCCEEECCEEEECCHHH GRSWYSCDEVQGDLELRYFNIERDKRSIIPLIRAAQKYNSALTFWASPWSPPSWMKINND CCCCEEHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEECCC YPVVSSRHNHANPNIDYLLYGSVEGIDENEMQFLGERKGKFPRRLATQDYFIQDPRYLQA CCCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHCCCCEEECCCHHHHH YANYFCKFIDAYKEQGVNIDMIIYQNEAYSYTPYPGCAWTAEGTVCFNRDYLAPTLRSRH HHHHHHHHHHHHHHCCCEEEEEEEECCCEEECCCCCEEEECCCEEEECCCCCCHHHHCCC PEVKLYLGTFNTNRRDHVEKILSDGELRKSIDGIAFQWEGREILPEIRRQYPDYHYICSE CEEEEEEEECCCCCHHHHHHHHCCCHHHHHHCCEEEEECCHHHHHHHHHHCCCEEEEECC SECGNGSMDWKAGEHTFFLISDNAGNGCDEWFNWNFLLPDNGTSPWGWKQNALIQVDSKT CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCEEEECCCCCCCCCCCCCCEEEECCCC RKFRYTAEYYAVKHFTHYVIPGSRMINYYPQKEKKLYTVVWQTPAEDYVTVIGNFGDAEQ CEEEEEHHHEEEEHEEEEEECCCCEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCC SISIGFGKKFLNTVVKPHSFNTYCINHK EEEECCCHHHHHHHCCCCCCCEEEECCC >Mature Secondary Structure MILDYFNVRKLVVVATVAWVGSFQLWGQSVIRTSSTEKAVWQQSKDRLKSTAEVSPIFSI CEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEE TGNEKGTEWKAWGTTFNELDWDALLMLTRDEQEEIMYNLFAPQGDLKFTRGRISMNCNDY CCCCCCCEEEECCCCCCCCCCEEEEEEECCCHHHHHHEEECCCCCCEEECCEEEECCHHH GRSWYSCDEVQGDLELRYFNIERDKRSIIPLIRAAQKYNSALTFWASPWSPPSWMKINND CCCCEEHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEECCC YPVVSSRHNHANPNIDYLLYGSVEGIDENEMQFLGERKGKFPRRLATQDYFIQDPRYLQA CCCEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHCCCCEEECCCHHHHH YANYFCKFIDAYKEQGVNIDMIIYQNEAYSYTPYPGCAWTAEGTVCFNRDYLAPTLRSRH HHHHHHHHHHHHHHCCCEEEEEEEECCCEEECCCCCEEEECCCEEEECCCCCCHHHHCCC PEVKLYLGTFNTNRRDHVEKILSDGELRKSIDGIAFQWEGREILPEIRRQYPDYHYICSE CEEEEEEEECCCCCHHHHHHHHCCCHHHHHHCCEEEEECCHHHHHHHHHHCCCEEEEECC SECGNGSMDWKAGEHTFFLISDNAGNGCDEWFNWNFLLPDNGTSPWGWKQNALIQVDSKT CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCEEEECCCCCCCCCCCCCCEEEECCCC RKFRYTAEYYAVKHFTHYVIPGSRMINYYPQKEKKLYTVVWQTPAEDYVTVIGNFGDAEQ CEEEEEHHHEEEEHEEEEEECCCCEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCC SISIGFGKKFLNTVVKPHSFNTYCINHK EEEECCCHHHHHHHCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-glucosyl-N-acylsphingosine; H2O
Specific reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA