| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004655
Identifier: 150004655
GI number: 150004655
Start: 2736845
End: 2738362
Strand: Reverse
Name: 150004655
Synonym: BVU_2116
Alternate gene names: NA
Gene position: 2738362-2736845 (Counterclockwise)
Preceding gene: 150004656
Following gene: 150004653
Centisome position: 53.04
GC content: 43.68
Gene sequence:
>1518_bases ATGCAGGAAACTCGCCTTATGGAAAACGAATATTCCGTCAATCTACCGACCAAATTCTGGTACAGAGGGAAGACTTACAA CGGATTTATCAACCTTGTTAATATTTTTCGAGCGACAATGATATTGGGAACACCGGGCAGCGGGAAGTCCTATGCCATTG TCAACCAGTTTATAAAGCAGACTATAGAGAAATCCTATGCGCTCTATATATATGATTTTAAGTTTGATGACCTGTCGGTT ATCGCTTATAACCATCTGCTCAAGTACAGATACCGCTATAAGGTTCCACCTAAATTTTATGTGATCAATTTCGATAATCC GAGGAAAAGCCACCGTTGTAATCCATTGGCACCGGAACTGATGACGGATATTTCAGATGCTTACGAATCGTCGTACACCA TCATGCTCAACCTCAATAAGTCGTGGGTGCAAAAGCAGGGGGACTTCTTCGTGGAATCCCCGATTGTCTTGTTTACGGCG ATAATATGGTTTTTGAAAATCTATGAAGGTGGCAAGTTCTGTACGTTCCCACATGCTATTGAATTGCTTAATAAAAGGTA TGAAGACGTCTTTACCATTCTGACAAGTTATCCCGATTTGGAGAACTATCTCAGCCCGTTCATTGACGCATGGAAAGGCG GAGCGAGTGAGCAGCTCCAGGGCCAGATTGCAAGCGCTAAAATCCCGTTATCCAGACTGATAAGTCCGCAACTCTATTGG GTAATGTCCGGCAGTGATTTTACGTTGGATATTAATAATCCCAAAGAACCGAAAGTATTATGTGTGGGCAACAATCCCGA TAGAATTTCAATCTATGGAGCAGCACTGGGACTCTATAACTCCCGTATTGTTAAGCTGATAAATAAGAAGAAACAACTGA AAAGTTGTGTGATTATTGACGAGTTACCGACCATCTTCTTTAAAGGTCTGGATAATCTGATTGCCACGGCACGAAGCAAC AAGGTCGCGGTTGTGTTAGGTTTTCAGGATTTCAGCCAGTTAAAGCGCGACTACGGAGACAAGGAGGCCGCCGTAATTAT GTCAACTGTGGGCAATGTTTTTAGCGGTCAGGTAGTGGGTGAAACGGCCAAAACCTTGTCGGAAAGATTTGGGAAAATCC TGCAAAAAAGAGAGTCCATGAGCATCAACCGCAACGATACGTCCACTTCCATCAACACGCAACTGGACAGTCTGATACCT GCATCCAAAATCAGTACACTCTCGCAAGGTATGTTTGTCGGTGCCGTAGCAGACAACTTCGGAGAGACAATAGAACAGAA AATTTTCCATGCGCAGATAGTTGTTGACAATGAAGCCGTACAGAAAGAGACGGCGGCCTACCAGCCCATACCCGAAATCA GCAGTTTTCTGGACGAGAACGGTAACGATACAATGGAGCAGCAGATACAGGCCAACTATCGGCAAATCAAACAGGATATT GTTGAATTGGTGGAGAACGAACTGATCCGCATAGAGAACGACCCGGAACTCAAATATTTATTGAACAATGAAATGTAA
Upstream 100 bases:
>100_bases CGGCGGCTTTTTCAGTCTGTTGGCATCAGGATTGTGGATAAGCCGTCTGTTGAAGAACAATTTACTGGAGGACGTTTTCA ATACTGAGAATGAATCGTTC
Downstream 100 bases:
>100_bases CTATAGTATTTCAATAAACTAACAACTTACGGTAACTATAATATTTATTTAGTATTAATATTATAGTTACCGTAATATTA TTAACAAATAGTTTGATACA
Product: putative mobilization protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MQETRLMENEYSVNLPTKFWYRGKTYNGFINLVNIFRATMILGTPGSGKSYAIVNQFIKQTIEKSYALYIYDFKFDDLSV IAYNHLLKYRYRYKVPPKFYVINFDNPRKSHRCNPLAPELMTDISDAYESSYTIMLNLNKSWVQKQGDFFVESPIVLFTA IIWFLKIYEGGKFCTFPHAIELLNKRYEDVFTILTSYPDLENYLSPFIDAWKGGASEQLQGQIASAKIPLSRLISPQLYW VMSGSDFTLDINNPKEPKVLCVGNNPDRISIYGAALGLYNSRIVKLINKKKQLKSCVIIDELPTIFFKGLDNLIATARSN KVAVVLGFQDFSQLKRDYGDKEAAVIMSTVGNVFSGQVVGETAKTLSERFGKILQKRESMSINRNDTSTSINTQLDSLIP ASKISTLSQGMFVGAVADNFGETIEQKIFHAQIVVDNEAVQKETAAYQPIPEISSFLDENGNDTMEQQIQANYRQIKQDI VELVENELIRIENDPELKYLLNNEM
Sequences:
>Translated_505_residues MQETRLMENEYSVNLPTKFWYRGKTYNGFINLVNIFRATMILGTPGSGKSYAIVNQFIKQTIEKSYALYIYDFKFDDLSV IAYNHLLKYRYRYKVPPKFYVINFDNPRKSHRCNPLAPELMTDISDAYESSYTIMLNLNKSWVQKQGDFFVESPIVLFTA IIWFLKIYEGGKFCTFPHAIELLNKRYEDVFTILTSYPDLENYLSPFIDAWKGGASEQLQGQIASAKIPLSRLISPQLYW VMSGSDFTLDINNPKEPKVLCVGNNPDRISIYGAALGLYNSRIVKLINKKKQLKSCVIIDELPTIFFKGLDNLIATARSN KVAVVLGFQDFSQLKRDYGDKEAAVIMSTVGNVFSGQVVGETAKTLSERFGKILQKRESMSINRNDTSTSINTQLDSLIP ASKISTLSQGMFVGAVADNFGETIEQKIFHAQIVVDNEAVQKETAAYQPIPEISSFLDENGNDTMEQQIQANYRQIKQDI VELVENELIRIENDPELKYLLNNEM >Mature_505_residues MQETRLMENEYSVNLPTKFWYRGKTYNGFINLVNIFRATMILGTPGSGKSYAIVNQFIKQTIEKSYALYIYDFKFDDLSV IAYNHLLKYRYRYKVPPKFYVINFDNPRKSHRCNPLAPELMTDISDAYESSYTIMLNLNKSWVQKQGDFFVESPIVLFTA IIWFLKIYEGGKFCTFPHAIELLNKRYEDVFTILTSYPDLENYLSPFIDAWKGGASEQLQGQIASAKIPLSRLISPQLYW VMSGSDFTLDINNPKEPKVLCVGNNPDRISIYGAALGLYNSRIVKLINKKKQLKSCVIIDELPTIFFKGLDNLIATARSN KVAVVLGFQDFSQLKRDYGDKEAAVIMSTVGNVFSGQVVGETAKTLSERFGKILQKRESMSINRNDTSTSINTQLDSLIP ASKISTLSQGMFVGAVADNFGETIEQKIFHAQIVVDNEAVQKETAAYQPIPEISSFLDENGNDTMEQQIQANYRQIKQDI VELVENELIRIENDPELKYLLNNEM
Specific function: Unknown
COG id: COG3505
COG function: function code U; Type IV secretory pathway, VirD4 components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57559; Mature: 57559
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQETRLMENEYSVNLPTKFWYRGKTYNGFINLVNIFRATMILGTPGSGKSYAIVNQFIKQ CCCCCCCCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHH TIEKSYALYIYDFKFDDLSVIAYNHLLKYRYRYKVPPKFYVINFDNPRKSHRCNPLAPEL HHCCCEEEEEEEEECCCCHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCHHH MTDISDAYESSYTIMLNLNKSWVQKQGDFFVESPIVLFTAIIWFLKIYEGGKFCTFPHAI HHHHHHHHCCCEEEEEECCHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCEECCHHHH ELLNKRYEDVFTILTSYPDLENYLSPFIDAWKGGASEQLQGQIASAKIPLSRLISPQLYW HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCHHHHCCCEEEE VMSGSDFTLDINNPKEPKVLCVGNNPDRISIYGAALGLYNSRIVKLINKKKQLKSCVIID EEECCEEEEECCCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEHH ELPTIFFKGLDNLIATARSNKVAVVLGFQDFSQLKRDYGDKEAAVIMSTVGNVFSGQVVG HHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHH ETAKTLSERFGKILQKRESMSINRNDTSTSINTQLDSLIPASKISTLSQGMFVGAVADNF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCEEEHHHHHH GETIEQKIFHAQIVVDNEAVQKETAAYQPIPEISSFLDENGNDTMEQQIQANYRQIKQDI HHHHHHHHHEEEEEECCHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VELVENELIRIENDPELKYLLNNEM HHHHHCCEEEECCCCCEEEEECCCC >Mature Secondary Structure MQETRLMENEYSVNLPTKFWYRGKTYNGFINLVNIFRATMILGTPGSGKSYAIVNQFIKQ CCCCCCCCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHH TIEKSYALYIYDFKFDDLSVIAYNHLLKYRYRYKVPPKFYVINFDNPRKSHRCNPLAPEL HHCCCEEEEEEEEECCCCHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCHHH MTDISDAYESSYTIMLNLNKSWVQKQGDFFVESPIVLFTAIIWFLKIYEGGKFCTFPHAI HHHHHHHHCCCEEEEEECCHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCEECCHHHH ELLNKRYEDVFTILTSYPDLENYLSPFIDAWKGGASEQLQGQIASAKIPLSRLISPQLYW HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCHHHHCCCEEEE VMSGSDFTLDINNPKEPKVLCVGNNPDRISIYGAALGLYNSRIVKLINKKKQLKSCVIID EEECCEEEEECCCCCCCEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEHH ELPTIFFKGLDNLIATARSNKVAVVLGFQDFSQLKRDYGDKEAAVIMSTVGNVFSGQVVG HHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHH ETAKTLSERFGKILQKRESMSINRNDTSTSINTQLDSLIPASKISTLSQGMFVGAVADNF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCEEEHHHHHH GETIEQKIFHAQIVVDNEAVQKETAAYQPIPEISSFLDENGNDTMEQQIQANYRQIKQDI HHHHHHHHHEEEEEECCHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VELVENELIRIENDPELKYLLNNEM HHHHHCCEEEECCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA