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The map label for this gene is xerC [H]

Identifier: 150004634

GI number: 150004634

Start: 2710586

End: 2711809

Strand: Direct

Name: xerC [H]

Synonym: BVU_2095

Alternate gene names: 150004634

Gene position: 2710586-2711809 (Clockwise)

Preceding gene: 150004630

Following gene: 150004635

Centisome position: 52.5

GC content: 40.11

Gene sequence:

>1224_bases
ATGGAAAGAACAACATTTTGTCTATTGTTCTACATTCGTAGGACGAAATTGAATCGGAACGGTGAGGCTCCGATAATGAT
GAGAATTACAGTGAATGGAGTCCGGGTTGATGCTTCAGTGAAGAAAACAATTTTTCCGGAGTTCTGGAGTGCGGCAAAAG
GAAAGGCTTTGGAAAAGAAACGGGAGTACAAGGAACTGAATTTGTATCTTGACTCAATCCGCTTACGGATAATGAAGATT
CAGCGTGAATTGGAGATAGAGGGTGTATCCGTTTCTGCCAATAGTGTCCTGGAGCGTTTCTTGGGTAAGGATGCTCCCGT
ACAGCGTACTTTGTTTGAGGTCTTTCGGGAACATAATGATAAATGTGCTCAATTGTCTGGTACGGACATGGCACCTGCAA
CTGTACAGCGTTATGAAACATCTTTGAAACATACCCAGGATTTTGTTTGGGAAACATATCATAAAAAAGACATTCTTTTG
GGAGATGTTTCCCGTCAGTTTATTGAGGATTATGAGTTCTGGCTGAAGACAGAGAAAAAGTGTTGTCACAATACTGCTAC
TAAATATCTAAAGAACTTCAAGAAGATAATCCGTATAGCTTTGGCTAAGGGATGGATGAAGAATGATCCATTTTCTGAAA
TAAAGTTCTCACTGGATAAAGTAGAACCGGATTTTTTGGAAGATTCGGAGATTCAAAAACTGATTTCAAAGGAGATTGAT
ATTCCACGGTTGGGTCAGGTGCGTGATGTTTTTGTGTTCTGTTGCTTCACAGGTTTGGCTTTCTCGGATATTCATGATTT
GAAAAAGGAACACATAGTAGAGGATTCGAACGGTGCCAAATGGATACGCAAAGGGAGACAGAAAACCAAAATTATGTGTA
ATATTCCATTGATGGAAGTGCCTTTGAAGATCCTAGGAAAGTATTCCACTAATGAATATTGTAAAAGTCGCGGTGTGCTT
TTTCCTGTTCTTTGTAATCAAAAGATGAATGCGTATCTCAAGGAATTAGCTGATATTTGTGGCATTAAGAAAACATTGAC
GACTCATGTGGCCCGTCATACTTTCGCAACGTTTGCTTTGGCAAATGGTGTTTCCATTGAGAGTGTTGCTAAAATGTTGG
GGCATACCAATGTTCAGATGACCCGTCATTATGCACGTGTGTTAGACCGTACGGTGATACGTGAGATGTCGCAGGTCAGA
ATGGATTTTCAATTATCTCTGTAA

Upstream 100 bases:

>100_bases
CAGGTACACCTATTTGGTGAATAATTCATTGTTTATTAGTATTTTGCATCTTGACTTGTTGCTCTTAGAAATTTAGTTTT
GTGATTAAAAAACAAGTAAG

Downstream 100 bases:

>100_bases
TGTGATTATAGAGTAAGTTTGTATTATATTTTTCTGTTTCTTCTTATCAAAAGATTCTTTTTAAGCATATTCTTATAATT
GTGAAATAGCCGGAATTACC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MERTTFCLLFYIRRTKLNRNGEAPIMMRITVNGVRVDASVKKTIFPEFWSAAKGKALEKKREYKELNLYLDSIRLRIMKI
QRELEIEGVSVSANSVLERFLGKDAPVQRTLFEVFREHNDKCAQLSGTDMAPATVQRYETSLKHTQDFVWETYHKKDILL
GDVSRQFIEDYEFWLKTEKKCCHNTATKYLKNFKKIIRIALAKGWMKNDPFSEIKFSLDKVEPDFLEDSEIQKLISKEID
IPRLGQVRDVFVFCCFTGLAFSDIHDLKKEHIVEDSNGAKWIRKGRQKTKIMCNIPLMEVPLKILGKYSTNEYCKSRGVL
FPVLCNQKMNAYLKELADICGIKKTLTTHVARHTFATFALANGVSIESVAKMLGHTNVQMTRHYARVLDRTVIREMSQVR
MDFQLSL

Sequences:

>Translated_407_residues
MERTTFCLLFYIRRTKLNRNGEAPIMMRITVNGVRVDASVKKTIFPEFWSAAKGKALEKKREYKELNLYLDSIRLRIMKI
QRELEIEGVSVSANSVLERFLGKDAPVQRTLFEVFREHNDKCAQLSGTDMAPATVQRYETSLKHTQDFVWETYHKKDILL
GDVSRQFIEDYEFWLKTEKKCCHNTATKYLKNFKKIIRIALAKGWMKNDPFSEIKFSLDKVEPDFLEDSEIQKLISKEID
IPRLGQVRDVFVFCCFTGLAFSDIHDLKKEHIVEDSNGAKWIRKGRQKTKIMCNIPLMEVPLKILGKYSTNEYCKSRGVL
FPVLCNQKMNAYLKELADICGIKKTLTTHVARHTFATFALANGVSIESVAKMLGHTNVQMTRHYARVLDRTVIREMSQVR
MDFQLSL
>Mature_407_residues
MERTTFCLLFYIRRTKLNRNGEAPIMMRITVNGVRVDASVKKTIFPEFWSAAKGKALEKKREYKELNLYLDSIRLRIMKI
QRELEIEGVSVSANSVLERFLGKDAPVQRTLFEVFREHNDKCAQLSGTDMAPATVQRYETSLKHTQDFVWETYHKKDILL
GDVSRQFIEDYEFWLKTEKKCCHNTATKYLKNFKKIIRIALAKGWMKNDPFSEIKFSLDKVEPDFLEDSEIQKLISKEID
IPRLGQVRDVFVFCCFTGLAFSDIHDLKKEHIVEDSNGAKWIRKGRQKTKIMCNIPLMEVPLKILGKYSTNEYCKSRGVL
FPVLCNQKMNAYLKELADICGIKKTLTTHVARHTFATFALANGVSIESVAKMLGHTNVQMTRHYARVLDRTVIREMSQVR
MDFQLSL

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG4974

COG function: function code L; Site-specific recombinase XerD

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 47293; Mature: 47293

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTTFCLLFYIRRTKLNRNGEAPIMMRITVNGVRVDASVKKTIFPEFWSAAKGKALEKK
CCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEECCHHHHHHCHHHHHHHCCHHHHHH
REYKELNLYLDSIRLRIMKIQRELEIEGVSVSANSVLERFLGKDAPVQRTLFEVFREHND
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHCCCCCHHHHHHHHHHHCCC
KCAQLSGTDMAPATVQRYETSLKHTQDFVWETYHKKDILLGDVSRQFIEDYEFWLKTEKK
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
CCHNTATKYLKNFKKIIRIALAKGWMKNDPFSEIKFSLDKVEPDFLEDSEIQKLISKEID
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
IPRLGQVRDVFVFCCFTGLAFSDIHDLKKEHIVEDSNGAKWIRKGRQKTKIMCNIPLMEV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHCEEEECCCHHHH
PLKILGKYSTNEYCKSRGVLFPVLCNQKMNAYLKELADICGIKKTLTTHVARHTFATFAL
HHHHHCCCCCHHHHHHCCCEEEHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
ANGVSIESVAKMLGHTNVQMTRHYARVLDRTVIREMSQVRMDFQLSL
HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MERTTFCLLFYIRRTKLNRNGEAPIMMRITVNGVRVDASVKKTIFPEFWSAAKGKALEKK
CCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEECCHHHHHHCHHHHHHHCCHHHHHH
REYKELNLYLDSIRLRIMKIQRELEIEGVSVSANSVLERFLGKDAPVQRTLFEVFREHND
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHCCCCCHHHHHHHHHHHCCC
KCAQLSGTDMAPATVQRYETSLKHTQDFVWETYHKKDILLGDVSRQFIEDYEFWLKTEKK
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
CCHNTATKYLKNFKKIIRIALAKGWMKNDPFSEIKFSLDKVEPDFLEDSEIQKLISKEID
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
IPRLGQVRDVFVFCCFTGLAFSDIHDLKKEHIVEDSNGAKWIRKGRQKTKIMCNIPLMEV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHCEEEECCCHHHH
PLKILGKYSTNEYCKSRGVLFPVLCNQKMNAYLKELADICGIKKTLTTHVARHTFATFAL
HHHHHCCCCCHHHHHHCCCEEEHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
ANGVSIESVAKMLGHTNVQMTRHYARVLDRTVIREMSQVRMDFQLSL
HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA