Click here to switch to the map view.

The map label for this gene is 150004619

Identifier: 150004619

GI number: 150004619

Start: 2692722

End: 2694257

Strand: Reverse

Name: 150004619

Synonym: BVU_2078

Alternate gene names: NA

Gene position: 2694257-2692722 (Counterclockwise)

Preceding gene: 150004620

Following gene: 150004618

Centisome position: 52.18

GC content: 42.77

Gene sequence:

>1536_bases
ATGATAACAACGGTAATAATAGCAATTGTGTGTTTCGCTGTAGGTGGTGGCCTATCATACATGCTTTTCAGATATGGCCT
GAAATCTAAGTATGACATCATCATCAAAGAGGCACAGACGGAAGCTGAAGTAATTAAAAAGAACAAGCTTTTGGAAGTAA
AAGAAAAATTCCTGAACAAAAAAGCTGATCTGGAAAAAGAAGTCGCCCTACGTAACCAAAAGATTCAGCAAGCCGAAAAT
AAATTAAAACAACGCGAACTGATGTTGAACCAAAAACAGGAAGAGGTTCAACGCAAACGTACAGAAGCGGAAGCTATCAA
AGAAAATCTAGAAGCTCAAATTGTCATCATAGACAAGAAAAAGGATGAACTGGATAAATTACAAATGCAAGAACGTGAAA
AACTGGAAGCTCTTTCCGGTCTTTCTGCTGAGGAGGCCAAAGAACGCCTGATTGAATCTTTGAAAGAAGAAGCGAAAACA
CAGGCTGCTTCCTATATTAACGACATTATGGACGACGCCAAATTAACAGCTAATAAAGAAGCTAAACGTATCGTTATCCA
GTCTATCCAACGAGTAGCCACAGAAACTGCTATCGAAAACTCTGTAACCGTATTCCATATTGAATCGGACGAAATAAAGG
GACGCATCATCGGCCGTGAAGGGCGTAATATCCGGGCTTTAGAAGCAGCAACCGGTGTCGAAATCGTTGTAGATGACACC
CCCGAGGCTATTGTACTTTCAGCGTTTGACCCTGTACGCCGCGAAATTGCCCGCTTAGCATTACACCAACTGGTTACAGA
TGGACGTATCCACCCGGCACGCATTGAAGAAGTGGTAGCTAAAGTACGCAAACAGGTAGAAGAAGAAATTATTGAAACCG
GTAAACGTACCACTATTGATTTAGGTATTCATGGCCTGCACCCTGAATTGATCCGTATTATCGGTAAGATGAAATATCGG
TCCTCATACGGTCAGAACCTTCTACAACATGCTCGTGAAACAGCCAATCTTTGCGCTGTGATGGCTTCTGAACTAGGTTT
GAATCCTAAAAAAGCAAAACGTGCCGGATTACTGCATGATATAGGTAAAGTACCTGATGAAGAACCGGAATTGCCGCACG
CATTGTTAGGCATGAAGATAGCCGAAAAATATAAAGAGAAACCAGACATATGTAATGCTATCGGTGCTCACCATGACGAA
ACTGAAATGACTAGCCTGCTGGCTCCCATCGTACAGGTATGTGATGCCATTTCAGGCGCACGTCCAGGCGCTCGCCGTGA
AATCGTAGAAGCTTATATCAAGCGTTTGAACGATCTAGAACAATTAGCCATGTCTTATCCAGGGGTAACAAAAACCTATG
CCATCCAAGCTGGCCGCGAATTACGTGTGATTGTAGGTGCCGACAAGATTGACGACAAACAGACTGAAAGTTTATCCGGT
GAAATTGCGAAAAAGATTCAAGACGAAATGACTTATCCGGGACAAGTGAAGATTACAGTCATCCGCGAAACACGTGCGGT
AAGTTTCGCCAAATAA

Upstream 100 bases:

>100_bases
TCGTTTAGAATTGAAGATATTCACGCACAGCTATACTGTTAAGAGAAGGGTTCTTAACAGATAGATTGTGCGTTTTTTAT
TTATATATAAATTAATAACA

Downstream 100 bases:

>100_bases
AAATCAGAAACAAGAAACTCAACTATAATCCCTCTTTTTCTTTAGAAGAAAGAGGGATTTTTCATTTTGTATTCCCACAT
TTTATCCACAGTCTGGACAA

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MITTVIIAIVCFAVGGGLSYMLFRYGLKSKYDIIIKEAQTEAEVIKKNKLLEVKEKFLNKKADLEKEVALRNQKIQQAEN
KLKQRELMLNQKQEEVQRKRTEAEAIKENLEAQIVIIDKKKDELDKLQMQEREKLEALSGLSAEEAKERLIESLKEEAKT
QAASYINDIMDDAKLTANKEAKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVAKVRKQVEEEIIETGKRTTIDLGIHGLHPELIRIIGKMKYR
SSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHDIGKVPDEEPELPHALLGMKIAEKYKEKPDICNAIGAHHDE
TEMTSLLAPIVQVCDAISGARPGARREIVEAYIKRLNDLEQLAMSYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK

Sequences:

>Translated_511_residues
MITTVIIAIVCFAVGGGLSYMLFRYGLKSKYDIIIKEAQTEAEVIKKNKLLEVKEKFLNKKADLEKEVALRNQKIQQAEN
KLKQRELMLNQKQEEVQRKRTEAEAIKENLEAQIVIIDKKKDELDKLQMQEREKLEALSGLSAEEAKERLIESLKEEAKT
QAASYINDIMDDAKLTANKEAKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVAKVRKQVEEEIIETGKRTTIDLGIHGLHPELIRIIGKMKYR
SSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHDIGKVPDEEPELPHALLGMKIAEKYKEKPDICNAIGAHHDE
TEMTSLLAPIVQVCDAISGARPGARREIVEAYIKRLNDLEQLAMSYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
>Mature_511_residues
MITTVIIAIVCFAVGGGLSYMLFRYGLKSKYDIIIKEAQTEAEVIKKNKLLEVKEKFLNKKADLEKEVALRNQKIQQAEN
KLKQRELMLNQKQEEVQRKRTEAEAIKENLEAQIVIIDKKKDELDKLQMQEREKLEALSGLSAEEAKERLIESLKEEAKT
QAASYINDIMDDAKLTANKEAKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVAKVRKQVEEEIIETGKRTTIDLGIHGLHPELIRIIGKMKYR
SSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHDIGKVPDEEPELPHALLGMKIAEKYKEKPDICNAIGAHHDE
TEMTSLLAPIVQVCDAISGARPGARREIVEAYIKRLNDLEQLAMSYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA [H]

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1 [H]

EC number: =3.1.4.16 [H]

Molecular weight: Translated: 57325; Mature: 57325

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTVIIAIVCFAVGGGLSYMLFRYGLKSKYDIIIKEAQTEAEVIKKNKLLEVKEKFLNK
CHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCH
KADLEKEVALRNQKIQQAENKLKQRELMLNQKQEEVQRKRTEAEAIKENLEAQIVIIDKK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
KDELDKLQMQEREKLEALSGLSAEEAKERLIESLKEEAKTQAASYINDIMDDAKLTANKE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCEEEEECCCCCEEEECCC
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVAKVRKQVEEEIIETGKRTTID
CCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IGKVPDEEPELPHALLGMKIAEKYKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
HHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
RPGARREIVEAYIKRLNDLEQLAMSYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCEEEEEECCCCCCCHHHHHHHH
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
HHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MITTVIIAIVCFAVGGGLSYMLFRYGLKSKYDIIIKEAQTEAEVIKKNKLLEVKEKFLNK
CHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCH
KADLEKEVALRNQKIQQAENKLKQRELMLNQKQEEVQRKRTEAEAIKENLEAQIVIIDKK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
KDELDKLQMQEREKLEALSGLSAEEAKERLIESLKEEAKTQAASYINDIMDDAKLTANKE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCEEEEECCCCCEEEECCC
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVAKVRKQVEEEIIETGKRTTID
CCEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IGKVPDEEPELPHALLGMKIAEKYKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
HHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
RPGARREIVEAYIKRLNDLEQLAMSYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCEEEEEECCCCCCCHHHHHHHH
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
HHHHHHHHHCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA