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The map label for this gene is ydiF [H]

Identifier: 150004575

GI number: 150004575

Start: 2630357

End: 2632300

Strand: Direct

Name: ydiF [H]

Synonym: BVU_2032

Alternate gene names: 150004575

Gene position: 2630357-2632300 (Clockwise)

Preceding gene: 150004574

Following gene: 150004576

Centisome position: 50.94

GC content: 42.59

Gene sequence:

>1944_bases
ATGGTTTCAGTAGATAATTTGAAAGTAGAGTTTGGAGTAACGCCTCTGTTTGAGGATGTGTCATACGTTATCAATAAGAG
AGATCGTATTGCGCTGGTCGGGAAGAATGGGGCCGGTAAGTCTACTATGCTTAAGATATTGGCAGGAATACAGGCGCCTA
CTTCAGGTAGTGTTTCTGTTCCGCGTGATGTGACGATAGGCTATCTGCCTCAAGTCATGATTCTGAGTGATAAACATACT
GTGATGGAAGAGGCGGAGATGGCTTTTGAACATATCTTTGACTTGCAGGCTAGTATTGAGAGAATGAATCAGGAGTTGGC
GGATAGAACAGATTATGATTCAGAAAACTATCATAAACTGATTGAGAAATTCACCCATGACAATGAACGCTTTTTGATGA
TGGGAGGTACCAATTATACAGCTGAGATAGAACGTACATTGATGGGGTTGGGATTTAGCCGGGAGGATTTTAACCGTCCT
ACATCTGAGTTCAGTGGTGGATGGCGTATGCGTATAGAGTTGGCCAAGTTGCTGTTGCGACGGCCCGATGTGTTGCTGTT
GGACGAGCCTACCAATCATCTGGATATAGAAAGCATTCAATGGTTGGAAAACTTTTTGAAGACAAGTGCGGGAGCCGTTG
TATTGGTGAGCCACGACCGTGCATTTATTAATAATGTGACCAATCGTACGATTGAAATATCTTGCGGGCATATCTATGAT
TATAAAGTGGCTTACGATGAGTTTGTGGTATTGCGCAAAGAACGTCGTGAGCAGCAATTGCGTGCATACGAGAACCAGCA
GAAGCAAATTCAGGATACGGAAGATTTCATAGAGCGTTTCCGTTATAAGGCTACCAAGGCTGTACAGGTGCAGAGCCGCA
TCAAGCAATTGGAAAAAATAGTTCCTATTGAAATTGATGATGAAGATAATTCAGCCTTGCGGTTGAAGTTTCCGCCTGCC
ATGCGTTCCGGCAATTATCCGGTCATTTGTGACGGGGTGAAGAAAGCATATGGCAGTCATATCGTTTTTCACGATGTGAC
TTTGACTATTAATCGAGGTGAGAAGGTGGCTTTTGTCGGAAAGAATGGGGAAGGTAAGTCCACTTTGGTGAAATGTATAA
TGGACGAAATCCCATACGAAGGTAAACTGACCATCGGGCACAACGTACAGATTGGTTATTTTGCTCAGAATCAGGCTCAG
ATGTTGGATGAAAATCTGAGTGTCTTTGATACGATTGATTATGTGGCAAAAGGGGATATTCGTTTGAAGATTCGTGATAT
TCTGGGAGCATTCATGTTTGGAGGTGAGGCTTCTGATAAAAAAGTAAAGGTACTGTCGGGTGGGGAGCGGAGTCGTCTTG
CCATGATAAAACTTTTGTTAGAACCGGTGAATTTCCTTATTTTGGACGAACCTACCAACCATCTGGATATGCGCTCAAAG
GATGTATTGAAAGAAGCTATCAAGGAATTTGATGGAACGGTGATTGTTGTTTCTCATGACCGTGAGTTCTTGGATGGACT
GGTGACCAAAGTTTATGAATTCGGAGGTGGAGTAGTAAAAGAACACATTGGCGGCATTTATGATTTTTTACAGAAAAAGA
AAATAGAGAGTCTGAATGAGTTGCAGCTTTCGGCTTCTCCTACTGTGTCTGCCACTAAAAAGGAAGAACCCGAAACGGTT
AGTGAGAACAAATTATCTTATGAGGCGCAAAAGGAATTGAATAAGAAAATTCGCAAATTGGAGAAACGAATTGCGGATTG
TGAACAGAAAATAGAAAAGCTGGAAACTGAGATTGGCGAGGTGGAAGCTGATATGGCTACTCCCGAAGGTGCATCGGATA
TGGCTTTGTATGAAAAGCATCAGAAACTGAAAAAGGACTTGGATCAGACGGTAGAAGAATGGGAGACCGTTTCTATGGAA
TTAGAAGAGATGCAGGGAAGTTAA

Upstream 100 bases:

>100_bases
ATTTGTTAAGGATGAGGACTTTTTTTATTTACTTGTATTTTGTCTTTTTTACATATAAAACCGTATATTTGTTGCCACTT
TTGCAAAAGGATAAAAACGA

Downstream 100 bases:

>100_bases
AGTATGTATCATATATATAGAATAAATGAAAGCAAAACATTATTTACCAATGGCTGTATTGGCTCTGGCAGTAGCTGCCG
GATGCGACAGTAAAAAGGAA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 647; Mature: 647

Protein sequence:

>647_residues
MVSVDNLKVEFGVTPLFEDVSYVINKRDRIALVGKNGAGKSTMLKILAGIQAPTSGSVSVPRDVTIGYLPQVMILSDKHT
VMEEAEMAFEHIFDLQASIERMNQELADRTDYDSENYHKLIEKFTHDNERFLMMGGTNYTAEIERTLMGLGFSREDFNRP
TSEFSGGWRMRIELAKLLLRRPDVLLLDEPTNHLDIESIQWLENFLKTSAGAVVLVSHDRAFINNVTNRTIEISCGHIYD
YKVAYDEFVVLRKERREQQLRAYENQQKQIQDTEDFIERFRYKATKAVQVQSRIKQLEKIVPIEIDDEDNSALRLKFPPA
MRSGNYPVICDGVKKAYGSHIVFHDVTLTINRGEKVAFVGKNGEGKSTLVKCIMDEIPYEGKLTIGHNVQIGYFAQNQAQ
MLDENLSVFDTIDYVAKGDIRLKIRDILGAFMFGGEASDKKVKVLSGGERSRLAMIKLLLEPVNFLILDEPTNHLDMRSK
DVLKEAIKEFDGTVIVVSHDREFLDGLVTKVYEFGGGVVKEHIGGIYDFLQKKKIESLNELQLSASPTVSATKKEEPETV
SENKLSYEAQKELNKKIRKLEKRIADCEQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTVEEWETVSME
LEEMQGS

Sequences:

>Translated_647_residues
MVSVDNLKVEFGVTPLFEDVSYVINKRDRIALVGKNGAGKSTMLKILAGIQAPTSGSVSVPRDVTIGYLPQVMILSDKHT
VMEEAEMAFEHIFDLQASIERMNQELADRTDYDSENYHKLIEKFTHDNERFLMMGGTNYTAEIERTLMGLGFSREDFNRP
TSEFSGGWRMRIELAKLLLRRPDVLLLDEPTNHLDIESIQWLENFLKTSAGAVVLVSHDRAFINNVTNRTIEISCGHIYD
YKVAYDEFVVLRKERREQQLRAYENQQKQIQDTEDFIERFRYKATKAVQVQSRIKQLEKIVPIEIDDEDNSALRLKFPPA
MRSGNYPVICDGVKKAYGSHIVFHDVTLTINRGEKVAFVGKNGEGKSTLVKCIMDEIPYEGKLTIGHNVQIGYFAQNQAQ
MLDENLSVFDTIDYVAKGDIRLKIRDILGAFMFGGEASDKKVKVLSGGERSRLAMIKLLLEPVNFLILDEPTNHLDMRSK
DVLKEAIKEFDGTVIVVSHDREFLDGLVTKVYEFGGGVVKEHIGGIYDFLQKKKIESLNELQLSASPTVSATKKEEPETV
SENKLSYEAQKELNKKIRKLEKRIADCEQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTVEEWETVSME
LEEMQGS
>Mature_647_residues
MVSVDNLKVEFGVTPLFEDVSYVINKRDRIALVGKNGAGKSTMLKILAGIQAPTSGSVSVPRDVTIGYLPQVMILSDKHT
VMEEAEMAFEHIFDLQASIERMNQELADRTDYDSENYHKLIEKFTHDNERFLMMGGTNYTAEIERTLMGLGFSREDFNRP
TSEFSGGWRMRIELAKLLLRRPDVLLLDEPTNHLDIESIQWLENFLKTSAGAVVLVSHDRAFINNVTNRTIEISCGHIYD
YKVAYDEFVVLRKERREQQLRAYENQQKQIQDTEDFIERFRYKATKAVQVQSRIKQLEKIVPIEIDDEDNSALRLKFPPA
MRSGNYPVICDGVKKAYGSHIVFHDVTLTINRGEKVAFVGKNGEGKSTLVKCIMDEIPYEGKLTIGHNVQIGYFAQNQAQ
MLDENLSVFDTIDYVAKGDIRLKIRDILGAFMFGGEASDKKVKVLSGGERSRLAMIKLLLEPVNFLILDEPTNHLDMRSK
DVLKEAIKEFDGTVIVVSHDREFLDGLVTKVYEFGGGVVKEHIGGIYDFLQKKKIESLNELQLSASPTVSATKKEEPETV
SENKLSYEAQKELNKKIRKLEKRIADCEQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTVEEWETVSME
LEEMQGS

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=534, Percent_Identity=34.2696629213483, Blast_Score=298, Evalue=1e-80,
Organism=Homo sapiens, GI10947137, Length=553, Percent_Identity=31.2839059674503, Blast_Score=241, Evalue=2e-63,
Organism=Homo sapiens, GI27881506, Length=525, Percent_Identity=32.1904761904762, Blast_Score=241, Evalue=2e-63,
Organism=Homo sapiens, GI69354671, Length=542, Percent_Identity=29.8892988929889, Blast_Score=199, Evalue=1e-50,
Organism=Homo sapiens, GI10947135, Length=542, Percent_Identity=29.8892988929889, Blast_Score=198, Evalue=1e-50,
Organism=Escherichia coli, GI1789751, Length=654, Percent_Identity=32.1100917431193, Blast_Score=350, Evalue=2e-97,
Organism=Escherichia coli, GI1787041, Length=538, Percent_Identity=34.2007434944238, Blast_Score=319, Evalue=3e-88,
Organism=Escherichia coli, GI1787182, Length=659, Percent_Identity=31.2594840667678, Blast_Score=272, Evalue=4e-74,
Organism=Escherichia coli, GI2367384, Length=506, Percent_Identity=33.596837944664, Blast_Score=271, Evalue=1e-73,
Organism=Escherichia coli, GI87081834, Length=234, Percent_Identity=26.9230769230769, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1788165, Length=177, Percent_Identity=31.0734463276836, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87081709, Length=187, Percent_Identity=28.8770053475936, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI87081791, Length=188, Percent_Identity=27.1276595744681, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787164, Length=184, Percent_Identity=30.9782608695652, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790467, Length=207, Percent_Identity=29.951690821256, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788761, Length=194, Percent_Identity=26.8041237113402, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789873, Length=245, Percent_Identity=26.1224489795918, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1789962, Length=232, Percent_Identity=25.4310344827586, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1786563, Length=180, Percent_Identity=27.2222222222222, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1787500, Length=223, Percent_Identity=23.7668161434978, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=554, Percent_Identity=33.2129963898917, Blast_Score=280, Evalue=1e-75,
Organism=Caenorhabditis elegans, GI17555318, Length=542, Percent_Identity=31.1808118081181, Blast_Score=238, Evalue=9e-63,
Organism=Caenorhabditis elegans, GI17559834, Length=545, Percent_Identity=29.9082568807339, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17510237, Length=299, Percent_Identity=25.0836120401338, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6321121, Length=520, Percent_Identity=34.4230769230769, Blast_Score=285, Evalue=1e-77,
Organism=Saccharomyces cerevisiae, GI6320874, Length=511, Percent_Identity=31.3111545988258, Blast_Score=228, Evalue=3e-60,
Organism=Saccharomyces cerevisiae, GI6323278, Length=403, Percent_Identity=24.5657568238213, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6325030, Length=267, Percent_Identity=29.9625468164794, Blast_Score=117, Evalue=7e-27,
Organism=Saccharomyces cerevisiae, GI6324314, Length=402, Percent_Identity=24.6268656716418, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24666836, Length=538, Percent_Identity=33.8289962825279, Blast_Score=292, Evalue=5e-79,
Organism=Drosophila melanogaster, GI24642252, Length=556, Percent_Identity=32.0143884892086, Blast_Score=262, Evalue=5e-70,
Organism=Drosophila melanogaster, GI18859989, Length=556, Percent_Identity=32.0143884892086, Blast_Score=262, Evalue=5e-70,
Organism=Drosophila melanogaster, GI24641342, Length=564, Percent_Identity=30.3191489361702, Blast_Score=241, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 73594; Mature: 73594

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVDNLKVEFGVTPLFEDVSYVINKRDRIALVGKNGAGKSTMLKILAGIQAPTSGSVSV
CCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
PRDVTIGYLPQVMILSDKHTVMEEAEMAFEHIFDLQASIERMNQELADRTDYDSENYHKL
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IEKFTHDNERFLMMGGTNYTAEIERTLMGLGFSREDFNRPTSEFSGGWRMRIELAKLLLR
HHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHCCCCHHHHCCCEEEHHHHHHHHHC
RPDVLLLDEPTNHLDIESIQWLENFLKTSAGAVVLVSHDRAFINNVTNRTIEISCGHIYD
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCEEEEEECEEEE
YKVAYDEFVVLRKERREQQLRAYENQQKQIQDTEDFIERFRYKATKAVQVQSRIKQLEKI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPIEIDDEDNSALRLKFPPAMRSGNYPVICDGVKKAYGSHIVFHDVTLTINRGEKVAFVG
CCEEECCCCCCEEEEECCCCCCCCCCCEEECCHHHHCCCEEEEEEEEEEEECCCEEEEEE
KNGEGKSTLVKCIMDEIPYEGKLTIGHNVQIGYFAQNQAQMLDENLSVFDTIDYVAKGDI
CCCCCHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCHHHHHHCCCHHHHHHHHHHCCCE
RLKIRDILGAFMFGGEASDKKVKVLSGGERSRLAMIKLLLEPVNFLILDEPTNHLDMRSK
EEEHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHH
DVLKEAIKEFDGTVIVVSHDREFLDGLVTKVYEFGGGVVKEHIGGIYDFLQKKKIESLNE
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LQLSASPTVSATKKEEPETVSENKLSYEAQKELNKKIRKLEKRIADCEQKIEKLETEIGE
HEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEADMATPEGASDMALYEKHQKLKKDLDQTVEEWETVSMELEEMQGS
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSVDNLKVEFGVTPLFEDVSYVINKRDRIALVGKNGAGKSTMLKILAGIQAPTSGSVSV
CCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
PRDVTIGYLPQVMILSDKHTVMEEAEMAFEHIFDLQASIERMNQELADRTDYDSENYHKL
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IEKFTHDNERFLMMGGTNYTAEIERTLMGLGFSREDFNRPTSEFSGGWRMRIELAKLLLR
HHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHCCCCHHHHCCCEEEHHHHHHHHHC
RPDVLLLDEPTNHLDIESIQWLENFLKTSAGAVVLVSHDRAFINNVTNRTIEISCGHIYD
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCEEEEEECEEEE
YKVAYDEFVVLRKERREQQLRAYENQQKQIQDTEDFIERFRYKATKAVQVQSRIKQLEKI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPIEIDDEDNSALRLKFPPAMRSGNYPVICDGVKKAYGSHIVFHDVTLTINRGEKVAFVG
CCEEECCCCCCEEEEECCCCCCCCCCCEEECCHHHHCCCEEEEEEEEEEEECCCEEEEEE
KNGEGKSTLVKCIMDEIPYEGKLTIGHNVQIGYFAQNQAQMLDENLSVFDTIDYVAKGDI
CCCCCHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCHHHHHHCCCHHHHHHHHHHCCCE
RLKIRDILGAFMFGGEASDKKVKVLSGGERSRLAMIKLLLEPVNFLILDEPTNHLDMRSK
EEEHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHH
DVLKEAIKEFDGTVIVVSHDREFLDGLVTKVYEFGGGVVKEHIGGIYDFLQKKKIESLNE
HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LQLSASPTVSATKKEEPETVSENKLSYEAQKELNKKIRKLEKRIADCEQKIEKLETEIGE
HEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEADMATPEGASDMALYEKHQKLKKDLDQTVEEWETVSMELEEMQGS
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]