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The map label for this gene is yagH [C]

Identifier: 150004533

GI number: 150004533

Start: 2567008

End: 2568672

Strand: Reverse

Name: yagH [C]

Synonym: BVU_1983

Alternate gene names: 150004533

Gene position: 2568672-2567008 (Counterclockwise)

Preceding gene: 150004534

Following gene: 150004532

Centisome position: 49.75

GC content: 47.03

Gene sequence:

>1665_bases
ATGAAACGACTAATCACTCTCTGTCTGCTAGGAGGCTGTTTTTTATCTGCTCCCGCACAGAATTATGTATCCCAAGCCTG
GGTGGCCGACCAAGGCAATGGGACCTACAAAAATCCAGTCCTGTATGCGGATTACTCCGATCCGGACGTTTGCCGTGTAG
GAGACGATTATTATTTGACCTCATCCAGTTTCAACTGTCTGCCCGGTTTACAAATATTACACTCCAAAGACCTTGTCAAC
TGGACTATCATAGGTGCGGCTGTACCCTACGCACTGCCCCCTGTTACCGATGTCCGTCCTGAACATGGCAACCGTGTATG
GGCACCCAGTATCCGCCACCATAACGGTGAATTCTATATATTCTGGGGTGACCCGGACCAAGGAGCATTCATGGTGAAAG
CCAAAGATCCGAAAGGTCCCTGGAGCGAGCCAGTTTTGGTGAAAGCCGGAAAGGGCATCATCGACACGACTCCATTATGG
GATGATGACGGTCGTGTATATCTGGTTCACGCTTATGCAGGAAGCCGGGCCGGACTGAAAAGTGTAATTACAATTTGTGA
GCTAAGTGCTGATGCAAGTAAAGCTATCACACAATCCCGTATCATTTTCGATGGTCATGAAGCACATCAGACTTGTGAAG
GGCCCAAATTCTATAAACGTAATGGATACTATTACATCTTCCATCCGGCAGGCGGCGTTCCTACAGGATGGCAAGTCGTA
CTTCGCTCAAAAAACGTATACGGTCCATACGAATGGAAAACAGTATTAGCGCAAGGCAACTCTCCCGTCAACGGACCTCA
TCAGGGAGGCTGGGTGGACACCCCTACGGGAGAAGACTGGTTCATGCACTTCCAGGACGTAGGTGCTTACGGACGCCTGG
TTCACCTGCAACCTATGAAATGGGTTGATGATTGGCCCGTCATAGGTATTGATAAAGACGGAGACGGCTGTGGCGAACCT
GTTCTGACTTATAAAAAGCCTAATGTAGGTAAGAACTATCCTATTTGTACTCCGCAGGAAAGTGACGAGTTTGATGGTTA
TACATTGTCTCCTCAATGGCAATGGCAGGCTAACATCAATGAAAAATGGGCTTATTTCAACGGAGGAGAAGGATTTGTAC
GTCTATACTCCTACCCGGTTCCCGAAGATTATAAGAGTTTATGGGATGTTTCTAATCTGATGCTACAAAAGACTCCGGCT
CCCAATTTCACTGCCACCACCAAGCTTACTTTCAAGCCGACAGAAAAATATAAAGGTGAACGTACGGGACTGGTTGTAAT
GGGAATGGATTATGCCGGATTAGTTGTTGAAAACACAGACAACGGACTCGTCCTGTCACAAGTGGAATGCCTGAAAGCCG
ATCGAGGGGGTACTGAAAAAGTAAATGCTTCCGTTCCCTTAAAAGACGGCACAATCTATCTTCGCGCTAAATTTTCCGCA
AAAGGAGACAAGATTAAAGCCAGTGAAGGCGGTCACGACCTGTTAGTGAAATGTAACCTCAGTTACAGTACGGACGGCAA
GAAATTCCAGCCATTAGGAGAAACTTTCCAAGTAAAAGAAGGTAAATGGATAGGAGCCAAGGTAGGTATCTTCTGTACGC
GCCCCGCTATTGTAACCAATGACGGAGGATGGACGGACGCTGACTGGTTCAGAATTGAAAAATAA

Upstream 100 bases:

>100_bases
GGATTTAAAGATATGAAAGACTGGTTCAATTATCTTCCCCAATGGAGAAAAGAATTGGAACATCCTTGCAAAATTACGAT
TAAATAAAAAATCTAAAACC

Downstream 100 bases:

>100_bases
AGAAGATATTCTATATACATTGTACTTTTTGCATTTTTATTTGATGTAAATCGCACATTTTGCCGGTTAAATTCCTAATT
TTGTGCCATAAAAGGCATCT

Product: beta-xylosidase/alpha-L-arabinofuranosidase

Products: NA

Alternate protein names: 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MKRLITLCLLGGCFLSAPAQNYVSQAWVADQGNGTYKNPVLYADYSDPDVCRVGDDYYLTSSSFNCLPGLQILHSKDLVN
WTIIGAAVPYALPPVTDVRPEHGNRVWAPSIRHHNGEFYIFWGDPDQGAFMVKAKDPKGPWSEPVLVKAGKGIIDTTPLW
DDDGRVYLVHAYAGSRAGLKSVITICELSADASKAITQSRIIFDGHEAHQTCEGPKFYKRNGYYYIFHPAGGVPTGWQVV
LRSKNVYGPYEWKTVLAQGNSPVNGPHQGGWVDTPTGEDWFMHFQDVGAYGRLVHLQPMKWVDDWPVIGIDKDGDGCGEP
VLTYKKPNVGKNYPICTPQESDEFDGYTLSPQWQWQANINEKWAYFNGGEGFVRLYSYPVPEDYKSLWDVSNLMLQKTPA
PNFTATTKLTFKPTEKYKGERTGLVVMGMDYAGLVVENTDNGLVLSQVECLKADRGGTEKVNASVPLKDGTIYLRAKFSA
KGDKIKASEGGHDLLVKCNLSYSTDGKKFQPLGETFQVKEGKWIGAKVGIFCTRPAIVTNDGGWTDADWFRIEK

Sequences:

>Translated_554_residues
MKRLITLCLLGGCFLSAPAQNYVSQAWVADQGNGTYKNPVLYADYSDPDVCRVGDDYYLTSSSFNCLPGLQILHSKDLVN
WTIIGAAVPYALPPVTDVRPEHGNRVWAPSIRHHNGEFYIFWGDPDQGAFMVKAKDPKGPWSEPVLVKAGKGIIDTTPLW
DDDGRVYLVHAYAGSRAGLKSVITICELSADASKAITQSRIIFDGHEAHQTCEGPKFYKRNGYYYIFHPAGGVPTGWQVV
LRSKNVYGPYEWKTVLAQGNSPVNGPHQGGWVDTPTGEDWFMHFQDVGAYGRLVHLQPMKWVDDWPVIGIDKDGDGCGEP
VLTYKKPNVGKNYPICTPQESDEFDGYTLSPQWQWQANINEKWAYFNGGEGFVRLYSYPVPEDYKSLWDVSNLMLQKTPA
PNFTATTKLTFKPTEKYKGERTGLVVMGMDYAGLVVENTDNGLVLSQVECLKADRGGTEKVNASVPLKDGTIYLRAKFSA
KGDKIKASEGGHDLLVKCNLSYSTDGKKFQPLGETFQVKEGKWIGAKVGIFCTRPAIVTNDGGWTDADWFRIEK
>Mature_554_residues
MKRLITLCLLGGCFLSAPAQNYVSQAWVADQGNGTYKNPVLYADYSDPDVCRVGDDYYLTSSSFNCLPGLQILHSKDLVN
WTIIGAAVPYALPPVTDVRPEHGNRVWAPSIRHHNGEFYIFWGDPDQGAFMVKAKDPKGPWSEPVLVKAGKGIIDTTPLW
DDDGRVYLVHAYAGSRAGLKSVITICELSADASKAITQSRIIFDGHEAHQTCEGPKFYKRNGYYYIFHPAGGVPTGWQVV
LRSKNVYGPYEWKTVLAQGNSPVNGPHQGGWVDTPTGEDWFMHFQDVGAYGRLVHLQPMKWVDDWPVIGIDKDGDGCGEP
VLTYKKPNVGKNYPICTPQESDEFDGYTLSPQWQWQANINEKWAYFNGGEGFVRLYSYPVPEDYKSLWDVSNLMLQKTPA
PNFTATTKLTFKPTEKYKGERTGLVVMGMDYAGLVVENTDNGLVLSQVECLKADRGGTEKVNASVPLKDGTIYLRAKFSA
KGDKIKASEGGHDLLVKCNLSYSTDGKKFQPLGETFQVKEGKWIGAKVGIFCTRPAIVTNDGGWTDADWFRIEK

Specific function: Unknown

COG id: COG3507

COG function: function code G; Beta-xylosidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

Organism=Escherichia coli, GI1786467, Length=567, Percent_Identity=24.8677248677249, Blast_Score=142, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR006710 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.37 [H]

Molecular weight: Translated: 61565; Mature: 61565

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLITLCLLGGCFLSAPAQNYVSQAWVADQGNGTYKNPVLYADYSDPDVCRVGDDYYLT
CHHHEEEHHHCCHHCCCCHHHHHHHEEEEECCCCCCCCCEEEEECCCCCEEEECCCEEEE
SSSFNCLPGLQILHSKDLVNWTIIGAAVPYALPPVTDVRPEHGNRVWAPSIRHHNGEFYI
CCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCEECCCEEEE
FWGDPDQGAFMVKAKDPKGPWSEPVLVKAGKGIIDTTPLWDDDGRVYLVHAYAGSRAGLK
EECCCCCCEEEEEECCCCCCCCCCEEEECCCCCEECCCCCCCCCCEEEEEEECCCCCCHH
SVITICELSADASKAITQSRIIFDGHEAHQTCEGPKFYKRNGYYYIFHPAGGVPTGWQVV
HHHHHHCCCCCHHHHHHHEEEEECCCHHHHCCCCCCEEECCCEEEEEECCCCCCCCEEEE
LRSKNVYGPYEWKTVLAQGNSPVNGPHQGGWVDTPTGEDWFMHFQDVGAYGRLVHLQPMK
EECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCEEEEECCCC
WVDDWPVIGIDKDGDGCGEPVLTYKKPNVGKNYPICTPQESDEFDGYTLSPQWQWQANIN
CCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCC
EKWAYFNGGEGFVRLYSYPVPEDYKSLWDVSNLMLQKTPAPNFTATTKLTFKPTEKYKGE
CEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHEECCCCCCCEEEEEEEECCHHHCCCC
RTGLVVMGMDYAGLVVENTDNGLVLSQVECLKADRGGTEKVNASVPLKDGTIYLRAKFSA
CCCEEEEECCCCEEEEEECCCCEEEEEEHHHHCCCCCCCEEEEECEECCCEEEEEEEECC
KGDKIKASEGGHDLLVKCNLSYSTDGKKFQPLGETFQVKEGKWIGAKVGIFCTRPAIVTN
CCCEEEECCCCCEEEEEEECCCCCCCCEECCCCCEEEECCCEEEEEEEEEEEECCEEEEC
DGGWTDADWFRIEK
CCCCCCCCEEEECC
>Mature Secondary Structure
MKRLITLCLLGGCFLSAPAQNYVSQAWVADQGNGTYKNPVLYADYSDPDVCRVGDDYYLT
CHHHEEEHHHCCHHCCCCHHHHHHHEEEEECCCCCCCCCEEEEECCCCCEEEECCCEEEE
SSSFNCLPGLQILHSKDLVNWTIIGAAVPYALPPVTDVRPEHGNRVWAPSIRHHNGEFYI
CCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCEECCCEEEE
FWGDPDQGAFMVKAKDPKGPWSEPVLVKAGKGIIDTTPLWDDDGRVYLVHAYAGSRAGLK
EECCCCCCEEEEEECCCCCCCCCCEEEECCCCCEECCCCCCCCCCEEEEEEECCCCCCHH
SVITICELSADASKAITQSRIIFDGHEAHQTCEGPKFYKRNGYYYIFHPAGGVPTGWQVV
HHHHHHCCCCCHHHHHHHEEEEECCCHHHHCCCCCCEEECCCEEEEEECCCCCCCCEEEE
LRSKNVYGPYEWKTVLAQGNSPVNGPHQGGWVDTPTGEDWFMHFQDVGAYGRLVHLQPMK
EECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCEEEEECCCC
WVDDWPVIGIDKDGDGCGEPVLTYKKPNVGKNYPICTPQESDEFDGYTLSPQWQWQANIN
CCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCC
EKWAYFNGGEGFVRLYSYPVPEDYKSLWDVSNLMLQKTPAPNFTATTKLTFKPTEKYKGE
CEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHEECCCCCCCEEEEEEEECCHHHCCCC
RTGLVVMGMDYAGLVVENTDNGLVLSQVECLKADRGGTEKVNASVPLKDGTIYLRAKFSA
CCCEEEEECCCCEEEEEECCCCEEEEEEHHHHCCCCCCCEEEEECEECCCEEEEEEEECC
KGDKIKASEGGHDLLVKCNLSYSTDGKKFQPLGETFQVKEGKWIGAKVGIFCTRPAIVTN
CCCEEEECCCCCEEEEEEECCCCCCCCEECCCCCEEEECCCEEEEEEEEEEEECCEEEEC
DGGWTDADWFRIEK
CCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA